RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 CCDC30Q5VVM6 783 aa10.94□□□□□ -0.66
LINC02449-202ENST00000399866 TOM1L2Q6ZVM7 507 aa10.94□□□□□ -0.66
LINC02449-202ENST00000399866 SKAP1Q86WV1 359 aa10.94□□□□□ -0.66
LINC02449-202ENST00000399866 STK31Q9BXU1 1019 aa10.94□□□□□ -0.66
LINC02449-202ENST00000399866 CHMP4BQ9H444 224 aaKnown RBP10.94□□□□□ -0.66
LINC02449-202ENST00000399866 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
LINC02449-202ENST00000399866 N4BP2Q86UW6 1770 aaPredicted RBP10.94□□□□□ -0.66
LINC02449-202ENST00000399866 SHANK3Q9BYB0 1731 aa10.94□□□□□ -0.66
LINC02449-202ENST00000399866 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
LINC02449-202ENST00000399866 BTBD11A6QL63 1104 aa10.93□□□□□ -0.66
LINC02449-202ENST00000399866 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
LINC02449-202ENST00000399866 HOXB7P09629 217 aa10.93□□□□□ -0.66
LINC02449-202ENST00000399866 INTS3Q68E01 1043 aaKnown RBP10.93□□□□□ -0.66
LINC02449-202ENST00000399866 IFNL2Q8IZJ0 200 aa10.93□□□□□ -0.66
LINC02449-202ENST00000399866 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
LINC02449-202ENST00000399866 ZBTB7BO15156 539 aaPredicted RBP10.92□□□□□ -0.66
LINC02449-202ENST00000399866 KCNQ3O43525 872 aa10.92□□□□□ -0.66
LINC02449-202ENST00000399866 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
LINC02449-202ENST00000399866 LARP1Q6PKG0 1096 aaKnown RBP10.92□□□□□ -0.66
LINC02449-202ENST00000399866 G2E3Q7L622 706 aa10.92□□□□□ -0.66
LINC02449-202ENST00000399866 PXDNLA1KZ92 1463 aa10.92□□□□□ -0.66
LINC02449-202ENST00000399866 HEG1Q9ULI3 1381 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 WNK3Q9BYP7 1800 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 PCDH11XQ9BZA7 1347 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 PCDH11YQ9BZA8 1340 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 CYP27B1O15528 508 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 HDGFL1Q5TGJ6 251 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 SLC52A2Q9HAB3 445 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 RBM19Q9Y4C8 960 aaKnown RBP10.91□□□□□ -0.66
LINC02449-202ENST00000399866 C5P01031 1676 aa10.91□□□□□ -0.66
LINC02449-202ENST00000399866 NRAPQ86VF7 1730 aa10.9□□□□□ -0.66
LINC02449-202ENST00000399866 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
LINC02449-202ENST00000399866 IL2RBP14784 551 aa10.9□□□□□ -0.66
LINC02449-202ENST00000399866 EVA1CP58658 441 aa10.9□□□□□ -0.66
LINC02449-202ENST00000399866 FLIIQ13045 1269 aa10.9□□□□□ -0.66
LINC02449-202ENST00000399866 NECTIN2Q92692 538 aa10.9□□□□□ -0.66
LINC02449-202ENST00000399866 PAPPAQ13219 1627 aa10.9□□□□□ -0.66
LINC02449-202ENST00000399866 GLI3P10071 1580 aa10.9□□□□□ -0.67
LINC02449-202ENST00000399866 TOM1O60784 492 aa10.89□□□□□ -0.67
LINC02449-202ENST00000399866 AEBP2Q6ZN18 517 aaPredicted RBP10.89□□□□□ -0.67
LINC02449-202ENST00000399866 ZCRB1Q8TBF4 217 aaKnown RBP10.89□□□□□ -0.67
LINC02449-202ENST00000399866 CHMP4AQ9BY43 222 aa10.89□□□□□ -0.67
LINC02449-202ENST00000399866 BTG4Q9NY30 223 aa10.89□□□□□ -0.67
LINC02449-202ENST00000399866 DISP2A7MBM2 1401 aa10.89□□□□□ -0.67
LINC02449-202ENST00000399866 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
LINC02449-202ENST00000399866 ATP10DQ9P241 1426 aa10.88□□□□□ -0.67
LINC02449-202ENST00000399866 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
LINC02449-202ENST00000399866 CACNA1FO60840 1977 aa10.88□□□□□ -0.67
LINC02449-202ENST00000399866 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
LINC02449-202ENST00000399866 F6X3S4 739 aa10.87□□□□□ -0.67
LINC02449-202ENST00000399866 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
LINC02449-202ENST00000399866 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
LINC02449-202ENST00000399866 RGS3P49796 1198 aa10.87□□□□□ -0.67
LINC02449-202ENST00000399866 CCT4P50991 539 aaKnown RBP10.87□□□□□ -0.67
LINC02449-202ENST00000399866 FKBP5Q13451 457 aaPredicted RBP10.87□□□□□ -0.67
LINC02449-202ENST00000399866 CHPF2Q9P2E5 772 aa10.87□□□□□ -0.67
LINC02449-202ENST00000399866 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
LINC02449-202ENST00000399866 UBR2Q8IWV8 1755 aa10.87□□□□□ -0.67
LINC02449-202ENST00000399866 PIP4K2BP78356 416 aa10.86□□□□□ -0.67
LINC02449-202ENST00000399866 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
LINC02449-202ENST00000399866 ZNF790Q6PG37 636 aa10.86□□□□□ -0.67
LINC02449-202ENST00000399866 SLC4A10Q6U841 1118 aa10.86□□□□□ -0.67
LINC02449-202ENST00000399866 SMC5Q8IY18 1101 aa10.86□□□□□ -0.67
LINC02449-202ENST00000399866 NFATC2IPQ8NCF5 419 aa10.86□□□□□ -0.67
LINC02449-202ENST00000399866 NWD2Q9ULI1 1742 aa10.86□□□□□ -0.67
LINC02449-202ENST00000399866 LRP6O75581 1613 aa10.85□□□□□ -0.67
LINC02449-202ENST00000399866 UBAP1LF5GYI3 381 aa10.85□□□□□ -0.67
LINC02449-202ENST00000399866 PDE4AP27815 886 aa10.85□□□□□ -0.67
LINC02449-202ENST00000399866 CABP4P57796 275 aa10.85□□□□□ -0.67
LINC02449-202ENST00000399866 SLC39A6Q13433 755 aa10.85□□□□□ -0.67
LINC02449-202ENST00000399866 MEIS3Q99687 375 aa10.85□□□□□ -0.67
LINC02449-202ENST00000399866 PHAXQ9H814 394 aaKnown RBP10.85□□□□□ -0.67
LINC02449-202ENST00000399866 DBF4Q9UBU7 674 aaPredicted RBP10.85□□□□□ -0.67
LINC02449-202ENST00000399866 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 ERVV-2B6SEH9 535 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 TNS2Q63HR2 1409 aa10.84□□□□□ -0.67
LINC02449-202ENST00000399866 ADCY9O60503 1353 aa10.83□□□□□ -0.68
LINC02449-202ENST00000399866 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
LINC02449-202ENST00000399866 ANKRD44Q8N8A2 993 aa10.83□□□□□ -0.68
LINC02449-202ENST00000399866 DDX54Q8TDD1 881 aaKnown RBP10.83□□□□□ -0.68
LINC02449-202ENST00000399866 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
LINC02449-202ENST00000399866 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
LINC02449-202ENST00000399866 FMNL2Q96PY5 1086 aa10.83□□□□□ -0.68
LINC02449-202ENST00000399866 USP35Q9P2H5 1018 aa10.83□□□□□ -0.68
LINC02449-202ENST00000399866 ANXA1P04083 346 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 NUCB1Q02818 461 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 PROSER3Q2NL68 480 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 CEP85Q6P2H3 762 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 HYPKQ9NX55 129 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 SLIT2O94813 1529 aa10.82□□□□□ -0.68
LINC02449-202ENST00000399866 NUTM2BA6NNL0 878 aaPredicted RBP10.81□□□□□ -0.68
LINC02449-202ENST00000399866 NUTM2EB1AL46 878 aaPredicted RBP10.81□□□□□ -0.68
LINC02449-202ENST00000399866 GNAI3P08754 354 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms