RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 TAF1LQ8IZX4 1826 aa12.26□□□□□ -0.45
NIP7P3-201ENST00000404319 DNAJC5GQ8N7S2 189 aa12.26□□□□□ -0.45
NIP7P3-201ENST00000404319 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
NIP7P3-201ENST00000404319 A0A0G2JLW4 131 aa12.25□□□□□ -0.45
NIP7P3-201ENST00000404319 RFC4P35249 363 aa12.25□□□□□ -0.45
NIP7P3-201ENST00000404319 FSTL1Q12841 308 aa12.25□□□□□ -0.45
NIP7P3-201ENST00000404319 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
NIP7P3-201ENST00000404319 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
NIP7P3-201ENST00000404319 PARP3Q9Y6F1 533 aa12.25□□□□□ -0.45
NIP7P3-201ENST00000404319 FCHSD2O94868 740 aa12.24□□□□□ -0.45
NIP7P3-201ENST00000404319 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
NIP7P3-201ENST00000404319 RC3H1Q5TC82 1133 aaKnown RBP12.24□□□□□ -0.45
NIP7P3-201ENST00000404319 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
NIP7P3-201ENST00000404319 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
NIP7P3-201ENST00000404319 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
NIP7P3-201ENST00000404319 PIM2Q9P1W9 311 aa12.23□□□□□ -0.45
NIP7P3-201ENST00000404319 WASHC2AQ641Q2 1341 aa12.22□□□□□ -0.45
NIP7P3-201ENST00000404319 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
NIP7P3-201ENST00000404319 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
NIP7P3-201ENST00000404319 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
NIP7P3-201ENST00000404319 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 ITGB4P16144 1822 aa12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 PHKG2P15735 406 aa12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 ITPK1Q13572 414 aa12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 DALRD3Q5D0E6 543 aaKnown RBP12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
NIP7P3-201ENST00000404319 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 DPEP1P16444 411 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 EYA1Q99502 592 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 NMRK2Q9NPI5 230 aa12.2□□□□□ -0.46
NIP7P3-201ENST00000404319 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
NIP7P3-201ENST00000404319 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
NIP7P3-201ENST00000404319 GYS1P13807 737 aa12.18□□□□□ -0.46
NIP7P3-201ENST00000404319 CABP4P57796 275 aa12.18□□□□□ -0.46
NIP7P3-201ENST00000404319 AMOTQ4VCS5 1084 aa12.18□□□□□ -0.46
NIP7P3-201ENST00000404319 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
NIP7P3-201ENST00000404319 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
NIP7P3-201ENST00000404319 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
NIP7P3-201ENST00000404319 RRAGCQ9HB90 399 aa12.17□□□□□ -0.46
NIP7P3-201ENST00000404319 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
NIP7P3-201ENST00000404319 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
NIP7P3-201ENST00000404319 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
NIP7P3-201ENST00000404319 RNF181Q9P0P0 153 aa12.16□□□□□ -0.46
NIP7P3-201ENST00000404319 PKD1L3Q7Z443 1732 aa12.16□□□□□ -0.46
NIP7P3-201ENST00000404319 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 ZPR1O75312 459 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 KCNA3P22001 575 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 MTHFSP49914 203 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 COL13A1Q5TAT6 717 aaPredicted RBP12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 MAP2P11137 1827 aaKnown RBP12.15□□□□□ -0.46
NIP7P3-201ENST00000404319 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
NIP7P3-201ENST00000404319 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
NIP7P3-201ENST00000404319 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
NIP7P3-201ENST00000404319 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
NIP7P3-201ENST00000404319 N4BP2Q86UW6 1770 aaPredicted RBP12.14□□□□□ -0.47
NIP7P3-201ENST00000404319 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
NIP7P3-201ENST00000404319 ZBTB22O15209 634 aa12.13□□□□□ -0.47
NIP7P3-201ENST00000404319 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
NIP7P3-201ENST00000404319 PRELPP51888 382 aa12.13□□□□□ -0.47
NIP7P3-201ENST00000404319 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
NIP7P3-201ENST00000404319 EIF4A2Q14240 407 aaKnown RBP12.12□□□□□ -0.47
NIP7P3-201ENST00000404319 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
NIP7P3-201ENST00000404319 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
NIP7P3-201ENST00000404319 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
NIP7P3-201ENST00000404319 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 CAPN15O75808 1086 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 LMNB1P20700 586 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
NIP7P3-201ENST00000404319 KDRP35968 1356 aa12.1□□□□□ -0.47
NIP7P3-201ENST00000404319 TM4SF1P30408 202 aa12.1□□□□□ -0.47
NIP7P3-201ENST00000404319 HTRA3P83110 453 aa12.1□□□□□ -0.47
NIP7P3-201ENST00000404319 FKBP8Q14318 412 aa12.1□□□□□ -0.47
NIP7P3-201ENST00000404319 PCNTO95613 3336 aa12.09□□□□□ -0.47
NIP7P3-201ENST00000404319 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
NIP7P3-201ENST00000404319 KCPQ6ZWJ8 1503 aa12.09□□□□□ -0.47
NIP7P3-201ENST00000404319 ARFGEF1Q9Y6D6 1849 aa12.09□□□□□ -0.47
NIP7P3-201ENST00000404319 H0YIN7 160 aa12.08□□□□□ -0.48
NIP7P3-201ENST00000404319 POLRMTO00411 1230 aaKnown RBP12.08□□□□□ -0.48
NIP7P3-201ENST00000404319 CHRNA5P30532 468 aa12.08□□□□□ -0.48
NIP7P3-201ENST00000404319 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
NIP7P3-201ENST00000404319 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
NIP7P3-201ENST00000404319 DDR1Q08345 913 aa12.07□□□□□ -0.48
NIP7P3-201ENST00000404319 POLR3GLQ9BT43 218 aa12.07□□□□□ -0.48
NIP7P3-201ENST00000404319 TIMELESSQ9UNS1 1208 aa12.07□□□□□ -0.48
NIP7P3-201ENST00000404319 KIAA1551Q9HCM1 1747 aa12.06□□□□□ -0.48
NIP7P3-201ENST00000404319 USPL1Q5W0Q7 1092 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms