RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 WASF1Q92558 559 aa17■□□□□ 0.31
TRAK1-203ENST00000396175 STX6O43752 255 aa17■□□□□ 0.31
TRAK1-203ENST00000396175 BMS1Q14692 1282 aaKnown RBP17■□□□□ 0.31
TRAK1-203ENST00000396175 SHTN1A0MZ66 631 aa16.99■□□□□ 0.31
TRAK1-203ENST00000396175 MCM3P25205 808 aa16.99■□□□□ 0.31
TRAK1-203ENST00000396175 CASQ1P31415 396 aa16.99■□□□□ 0.31
TRAK1-203ENST00000396175 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
TRAK1-203ENST00000396175 CENPHQ9H3R5 247 aa16.99■□□□□ 0.31
TRAK1-203ENST00000396175 CTDP1Q9Y5B0 961 aaPredicted RBP16.99■□□□□ 0.31
TRAK1-203ENST00000396175 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
TRAK1-203ENST00000396175 TRMT1Q9NXH9 659 aaKnown RBP16.98■□□□□ 0.31
TRAK1-203ENST00000396175 ZNF165P49910 485 aa16.98■□□□□ 0.31
TRAK1-203ENST00000396175 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
TRAK1-203ENST00000396175 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
TRAK1-203ENST00000396175 KIAA1328Q86T90 577 aa16.98■□□□□ 0.31
TRAK1-203ENST00000396175 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
TRAK1-203ENST00000396175 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAK1-203ENST00000396175 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
TRAK1-203ENST00000396175 POLR3GO15318 223 aaPredicted RBP16.97■□□□□ 0.31
TRAK1-203ENST00000396175 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
TRAK1-203ENST00000396175 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
TRAK1-203ENST00000396175 FAM107BQ9H098 131 aa16.97■□□□□ 0.31
TRAK1-203ENST00000396175 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
TRAK1-203ENST00000396175 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
TRAK1-203ENST00000396175 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
TRAK1-203ENST00000396175 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
TRAK1-203ENST00000396175 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
TRAK1-203ENST00000396175 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
TRAK1-203ENST00000396175 EIF5P55010 431 aaKnown RBP16.96■□□□□ 0.31
TRAK1-203ENST00000396175 NUCB1Q02818 461 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
TRAK1-203ENST00000396175 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 CEP131Q9UPN4 1083 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 SYCP1Q15431 976 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 TXNDC2Q86VQ3 553 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 GTF2F1P35269 517 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRAK1-203ENST00000396175 STX1AQ16623 288 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 IMMTQ16891 758 aaKnown RBP16.96■□□□□ 0.31
TRAK1-203ENST00000396175 KRT222Q8N1A0 295 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 PCDHB15Q9Y5E8 787 aa16.96■□□□□ 0.31
TRAK1-203ENST00000396175 HMGB1P09429 215 aaKnown RBP16.95■□□□□ 0.3
TRAK1-203ENST00000396175 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAK1-203ENST00000396175 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 PCF11O94913 1555 aaKnown RBP16.95■□□□□ 0.3
TRAK1-203ENST00000396175 GOLGA6L9A6NEM1 432 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 ABCC5O15440 1437 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 IL16Q14005 1332 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 SNW1Q13573 536 aaKnown RBP16.95■□□□□ 0.3
TRAK1-203ENST00000396175 CEP135Q66GS9 1140 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 PLCD4Q9BRC7 762 aa16.95■□□□□ 0.3
TRAK1-203ENST00000396175 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
TRAK1-203ENST00000396175 ZRSR2Q15696 482 aaKnown RBP16.94■□□□□ 0.3
TRAK1-203ENST00000396175 CCDC57Q2TAC2 916 aa16.94■□□□□ 0.3
TRAK1-203ENST00000396175 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
TRAK1-203ENST00000396175 TIGD1Q96MW7 591 aa16.94■□□□□ 0.3
TRAK1-203ENST00000396175 PTPRCP08575 1304 aa16.94■□□□□ 0.3
TRAK1-203ENST00000396175 GJB2P29033 226 aa16.94■□□□□ 0.3
TRAK1-203ENST00000396175 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
TRAK1-203ENST00000396175 TAF4BQ92750 862 aa16.93■□□□□ 0.3
TRAK1-203ENST00000396175 C8orf76Q96K31 380 aa16.93■□□□□ 0.3
TRAK1-203ENST00000396175 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
TRAK1-203ENST00000396175 FSIP1Q8NA03 581 aa16.93■□□□□ 0.3
TRAK1-203ENST00000396175 GIMAP7Q8NHV1 300 aa16.93■□□□□ 0.3
TRAK1-203ENST00000396175 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
TRAK1-203ENST00000396175 ZNF397Q8NF99 534 aaPredicted RBP16.92■□□□□ 0.3
TRAK1-203ENST00000396175 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
TRAK1-203ENST00000396175 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
TRAK1-203ENST00000396175 NEFHP12036 1026 aa16.92■□□□□ 0.3
TRAK1-203ENST00000396175 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
TRAK1-203ENST00000396175 CCDC150Q8NCX0 1101 aa16.92■□□□□ 0.3
TRAK1-203ENST00000396175 TFIP11Q9UBB9 837 aaKnown RBP16.92■□□□□ 0.3
TRAK1-203ENST00000396175 MCM10Q7L590 875 aa16.92■□□□□ 0.3
TRAK1-203ENST00000396175 TRERF1Q96PN7 1200 aa16.92■□□□□ 0.3
TRAK1-203ENST00000396175 TMC6Q7Z403 805 aa16.91■□□□□ 0.3
TRAK1-203ENST00000396175 ARHGAP45Q92619 1136 aa16.91■□□□□ 0.3
TRAK1-203ENST00000396175 TAX1BP1Q86VP1 789 aa16.91■□□□□ 0.3
TRAK1-203ENST00000396175 ZSCAN22P10073 491 aaPredicted RBP16.91■□□□□ 0.3
TRAK1-203ENST00000396175 SPA17Q15506 151 aa16.91■□□□□ 0.3
TRAK1-203ENST00000396175 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
TRAK1-203ENST00000396175 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
TRAK1-203ENST00000396175 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
TRAK1-203ENST00000396175 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 FAM200AQ8TCP9 573 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
TRAK1-203ENST00000396175 MAPKBP1O60336 1514 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 NSD2O96028 1365 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 MYL6BP14649 208 aa16.9■□□□□ 0.3
TRAK1-203ENST00000396175 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
TRAK1-203ENST00000396175 ANAPC15P60006 121 aa16.89■□□□□ 0.29
TRAK1-203ENST00000396175 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
TRAK1-203ENST00000396175 MIS18AQ9NYP9 233 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms