RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ITPK1Q13572 414 aa16.96■□□□□ 0.31
PRAME-204ENST00000403441 GPBP1L1Q9HC44 474 aaPredicted RBP16.96■□□□□ 0.31
PRAME-204ENST00000403441 ADCY9O60503 1353 aa16.95■□□□□ 0.3
PRAME-204ENST00000403441 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
PRAME-204ENST00000403441 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
PRAME-204ENST00000403441 KDRP35968 1356 aa16.93■□□□□ 0.3
PRAME-204ENST00000403441 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
PRAME-204ENST00000403441 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
PRAME-204ENST00000403441 WWC3Q9ULE0 1092 aa16.93■□□□□ 0.3
PRAME-204ENST00000403441 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
PRAME-204ENST00000403441 MMP10P09238 476 aa16.92■□□□□ 0.3
PRAME-204ENST00000403441 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRAME-204ENST00000403441 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
PRAME-204ENST00000403441 RTCBQ9Y3I0 505 aaKnown RBP16.92■□□□□ 0.3
PRAME-204ENST00000403441 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
PRAME-204ENST00000403441 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
PRAME-204ENST00000403441 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
PRAME-204ENST00000403441 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
PRAME-204ENST00000403441 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
PRAME-204ENST00000403441 ADRA2BP18089 450 aa16.9■□□□□ 0.3
PRAME-204ENST00000403441 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
PRAME-204ENST00000403441 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
PRAME-204ENST00000403441 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
PRAME-204ENST00000403441 CABP4P57796 275 aa16.89■□□□□ 0.29
PRAME-204ENST00000403441 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
PRAME-204ENST00000403441 PANK3Q9H999 370 aa16.89■□□□□ 0.29
PRAME-204ENST00000403441 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
PRAME-204ENST00000403441 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
PRAME-204ENST00000403441 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
PRAME-204ENST00000403441 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
PRAME-204ENST00000403441 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
PRAME-204ENST00000403441 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
PRAME-204ENST00000403441 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
PRAME-204ENST00000403441 RFC4P35249 363 aa16.87■□□□□ 0.29
PRAME-204ENST00000403441 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
PRAME-204ENST00000403441 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
PRAME-204ENST00000403441 MTHFSP49914 203 aa16.86■□□□□ 0.29
PRAME-204ENST00000403441 TGFB2P61812 414 aa16.86■□□□□ 0.29
PRAME-204ENST00000403441 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
PRAME-204ENST00000403441 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
PRAME-204ENST00000403441 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
PRAME-204ENST00000403441 RPS6KA4O75676 772 aa16.85■□□□□ 0.29
PRAME-204ENST00000403441 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
PRAME-204ENST00000403441 GYS1P13807 737 aa16.84■□□□□ 0.29
PRAME-204ENST00000403441 HSPA6P17066 643 aa16.84■□□□□ 0.29
PRAME-204ENST00000403441 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
PRAME-204ENST00000403441 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
PRAME-204ENST00000403441 KIAA1551Q9HCM1 1747 aa16.84■□□□□ 0.29
PRAME-204ENST00000403441 N4BP2Q86UW6 1770 aaPredicted RBP16.84■□□□□ 0.29
PRAME-204ENST00000403441 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
PRAME-204ENST00000403441 PTCD1O75127 700 aaKnown RBP16.83■□□□□ 0.28
PRAME-204ENST00000403441 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
PRAME-204ENST00000403441 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
PRAME-204ENST00000403441 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
PRAME-204ENST00000403441 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
PRAME-204ENST00000403441 NFATC2IPQ8NCF5 419 aa16.81■□□□□ 0.28
PRAME-204ENST00000403441 DPEP1P16444 411 aa16.8■□□□□ 0.28
PRAME-204ENST00000403441 ARHGAP27Q6ZUM4 889 aa16.8■□□□□ 0.28
PRAME-204ENST00000403441 MYH14Q7Z406 1995 aaKnown RBP16.79■□□□□ 0.28
PRAME-204ENST00000403441 KIF3CO14782 793 aa16.79■□□□□ 0.28
PRAME-204ENST00000403441 FCHSD2O94868 740 aa16.79■□□□□ 0.28
PRAME-204ENST00000403441 TJP1Q07157 1748 aa16.79■□□□□ 0.28
PRAME-204ENST00000403441 USP42Q9H9J4 1324 aaKnown RBP16.78■□□□□ 0.28
PRAME-204ENST00000403441 IL13P35225 146 aa16.78■□□□□ 0.28
PRAME-204ENST00000403441 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.28
PRAME-204ENST00000403441 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
PRAME-204ENST00000403441 BRCA1P38398 1863 aaKnown RBP16.77■□□□□ 0.27
PRAME-204ENST00000403441 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
PRAME-204ENST00000403441 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
PRAME-204ENST00000403441 FKBP8Q14318 412 aa16.75■□□□□ 0.27
PRAME-204ENST00000403441 IFFO2Q5TF58 517 aa16.75■□□□□ 0.27
PRAME-204ENST00000403441 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
PRAME-204ENST00000403441 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
PRAME-204ENST00000403441 MRC1P22897 1456 aa16.74■□□□□ 0.27
PRAME-204ENST00000403441 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
PRAME-204ENST00000403441 ZPR1O75312 459 aa16.74■□□□□ 0.27
PRAME-204ENST00000403441 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
PRAME-204ENST00000403441 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
PRAME-204ENST00000403441 TOMM70O94826 608 aa16.73■□□□□ 0.27
PRAME-204ENST00000403441 APLP1P51693 650 aa16.73■□□□□ 0.27
PRAME-204ENST00000403441 DDR1Q08345 913 aa16.73■□□□□ 0.27
PRAME-204ENST00000403441 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
PRAME-204ENST00000403441 KCNA3P22001 575 aa16.72■□□□□ 0.27
PRAME-204ENST00000403441 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
PRAME-204ENST00000403441 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
PRAME-204ENST00000403441 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
PRAME-204ENST00000403441 NMRK2Q9NPI5 230 aa16.71■□□□□ 0.27
PRAME-204ENST00000403441 ADAMTS7Q9UKP4 1686 aa16.71■□□□□ 0.27
PRAME-204ENST00000403441 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
PRAME-204ENST00000403441 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
PRAME-204ENST00000403441 HMOX1P09601 288 aa16.7■□□□□ 0.26
PRAME-204ENST00000403441 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
PRAME-204ENST00000403441 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
PRAME-204ENST00000403441 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
PRAME-204ENST00000403441 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
PRAME-204ENST00000403441 COL15A1P39059 1388 aa16.69■□□□□ 0.26
PRAME-204ENST00000403441 CYP19A1P11511 503 aaPredicted RBP16.69■□□□□ 0.26
PRAME-204ENST00000403441 TM4SF1P30408 202 aa16.69■□□□□ 0.26
PRAME-204ENST00000403441 CHRNA5P30532 468 aa16.69■□□□□ 0.26
PRAME-204ENST00000403441 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms