RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.51
PTPN20-205ENST00000395721 SIK1P57059 783 aa11.9□□□□□ -0.51
PTPN20-205ENST00000395721 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-205ENST00000395721 KDRP35968 1356 aa11.89□□□□□ -0.51
PTPN20-205ENST00000395721 CABP4P57796 275 aa11.89□□□□□ -0.51
PTPN20-205ENST00000395721 SYT17Q9BSW7 474 aa11.89□□□□□ -0.51
PTPN20-205ENST00000395721 ASAP1Q9ULH1 1129 aa11.89□□□□□ -0.51
PTPN20-205ENST00000395721 C4BP0C0L5 1744 aa11.88□□□□□ -0.51
PTPN20-205ENST00000395721 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
PTPN20-205ENST00000395721 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
PTPN20-205ENST00000395721 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
PTPN20-205ENST00000395721 ATG3Q9NT62 314 aa11.88□□□□□ -0.51
PTPN20-205ENST00000395721 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-205ENST00000395721 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
PTPN20-205ENST00000395721 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
PTPN20-205ENST00000395721 PHF14O94880 888 aa11.86□□□□□ -0.51
PTPN20-205ENST00000395721 HMOX1P09601 288 aa11.86□□□□□ -0.51
PTPN20-205ENST00000395721 YY1P25490 414 aa11.86□□□□□ -0.51
PTPN20-205ENST00000395721 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
PTPN20-205ENST00000395721 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
PTPN20-205ENST00000395721 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
PTPN20-205ENST00000395721 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
PTPN20-205ENST00000395721 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
PTPN20-205ENST00000395721 GNPATO15228 680 aa11.85□□□□□ -0.51
PTPN20-205ENST00000395721 ITPK1Q13572 414 aa11.85□□□□□ -0.51
PTPN20-205ENST00000395721 AKAP4Q5JQC9 854 aa11.85□□□□□ -0.51
PTPN20-205ENST00000395721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
PTPN20-205ENST00000395721 U2SURPO15042 1029 aaKnown RBP11.84□□□□□ -0.51
PTPN20-205ENST00000395721 SSFA2P28290 1259 aa11.84□□□□□ -0.51
PTPN20-205ENST00000395721 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
PTPN20-205ENST00000395721 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
PTPN20-205ENST00000395721 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-205ENST00000395721 GPR162Q16538 588 aa11.83□□□□□ -0.52
PTPN20-205ENST00000395721 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
PTPN20-205ENST00000395721 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
PTPN20-205ENST00000395721 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
PTPN20-205ENST00000395721 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
PTPN20-205ENST00000395721 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
PTPN20-205ENST00000395721 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
PTPN20-205ENST00000395721 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
PTPN20-205ENST00000395721 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
PTPN20-205ENST00000395721 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
PTPN20-205ENST00000395721 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
PTPN20-205ENST00000395721 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
PTPN20-205ENST00000395721 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
PTPN20-205ENST00000395721 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
PTPN20-205ENST00000395721 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
PTPN20-205ENST00000395721 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
PTPN20-205ENST00000395721 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
PTPN20-205ENST00000395721 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
PTPN20-205ENST00000395721 ADRA2BP18089 450 aa11.79□□□□□ -0.52
PTPN20-205ENST00000395721 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
PTPN20-205ENST00000395721 MRC1P22897 1456 aa11.79□□□□□ -0.52
PTPN20-205ENST00000395721 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
PTPN20-205ENST00000395721 LGR6Q9HBX8 967 aa11.79□□□□□ -0.52
PTPN20-205ENST00000395721 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
PTPN20-205ENST00000395721 COL5A3P25940 1745 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-205ENST00000395721 RFC4P35249 363 aa11.77□□□□□ -0.53
PTPN20-205ENST00000395721 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
PTPN20-205ENST00000395721 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
PTPN20-205ENST00000395721 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-205ENST00000395721 PRKAR2BP31323 418 aa11.76□□□□□ -0.53
PTPN20-205ENST00000395721 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPN20-205ENST00000395721 TEFQ10587 303 aa11.76□□□□□ -0.53
PTPN20-205ENST00000395721 GNAT3A8MTJ3 354 aa11.76□□□□□ -0.53
PTPN20-205ENST00000395721 MMP10P09238 476 aa11.76□□□□□ -0.53
PTPN20-205ENST00000395721 NLGN1Q8N2Q7 840 aa11.76□□□□□ -0.53
PTPN20-205ENST00000395721 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
PTPN20-205ENST00000395721 TJP1Q07157 1748 aa11.76□□□□□ -0.53
PTPN20-205ENST00000395721 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
PTPN20-205ENST00000395721 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
PTPN20-205ENST00000395721 DNAJC10Q8IXB1 793 aa11.75□□□□□ -0.53
PTPN20-205ENST00000395721 TTC5Q8N0Z6 440 aa11.75□□□□□ -0.53
PTPN20-205ENST00000395721 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-205ENST00000395721 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
PTPN20-205ENST00000395721 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
PTPN20-205ENST00000395721 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
PTPN20-205ENST00000395721 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
PTPN20-205ENST00000395721 CHD4Q14839 1912 aa11.74□□□□□ -0.53
PTPN20-205ENST00000395721 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
PTPN20-205ENST00000395721 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
PTPN20-205ENST00000395721 NEFMP07197 916 aa11.73□□□□□ -0.53
PTPN20-205ENST00000395721 GYS1P13807 737 aa11.73□□□□□ -0.53
PTPN20-205ENST00000395721 MYH14Q7Z406 1995 aaKnown RBP11.73□□□□□ -0.53
PTPN20-205ENST00000395721 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN20-205ENST00000395721 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
PTPN20-205ENST00000395721 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
PTPN20-205ENST00000395721 RTF1Q92541 710 aaKnown RBP11.72□□□□□ -0.53
PTPN20-205ENST00000395721 FCHSD2O94868 740 aa11.72□□□□□ -0.53
PTPN20-205ENST00000395721 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
PTPN20-205ENST00000395721 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
PTPN20-205ENST00000395721 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
PTPN20-205ENST00000395721 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
PTPN20-205ENST00000395721 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-205ENST00000395721 ZPR1O75312 459 aa11.71□□□□□ -0.53
PTPN20-205ENST00000395721 CYP19A1P11511 503 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-205ENST00000395721 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
PTPN20-205ENST00000395721 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.54
PTPN20-205ENST00000395721 STARD3NLO95772 234 aa11.7□□□□□ -0.54
PTPN20-205ENST00000395721 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms