RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 PCDH11YQ9BZA8 1340 aa21.82■■□□□ 1.08
CSNK2A1-203ENST00000400217 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
CSNK2A1-203ENST00000400217 FTSJ3Q8IY81 847 aaKnown RBP21.82■■□□□ 1.08
CSNK2A1-203ENST00000400217 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
CSNK2A1-203ENST00000400217 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
CSNK2A1-203ENST00000400217 SCN11AQ9UI33 1791 aa21.81■■□□□ 1.08
CSNK2A1-203ENST00000400217 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
CSNK2A1-203ENST00000400217 KDM3BQ7LBC6 1761 aa21.79■■□□□ 1.08
CSNK2A1-203ENST00000400217 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
CSNK2A1-203ENST00000400217 PELP1Q8IZL8 1130 aaKnown RBP21.79■■□□□ 1.08
CSNK2A1-203ENST00000400217 SLC52A2Q9HAB3 445 aa21.79■■□□□ 1.08
CSNK2A1-203ENST00000400217 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
CSNK2A1-203ENST00000400217 KCNQ3O43525 872 aa21.77■■□□□ 1.08
CSNK2A1-203ENST00000400217 AAMPQ13685 434 aa21.77■■□□□ 1.08
CSNK2A1-203ENST00000400217 MVPQ14764 893 aaKnown RBP21.77■■□□□ 1.07
CSNK2A1-203ENST00000400217 NKX1-1Q15270 411 aaPredicted RBP21.77■■□□□ 1.07
CSNK2A1-203ENST00000400217 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.07
CSNK2A1-203ENST00000400217 HOXB7P09629 217 aa21.76■■□□□ 1.07
CSNK2A1-203ENST00000400217 NFATC2IPQ8NCF5 419 aa21.76■■□□□ 1.07
CSNK2A1-203ENST00000400217 DISP2A7MBM2 1401 aa21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 SLC4A2P04920 1241 aa21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 NRAPQ86VF7 1730 aa21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 DDX54Q8TDD1 881 aaKnown RBP21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 CHMP4AQ9BY43 222 aa21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 API5Q9BZZ5 524 aaKnown RBP21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 SLIT2O94813 1529 aa21.75■■□□□ 1.07
CSNK2A1-203ENST00000400217 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
CSNK2A1-203ENST00000400217 CABP4P57796 275 aa21.74■■□□□ 1.07
CSNK2A1-203ENST00000400217 STK31Q9BXU1 1019 aa21.74■■□□□ 1.07
CSNK2A1-203ENST00000400217 MRC1P22897 1456 aa21.74■■□□□ 1.07
CSNK2A1-203ENST00000400217 TMEM57Q8N5G2 664 aa21.73■■□□□ 1.07
CSNK2A1-203ENST00000400217 THRAP3Q9Y2W1 955 aaKnown RBP21.73■■□□□ 1.07
CSNK2A1-203ENST00000400217 NWD2Q9ULI1 1742 aa21.73■■□□□ 1.07
CSNK2A1-203ENST00000400217 SHANK3Q9BYB0 1731 aa21.72■■□□□ 1.07
CSNK2A1-203ENST00000400217 ITPRIPQ8IWB1 547 aa21.72■■□□□ 1.07
CSNK2A1-203ENST00000400217 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
CSNK2A1-203ENST00000400217 PTPRCP08575 1304 aa21.72■■□□□ 1.07
CSNK2A1-203ENST00000400217 SPATA31A1Q5TZJ5 1347 aa21.72■■□□□ 1.07
CSNK2A1-203ENST00000400217 ERVV-2B6SEH9 535 aa21.71■■□□□ 1.07
CSNK2A1-203ENST00000400217 ZNF790Q6PG37 636 aa21.71■■□□□ 1.07
CSNK2A1-203ENST00000400217 CDCA7Q9BWT1 371 aaPredicted RBP21.71■■□□□ 1.07
CSNK2A1-203ENST00000400217 HEG1Q9ULI3 1381 aa21.71■■□□□ 1.07
CSNK2A1-203ENST00000400217 HSPA1LP34931 641 aa21.71■■□□□ 1.07
CSNK2A1-203ENST00000400217 HDGFL1Q5TGJ6 251 aa21.71■■□□□ 1.07
CSNK2A1-203ENST00000400217 ABCC4O15439 1325 aa21.7■■□□□ 1.06
CSNK2A1-203ENST00000400217 GIGYF1O75420 1035 aaPredicted RBP21.7■■□□□ 1.06
CSNK2A1-203ENST00000400217 NECTIN2Q92692 538 aa21.7■■□□□ 1.06
CSNK2A1-203ENST00000400217 NGLY1Q96IV0 654 aa21.7■■□□□ 1.06
CSNK2A1-203ENST00000400217 SPATA31A5Q5VU36 1347 aa21.69■■□□□ 1.06
CSNK2A1-203ENST00000400217 SPATA31A7Q8IWB4 1347 aa21.69■■□□□ 1.06
CSNK2A1-203ENST00000400217 EXOC5O00471 708 aa21.69■■□□□ 1.06
CSNK2A1-203ENST00000400217 SLC39A6Q13433 755 aa21.69■■□□□ 1.06
CSNK2A1-203ENST00000400217 UNC5CLQ8IV45 518 aa21.69■■□□□ 1.06
CSNK2A1-203ENST00000400217 C8orf37Q96NL8 207 aa21.69■■□□□ 1.06
CSNK2A1-203ENST00000400217 EIF2S2P20042 333 aaKnown RBP21.68■■□□□ 1.06
CSNK2A1-203ENST00000400217 CACNA1FO60840 1977 aa21.67■■□□□ 1.06
CSNK2A1-203ENST00000400217 G2E3Q7L622 706 aa21.67■■□□□ 1.06
CSNK2A1-203ENST00000400217 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
CSNK2A1-203ENST00000400217 CCDC9Q9Y3X0 531 aaKnown RBP21.66■■□□□ 1.06
CSNK2A1-203ENST00000400217 WNK3Q9BYP7 1800 aa21.66■■□□□ 1.06
CSNK2A1-203ENST00000400217 FNBP4Q8N3X1 1017 aaPredicted RBP21.65■■□□□ 1.06
CSNK2A1-203ENST00000400217 CHMP4BQ9H444 224 aaKnown RBP21.65■■□□□ 1.06
CSNK2A1-203ENST00000400217 BARGINQ6ZT62 677 aa21.64■■□□□ 1.06
CSNK2A1-203ENST00000400217 RGS12O14924 1447 aa21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 FLIIQ13045 1269 aa21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 INTS3Q68E01 1043 aaKnown RBP21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 ZBTB40Q9NUA8 1239 aa21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 LRP6O75581 1613 aa21.64■■□□□ 1.05
CSNK2A1-203ENST00000400217 KDM2BQ8NHM5 1336 aa21.63■■□□□ 1.05
CSNK2A1-203ENST00000400217 VPS72Q15906 364 aa21.63■■□□□ 1.05
CSNK2A1-203ENST00000400217 ZNF496Q96IT1 587 aaPredicted RBP21.63■■□□□ 1.05
CSNK2A1-203ENST00000400217 FMNL2Q96PY5 1086 aa21.63■■□□□ 1.05
CSNK2A1-203ENST00000400217 TNS2Q63HR2 1409 aa21.62■■□□□ 1.05
CSNK2A1-203ENST00000400217 ZBTB7BO15156 539 aaPredicted RBP21.62■■□□□ 1.05
CSNK2A1-203ENST00000400217 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
CSNK2A1-203ENST00000400217 PCDHB15Q9Y5E8 787 aa21.62■■□□□ 1.05
CSNK2A1-203ENST00000400217 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
CSNK2A1-203ENST00000400217 SNRPA1P09661 255 aaKnown RBP21.61■■□□□ 1.05
CSNK2A1-203ENST00000400217 DDB1Q16531 1140 aa21.61■■□□□ 1.05
CSNK2A1-203ENST00000400217 DBF4Q9UBU7 674 aaPredicted RBP21.61■■□□□ 1.05
CSNK2A1-203ENST00000400217 FKBP5Q13451 457 aaPredicted RBP21.6■■□□□ 1.05
CSNK2A1-203ENST00000400217 TMOD3Q9NYL9 352 aa21.6■■□□□ 1.05
CSNK2A1-203ENST00000400217 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
CSNK2A1-203ENST00000400217 USP21Q9UK80 565 aa21.59■■□□□ 1.05
CSNK2A1-203ENST00000400217 IGHDP01880 384 aa21.58■■□□□ 1.05
CSNK2A1-203ENST00000400217 PHAXQ9H814 394 aaKnown RBP21.58■■□□□ 1.05
CSNK2A1-203ENST00000400217 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.05
CSNK2A1-203ENST00000400217 F6X3S4 739 aa21.58■■□□□ 1.04
CSNK2A1-203ENST00000400217 CCT4P50991 539 aaKnown RBP21.57■■□□□ 1.04
CSNK2A1-203ENST00000400217 RWDD1Q9H446 243 aaPredicted RBP21.57■■□□□ 1.04
CSNK2A1-203ENST00000400217 SLC4A10Q6U841 1118 aa21.56■■□□□ 1.04
CSNK2A1-203ENST00000400217 PIGBQ92521 554 aa21.56■■□□□ 1.04
CSNK2A1-203ENST00000400217 DDX21Q9NR30 783 aaKnown RBP eCLIP21.56■■□□□ 1.04
CSNK2A1-203ENST00000400217 HYPKQ9NX55 129 aa21.56■■□□□ 1.04
CSNK2A1-203ENST00000400217 ANXA1P04083 346 aa21.55■■□□□ 1.04
CSNK2A1-203ENST00000400217 C5P01031 1676 aa21.55■■□□□ 1.04
CSNK2A1-203ENST00000400217 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
CSNK2A1-203ENST00000400217 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms