RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 GIGYF1O75420 1035 aaPredicted RBP22.17■■□□□ 1.14
DDR1-229ENST00000396342 ADRA2BP18089 450 aa22.17■■□□□ 1.14
DDR1-229ENST00000396342 RFC4P35249 363 aa22.17■■□□□ 1.14
DDR1-229ENST00000396342 NLGN1Q8N2Q7 840 aa22.17■■□□□ 1.14
DDR1-229ENST00000396342 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
DDR1-229ENST00000396342 MAP2P11137 1827 aaKnown RBP22.15■■□□□ 1.14
DDR1-229ENST00000396342 ITPK1Q13572 414 aa22.15■■□□□ 1.14
DDR1-229ENST00000396342 RC3H1Q5TC82 1133 aaKnown RBP22.15■■□□□ 1.14
DDR1-229ENST00000396342 C4BP0C0L5 1744 aa22.14■■□□□ 1.13
DDR1-229ENST00000396342 PTCD1O75127 700 aaKnown RBP22.13■■□□□ 1.13
DDR1-229ENST00000396342 KIF7Q2M1P5 1343 aa22.12■■□□□ 1.13
DDR1-229ENST00000396342 MMP10P09238 476 aa22.12■■□□□ 1.13
DDR1-229ENST00000396342 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
DDR1-229ENST00000396342 AKAP4Q5JQC9 854 aa22.12■■□□□ 1.13
DDR1-229ENST00000396342 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
DDR1-229ENST00000396342 NFATC2IPQ8NCF5 419 aa22.12■■□□□ 1.13
DDR1-229ENST00000396342 IL13P35225 146 aa22.11■■□□□ 1.13
DDR1-229ENST00000396342 C1QTNF8P60827 252 aa22.11■■□□□ 1.13
DDR1-229ENST00000396342 CCDC87Q9NVE4 849 aa22.11■■□□□ 1.13
DDR1-229ENST00000396342 PARP3Q9Y6F1 533 aa22.11■■□□□ 1.13
DDR1-229ENST00000396342 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
DDR1-229ENST00000396342 RPS6KA4O75676 772 aa22.1■■□□□ 1.13
DDR1-229ENST00000396342 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
DDR1-229ENST00000396342 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
DDR1-229ENST00000396342 CNTNAP4Q9C0A0 1308 aa22.09■■□□□ 1.13
DDR1-229ENST00000396342 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
DDR1-229ENST00000396342 SMIM5Q71RC9 77 aa22.09■■□□□ 1.13
DDR1-229ENST00000396342 TOGARAM1Q9Y4F4 1720 aa22.08■■□□□ 1.12
DDR1-229ENST00000396342 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.12
DDR1-229ENST00000396342 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
DDR1-229ENST00000396342 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
DDR1-229ENST00000396342 ITGB4P16144 1822 aa22.07■■□□□ 1.12
DDR1-229ENST00000396342 TGFB2P61812 414 aa22.06■■□□□ 1.12
DDR1-229ENST00000396342 AMIGO3Q86WK7 504 aa22.06■■□□□ 1.12
DDR1-229ENST00000396342 GPBP1L1Q9HC44 474 aaPredicted RBP22.06■■□□□ 1.12
DDR1-229ENST00000396342 KDRP35968 1356 aa22.05■■□□□ 1.12
DDR1-229ENST00000396342 HMOX1P09601 288 aa22.05■■□□□ 1.12
DDR1-229ENST00000396342 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
DDR1-229ENST00000396342 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
DDR1-229ENST00000396342 CHD4Q14839 1912 aa22.04■■□□□ 1.12
DDR1-229ENST00000396342 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
DDR1-229ENST00000396342 ZPR1O75312 459 aa22.04■■□□□ 1.12
DDR1-229ENST00000396342 CRKLP46109 303 aaKnown RBP22.04■■□□□ 1.12
DDR1-229ENST00000396342 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
DDR1-229ENST00000396342 TTC5Q8N0Z6 440 aa22.03■■□□□ 1.12
DDR1-229ENST00000396342 SLC52A2Q9HAB3 445 aa22.03■■□□□ 1.12
DDR1-229ENST00000396342 KDM6AO15550 1401 aaPredicted RBP22.03■■□□□ 1.12
DDR1-229ENST00000396342 TAF1LQ8IZX4 1826 aa22.01■■□□□ 1.11
DDR1-229ENST00000396342 NPM2Q86SE8 214 aaKnown RBP22.01■■□□□ 1.11
DDR1-229ENST00000396342 SLC4A9Q96Q91 983 aa22.01■■□□□ 1.11
DDR1-229ENST00000396342 BCS1LQ9Y276 419 aa22.01■■□□□ 1.11
DDR1-229ENST00000396342 GYS1P13807 737 aa22■■□□□ 1.11
DDR1-229ENST00000396342 RNMTO43148 476 aaKnown RBP21.99■■□□□ 1.11
DDR1-229ENST00000396342 TEFQ10587 303 aa21.99■■□□□ 1.11
DDR1-229ENST00000396342 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
DDR1-229ENST00000396342 GAS2L2Q8NHY3 880 aa21.98■■□□□ 1.11
DDR1-229ENST00000396342 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
DDR1-229ENST00000396342 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
DDR1-229ENST00000396342 PER1O15534 1290 aaPredicted RBP21.97■■□□□ 1.11
DDR1-229ENST00000396342 FCHSD2O94868 740 aa21.97■■□□□ 1.11
DDR1-229ENST00000396342 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
DDR1-229ENST00000396342 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
DDR1-229ENST00000396342 STARD3NLO95772 234 aa21.96■■□□□ 1.11
DDR1-229ENST00000396342 ARHGAP27Q6ZUM4 889 aa21.96■■□□□ 1.11
DDR1-229ENST00000396342 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
DDR1-229ENST00000396342 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
DDR1-229ENST00000396342 MTHFSDQ2M296 383 aaKnown RBP21.95■■□□□ 1.1
DDR1-229ENST00000396342 PIM2Q9P1W9 311 aa21.95■■□□□ 1.1
DDR1-229ENST00000396342 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
DDR1-229ENST00000396342 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
DDR1-229ENST00000396342 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
DDR1-229ENST00000396342 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
DDR1-229ENST00000396342 TEX13AQ9BXU3 409 aaPredicted RBP21.93■■□□□ 1.1
DDR1-229ENST00000396342 A0A087WZG4 1122 aa21.92■■□□□ 1.1
DDR1-229ENST00000396342 NEFMP07197 916 aa21.92■■□□□ 1.1
DDR1-229ENST00000396342 DPEP1P16444 411 aa21.92■■□□□ 1.1
DDR1-229ENST00000396342 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
DDR1-229ENST00000396342 DALRD3Q5D0E6 543 aaKnown RBP21.92■■□□□ 1.1
DDR1-229ENST00000396342 SRP68Q9UHB9 627 aaKnown RBP21.92■■□□□ 1.1
DDR1-229ENST00000396342 FKBP8Q14318 412 aa21.91■■□□□ 1.1
DDR1-229ENST00000396342 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
DDR1-229ENST00000396342 ZNF831Q5JPB2 1677 aa21.91■■□□□ 1.1
DDR1-229ENST00000396342 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
DDR1-229ENST00000396342 CYP19A1P11511 503 aaPredicted RBP21.9■■□□□ 1.1
DDR1-229ENST00000396342 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
DDR1-229ENST00000396342 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
DDR1-229ENST00000396342 USPL1Q5W0Q7 1092 aa21.89■■□□□ 1.09
DDR1-229ENST00000396342 PXDNLA1KZ92 1463 aa21.89■■□□□ 1.09
DDR1-229ENST00000396342 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
DDR1-229ENST00000396342 NARFQ9UHQ1 456 aa21.88■■□□□ 1.09
DDR1-229ENST00000396342 UTRNP46939 3433 aa21.87■■□□□ 1.09
DDR1-229ENST00000396342 SOS1Q07889 1333 aaPredicted RBP21.87■■□□□ 1.09
DDR1-229ENST00000396342 NPHP1O15259 732 aa21.87■■□□□ 1.09
DDR1-229ENST00000396342 ZNF330Q9Y3S2 320 aaPredicted RBP21.87■■□□□ 1.09
DDR1-229ENST00000396342 COL15A1P39059 1388 aa21.86■■□□□ 1.09
DDR1-229ENST00000396342 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
DDR1-229ENST00000396342 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
DDR1-229ENST00000396342 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
DDR1-229ENST00000396342 FMNL2Q96PY5 1086 aa21.85■■□□□ 1.09
DDR1-229ENST00000396342 ZNF790Q6PG37 636 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms