RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 DAAM2Q86T65 1068 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 CCDC170Q8IYT3 715 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 TSPY4P0CV99 314 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 TSPY10P0CW01 314 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 SF3A1Q15459 793 aaKnown RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 SMC3Q9UQE7 1217 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 NKTRP30414 1462 aaKnown RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 A0A087WUV0 522 aaPredicted RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 LMOD2Q6P5Q4 547 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 BICD2Q8TD16 824 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 IQCGQ9H095 443 aaKnown RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 KRBA2Q6ZNG9 492 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 CABS1Q96KC9 395 aa7.56□□□□□ -1.2
A1CF-206ENST00000395489 RRAGDQ9NQL2 400 aaPredicted RBP7.56□□□□□ -1.2
A1CF-206ENST00000395489 FYCO1Q9BQS8 1478 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
A1CF-206ENST00000395489 CCDC152Q4G0S7 254 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 DDX19AQ9NUU7 478 aaKnown RBP7.55□□□□□ -1.2
A1CF-206ENST00000395489 CHCHD3Q9NX63 227 aaKnown RBP7.55□□□□□ -1.2
A1CF-206ENST00000395489 VGLL3A8MV65 326 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 GCOM1H8Y6P7 765 aaPredicted RBP7.55□□□□□ -1.2
A1CF-206ENST00000395489 MYZAPP0CAP1 466 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
A1CF-206ENST00000395489 PRPHP41219 470 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 GOLGA1Q92805 767 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 RWDD2BP57060 319 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 TNMDQ9H2S6 317 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 KIF4BQ2VIQ3 1234 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 ANKRD36BQ8N2N9 1353 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 CCDC47Q96A33 483 aaKnown RBP7.55□□□□□ -1.2
A1CF-206ENST00000395489 ERC2O15083 957 aa7.55□□□□□ -1.2
A1CF-206ENST00000395489 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 PPFIA1Q13136 1202 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 CCDC186Q7Z3E2 898 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 SMC5Q8IY18 1101 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 PDCD7Q8N8D1 485 aaKnown RBP7.54□□□□□ -1.2
A1CF-206ENST00000395489 PAIP2BQ9ULR5 123 aaKnown RBP7.54□□□□□ -1.2
A1CF-206ENST00000395489 WDR97A6NE52 1622 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 LACTBP83111 547 aaPredicted RBP7.54□□□□□ -1.2
A1CF-206ENST00000395489 HSP90AA5PQ58FG0 334 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 CECR2Q9BXF3 1484 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 BRD3Q15059 726 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 ANKRD27Q96NW4 1050 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 TACC1O75410 805 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 CPLX2Q6PUV4 134 aaKnown RBP7.54□□□□□ -1.2
A1CF-206ENST00000395489 PAF1Q8N7H5 531 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 ARMC2Q8NEN0 867 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 NUP62CLQ9H1M0 184 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 SYCE3A1L190 88 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 CACNA2D3Q8IZS8 1091 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 GBP1P32455 592 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 UBE2HP62256 183 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 HIP1O00291 1037 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 RNF8O76064 485 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 TBC1D22AQ8WUA7 517 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 MAML3Q96JK9 1138 aa7.54□□□□□ -1.2
A1CF-206ENST00000395489 C16orf45Q96MC5 204 aaPredicted RBP7.54□□□□□ -1.2
A1CF-206ENST00000395489 TOP2AP11388 1531 aaKnown RBP7.54□□□□□ -1.2
A1CF-206ENST00000395489 PHLDB2Q86SQ0 1253 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 TNPO1Q92973 898 aaKnown RBP7.53□□□□□ -1.2
A1CF-206ENST00000395489 DRC1Q96MC2 740 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 DHX16O60231 1041 aaKnown RBP7.53□□□□□ -1.2
A1CF-206ENST00000395489 ATP11AP98196 1134 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 CEP85LQ5SZL2 805 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 ZSCAN31Q96LW9 406 aaPredicted RBP7.53□□□□□ -1.2
A1CF-206ENST00000395489 MACROD2A1Z1Q3 448 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 CREB3O43889 395 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 ZSCAN23Q3MJ62 389 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 MUM1L1Q5H9M0 696 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 ADCY5O95622 1261 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 TERF2Q15554 542 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 PPFIBP2Q8ND30 876 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 JAKMIP1Q96N16 626 aaKnown RBP7.53□□□□□ -1.2
A1CF-206ENST00000395489 TRIM4Q9C037 500 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 PPFIA2O75334 1257 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 PPP2R5AQ15172 486 aa7.53□□□□□ -1.2
A1CF-206ENST00000395489 DZIP1LQ8IYY4 767 aaKnown RBP7.53□□□□□ -1.2
A1CF-206ENST00000395489 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.53□□□□□ -1.2
A1CF-206ENST00000395489 SUPT6HQ7KZ85 1726 aaKnown RBP7.53□□□□□ -1.2
A1CF-206ENST00000395489 EPB41L2O43491 1005 aaKnown RBP7.52□□□□□ -1.2
A1CF-206ENST00000395489 LMNB2Q03252 620 aa7.52□□□□□ -1.2
A1CF-206ENST00000395489 RAB3GAP1Q15042 981 aa7.52□□□□□ -1.2
A1CF-206ENST00000395489 ODF2Q5BJF6 829 aa7.52□□□□□ -1.2
A1CF-206ENST00000395489 TTC19Q6DKK2 380 aaPredicted RBP7.52□□□□□ -1.2
A1CF-206ENST00000395489 PPFIBP1Q86W92 1011 aa7.52□□□□□ -1.2
A1CF-206ENST00000395489 TUBA8Q9NY65 449 aaPredicted RBP7.52□□□□□ -1.2
A1CF-206ENST00000395489 CTTNBP2Q8WZ74 1663 aa7.52□□□□□ -1.21
A1CF-206ENST00000395489 CCDC141Q6ZP82 1450 aa7.52□□□□□ -1.21
A1CF-206ENST00000395489 ATP2B1P20020 1258 aa7.52□□□□□ -1.21
A1CF-206ENST00000395489 FKBP5Q13451 457 aaPredicted RBP7.52□□□□□ -1.21
A1CF-206ENST00000395489 ZBTB12Q9Y330 459 aaPredicted RBP7.52□□□□□ -1.21
A1CF-206ENST00000395489 TBC1D31Q96DN5 1066 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms