RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
RFPL3-202ENST00000397468 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
RFPL3-202ENST00000397468 COL24A1Q17RW2 1714 aa13.33□□□□□ -0.28
RFPL3-202ENST00000397468 CYP27B1O15528 508 aa13.32□□□□□ -0.28
RFPL3-202ENST00000397468 FLAD1Q8NFF5 587 aa13.32□□□□□ -0.28
RFPL3-202ENST00000397468 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
RFPL3-202ENST00000397468 PHF14O94880 888 aa13.31□□□□□ -0.28
RFPL3-202ENST00000397468 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
RFPL3-202ENST00000397468 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
RFPL3-202ENST00000397468 WASHC2AQ641Q2 1341 aa13.31□□□□□ -0.28
RFPL3-202ENST00000397468 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
RFPL3-202ENST00000397468 EYA1Q99502 592 aa13.3□□□□□ -0.28
RFPL3-202ENST00000397468 GOLGB1Q14789 3259 aaKnown RBP13.3□□□□□ -0.28
RFPL3-202ENST00000397468 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
RFPL3-202ENST00000397468 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
RFPL3-202ENST00000397468 NLGN2Q8NFZ4 835 aa13.29□□□□□ -0.28
RFPL3-202ENST00000397468 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
RFPL3-202ENST00000397468 PIGBQ92521 554 aa13.28□□□□□ -0.28
RFPL3-202ENST00000397468 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
RFPL3-202ENST00000397468 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
RFPL3-202ENST00000397468 PANK3Q9H999 370 aa13.27□□□□□ -0.29
RFPL3-202ENST00000397468 NCAPD2Q15021 1401 aa13.27□□□□□ -0.29
RFPL3-202ENST00000397468 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
RFPL3-202ENST00000397468 SIK1P57059 783 aa13.26□□□□□ -0.29
RFPL3-202ENST00000397468 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
RFPL3-202ENST00000397468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
RFPL3-202ENST00000397468 GNPATO15228 680 aa13.25□□□□□ -0.29
RFPL3-202ENST00000397468 GRIN3BO60391 1043 aa13.25□□□□□ -0.29
RFPL3-202ENST00000397468 PHKG2P15735 406 aa13.25□□□□□ -0.29
RFPL3-202ENST00000397468 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
RFPL3-202ENST00000397468 NKX1-1Q15270 411 aaPredicted RBP13.25□□□□□ -0.29
RFPL3-202ENST00000397468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
RFPL3-202ENST00000397468 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
RFPL3-202ENST00000397468 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
RFPL3-202ENST00000397468 ZNF530Q6P9A1 599 aaPredicted RBP13.24□□□□□ -0.29
RFPL3-202ENST00000397468 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
RFPL3-202ENST00000397468 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
RFPL3-202ENST00000397468 SSFA2P28290 1259 aa13.23□□□□□ -0.29
RFPL3-202ENST00000397468 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
RFPL3-202ENST00000397468 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
RFPL3-202ENST00000397468 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
RFPL3-202ENST00000397468 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
RFPL3-202ENST00000397468 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
RFPL3-202ENST00000397468 LINC00116Q8NCU8 138 aa13.22□□□□□ -0.29
RFPL3-202ENST00000397468 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
RFPL3-202ENST00000397468 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
RFPL3-202ENST00000397468 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
RFPL3-202ENST00000397468 CABP4P57796 275 aa13.21□□□□□ -0.29
RFPL3-202ENST00000397468 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.29
RFPL3-202ENST00000397468 DCAF5Q96JK2 942 aa13.21□□□□□ -0.29
RFPL3-202ENST00000397468 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
RFPL3-202ENST00000397468 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
RFPL3-202ENST00000397468 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
RFPL3-202ENST00000397468 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
RFPL3-202ENST00000397468 MTHFSP49914 203 aa13.19□□□□□ -0.3
RFPL3-202ENST00000397468 ITPK1Q13572 414 aa13.19□□□□□ -0.3
RFPL3-202ENST00000397468 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
RFPL3-202ENST00000397468 C1QTNF8P60827 252 aa13.18□□□□□ -0.3
RFPL3-202ENST00000397468 EVX2Q03828 476 aa13.18□□□□□ -0.3
RFPL3-202ENST00000397468 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
RFPL3-202ENST00000397468 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
RFPL3-202ENST00000397468 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
RFPL3-202ENST00000397468 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
RFPL3-202ENST00000397468 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
RFPL3-202ENST00000397468 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
RFPL3-202ENST00000397468 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
RFPL3-202ENST00000397468 MMP10P09238 476 aa13.16□□□□□ -0.3
RFPL3-202ENST00000397468 RFC4P35249 363 aa13.16□□□□□ -0.3
RFPL3-202ENST00000397468 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
RFPL3-202ENST00000397468 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
RFPL3-202ENST00000397468 KDRP35968 1356 aa13.16□□□□□ -0.3
RFPL3-202ENST00000397468 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
RFPL3-202ENST00000397468 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
RFPL3-202ENST00000397468 ATP10DQ9P241 1426 aa13.15□□□□□ -0.3
RFPL3-202ENST00000397468 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
RFPL3-202ENST00000397468 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
RFPL3-202ENST00000397468 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.3
RFPL3-202ENST00000397468 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
RFPL3-202ENST00000397468 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
RFPL3-202ENST00000397468 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
RFPL3-202ENST00000397468 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
RFPL3-202ENST00000397468 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
RFPL3-202ENST00000397468 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
RFPL3-202ENST00000397468 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
RFPL3-202ENST00000397468 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
RFPL3-202ENST00000397468 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
RFPL3-202ENST00000397468 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
RFPL3-202ENST00000397468 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
RFPL3-202ENST00000397468 HMOX1P09601 288 aa13.12□□□□□ -0.31
RFPL3-202ENST00000397468 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
RFPL3-202ENST00000397468 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
RFPL3-202ENST00000397468 IL13P35225 146 aa13.11□□□□□ -0.31
RFPL3-202ENST00000397468 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
RFPL3-202ENST00000397468 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
RFPL3-202ENST00000397468 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
RFPL3-202ENST00000397468 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
RFPL3-202ENST00000397468 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
RFPL3-202ENST00000397468 TJP1Q07157 1748 aa13.1□□□□□ -0.31
RFPL3-202ENST00000397468 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
RFPL3-202ENST00000397468 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms