RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ERC2O15083 957 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 IL17REQ8NFR9 667 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 ARID3AQ99856 593 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 MYO5BQ9ULV0 1848 aa17.6■□□□□ 0.41
SREBF1-205ENST00000395757 CPS1P31327 1500 aa17.6■□□□□ 0.41
SREBF1-205ENST00000395757 ABCC4O15439 1325 aa17.6■□□□□ 0.41
SREBF1-205ENST00000395757 ANKLE2Q86XL3 938 aa17.6■□□□□ 0.41
SREBF1-205ENST00000395757 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■■□□ 15.7
SREBF1-205ENST00000395757 MX1P20591 662 aa17.6■□□□□ 0.41
SREBF1-205ENST00000395757 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
SREBF1-205ENST00000395757 PDE1AP54750 535 aa17.59■□□□□ 0.41
SREBF1-205ENST00000395757 PA2G4Q9UQ80 394 aaKnown RBP17.59■□□□□ 0.41
SREBF1-205ENST00000395757 SPG7Q9UQ90 795 aa17.59■□□□□ 0.41
SREBF1-205ENST00000395757 CFAP74Q9C0B2 1584 aa17.59■□□□□ 0.41
SREBF1-205ENST00000395757 KIAA1210Q9ULL0 1709 aa17.59■□□□□ 0.41
SREBF1-205ENST00000395757 NBPF6Q5VWK0 638 aa17.59■□□□□ 0.41
SREBF1-205ENST00000395757 NBPF4Q96M43 638 aa17.59■□□□□ 0.41
SREBF1-205ENST00000395757 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.41
SREBF1-205ENST00000395757 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.41
SREBF1-205ENST00000395757 FOSBP53539 338 aa17.58■□□□□ 0.4
SREBF1-205ENST00000395757 RABEP1Q15276 862 aa17.58■□□□□ 0.4
SREBF1-205ENST00000395757 RIC3Q7Z5B4 369 aa17.58■□□□□ 0.4
SREBF1-205ENST00000395757 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.4
SREBF1-205ENST00000395757 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.4
SREBF1-205ENST00000395757 CWF19L2Q2TBE0 894 aaKnown RBP17.57■□□□□ 0.4
SREBF1-205ENST00000395757 DIAPH3Q9NSV4 1193 aa17.57■□□□□ 0.4
SREBF1-205ENST00000395757 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
SREBF1-205ENST00000395757 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
SREBF1-205ENST00000395757 CPA1P15085 419 aa17.56■□□□□ 0.4
SREBF1-205ENST00000395757 FLT4P35916 1363 aa17.56■□□□□ 0.4
SREBF1-205ENST00000395757 NBPF7P0C2Y1 421 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-205ENST00000395757 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
SREBF1-205ENST00000395757 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
SREBF1-205ENST00000395757 CCDC85AQ96PX6 553 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-205ENST00000395757 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
SREBF1-205ENST00000395757 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-205ENST00000395757 GRPEL1Q9HAV7 217 aa17.55■□□□□ 0.4
SREBF1-205ENST00000395757 PTPRCP08575 1304 aa17.54■□□□□ 0.4
SREBF1-205ENST00000395757 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
SREBF1-205ENST00000395757 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
SREBF1-205ENST00000395757 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
SREBF1-205ENST00000395757 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-205ENST00000395757 TCEANC2Q96MN5 208 aa17.54■□□□□ 0.4
SREBF1-205ENST00000395757 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
SREBF1-205ENST00000395757 UNC5CLQ8IV45 518 aa17.53■□□□□ 0.4
SREBF1-205ENST00000395757 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
SREBF1-205ENST00000395757 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
SREBF1-205ENST00000395757 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
SREBF1-205ENST00000395757 USP26Q9BXU7 913 aa17.53■□□□□ 0.4
SREBF1-205ENST00000395757 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
SREBF1-205ENST00000395757 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
SREBF1-205ENST00000395757 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
SREBF1-205ENST00000395757 DHX37Q8IY37 1157 aaKnown RBP17.51■□□□□ 0.39
SREBF1-205ENST00000395757 VPS37CA5D8V6 355 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-205ENST00000395757 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
SREBF1-205ENST00000395757 TBX22Q9Y458 520 aa17.51■□□□□ 0.39
SREBF1-205ENST00000395757 ATP5J2-PTCD1G3V325 749 aa17.51■□□□□ 0.39
SREBF1-205ENST00000395757 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
SREBF1-205ENST00000395757 AACSQ86V21 672 aa17.51■□□□□ 0.39
SREBF1-205ENST00000395757 CLASRPQ8N2M8 674 aaKnown RBP17.51■□□□□ 0.39
SREBF1-205ENST00000395757 ANKRD24Q8TF21 1146 aa17.51■□□□□ 0.39
SREBF1-205ENST00000395757 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
SREBF1-205ENST00000395757 ATP7BP35670 1465 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 PIK3R4Q99570 1358 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
SREBF1-205ENST00000395757 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 STRN4Q9NRL3 753 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 USP6P35125 1406 aa17.5■□□□□ 0.39
SREBF1-205ENST00000395757 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-205ENST00000395757 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
SREBF1-205ENST00000395757 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
SREBF1-205ENST00000395757 PREX1Q8TCU6 1659 aa17.49■□□□□ 0.39
SREBF1-205ENST00000395757 STK3Q13188 491 aa17.49■□□□□ 0.39
SREBF1-205ENST00000395757 MRE11P49959 708 aa17.49■□□□□ 0.39
SREBF1-205ENST00000395757 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
SREBF1-205ENST00000395757 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 GCP02774 474 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 ATF3P18847 181 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-205ENST00000395757 NUCB2P80303 420 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 NEUROD6Q96NK8 337 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 USP44Q9H0E7 712 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 CPSF1Q10570 1443 aaKnown RBP17.48■□□□□ 0.39
SREBF1-205ENST00000395757 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-205ENST00000395757 DNAJC2Q99543 621 aaKnown RBP17.48■□□□□ 0.39
SREBF1-205ENST00000395757 FIBPO43427 364 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 KIF2CQ99661 725 aa17.48■□□□□ 0.39
SREBF1-205ENST00000395757 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
SREBF1-205ENST00000395757 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
SREBF1-205ENST00000395757 GAS2L3Q86XJ1 694 aa17.47■□□□□ 0.39
SREBF1-205ENST00000395757 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
SREBF1-205ENST00000395757 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
SREBF1-205ENST00000395757 SYCE3A1L190 88 aa17.46■□□□□ 0.39
SREBF1-205ENST00000395757 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
SREBF1-205ENST00000395757 RRAGDQ9NQL2 400 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-205ENST00000395757 SBNO1A3KN83 1393 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms