RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
VPS26A-203ENST00000395098 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
VPS26A-203ENST00000395098 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
VPS26A-203ENST00000395098 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
VPS26A-203ENST00000395098 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
VPS26A-203ENST00000395098 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 EIF4A1P60842 406 aaKnown RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
VPS26A-203ENST00000395098 PANK1Q8TE04 598 aa16.86■□□□□ 0.29
VPS26A-203ENST00000395098 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
VPS26A-203ENST00000395098 MRC1P22897 1456 aa16.85■□□□□ 0.29
VPS26A-203ENST00000395098 RLBP1P12271 317 aa16.85■□□□□ 0.29
VPS26A-203ENST00000395098 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
VPS26A-203ENST00000395098 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
VPS26A-203ENST00000395098 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
VPS26A-203ENST00000395098 VPS72Q15906 364 aa16.84■□□□□ 0.29
VPS26A-203ENST00000395098 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
VPS26A-203ENST00000395098 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
VPS26A-203ENST00000395098 USP21Q9UK80 565 aa16.84■□□□□ 0.29
VPS26A-203ENST00000395098 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
VPS26A-203ENST00000395098 ZKSCAN2Q63HK3 967 aa16.84■□□□□ 0.29
VPS26A-203ENST00000395098 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
VPS26A-203ENST00000395098 EXOC5O00471 708 aa16.83■□□□□ 0.28
VPS26A-203ENST00000395098 TRIM27P14373 513 aa16.83■□□□□ 0.28
VPS26A-203ENST00000395098 CABP4P57796 275 aa16.83■□□□□ 0.28
VPS26A-203ENST00000395098 PDE3AQ14432 1141 aa16.83■□□□□ 0.28
VPS26A-203ENST00000395098 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
VPS26A-203ENST00000395098 BARGINQ6ZT62 677 aa16.82■□□□□ 0.28
VPS26A-203ENST00000395098 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
VPS26A-203ENST00000395098 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
VPS26A-203ENST00000395098 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
VPS26A-203ENST00000395098 TNS2Q63HR2 1409 aa16.81■□□□□ 0.28
VPS26A-203ENST00000395098 CDCA7Q9BWT1 371 aaPredicted RBP16.81■□□□□ 0.28
VPS26A-203ENST00000395098 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
VPS26A-203ENST00000395098 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
VPS26A-203ENST00000395098 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
VPS26A-203ENST00000395098 ERVV-2B6SEH9 535 aa16.81■□□□□ 0.28
VPS26A-203ENST00000395098 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
VPS26A-203ENST00000395098 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
VPS26A-203ENST00000395098 AFF2P51816 1311 aa16.8■□□□□ 0.28
VPS26A-203ENST00000395098 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
VPS26A-203ENST00000395098 DDB1Q16531 1140 aa16.8■□□□□ 0.28
VPS26A-203ENST00000395098 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
VPS26A-203ENST00000395098 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
VPS26A-203ENST00000395098 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
VPS26A-203ENST00000395098 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
VPS26A-203ENST00000395098 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
VPS26A-203ENST00000395098 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
VPS26A-203ENST00000395098 EIF2S2P20042 333 aaKnown RBP16.78■□□□□ 0.28
VPS26A-203ENST00000395098 HDGFL1Q5TGJ6 251 aa16.78■□□□□ 0.28
VPS26A-203ENST00000395098 G2E3Q7L622 706 aa16.78■□□□□ 0.28
VPS26A-203ENST00000395098 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
VPS26A-203ENST00000395098 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
VPS26A-203ENST00000395098 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-203ENST00000395098 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.28
VPS26A-203ENST00000395098 HOXB7P09629 217 aa16.77■□□□□ 0.27
VPS26A-203ENST00000395098 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.27
VPS26A-203ENST00000395098 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
VPS26A-203ENST00000395098 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
VPS26A-203ENST00000395098 PIGBQ92521 554 aa16.75■□□□□ 0.27
VPS26A-203ENST00000395098 RGS12O14924 1447 aa16.75■□□□□ 0.27
VPS26A-203ENST00000395098 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
VPS26A-203ENST00000395098 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
VPS26A-203ENST00000395098 GJD4Q96KN9 370 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-203ENST00000395098 TMOD3Q9NYL9 352 aa16.74■□□□□ 0.27
VPS26A-203ENST00000395098 GLI3P10071 1580 aa16.74■□□□□ 0.27
VPS26A-203ENST00000395098 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
VPS26A-203ENST00000395098 ATRNO75882 1429 aa16.73■□□□□ 0.27
VPS26A-203ENST00000395098 MS4A1P11836 297 aa16.73■□□□□ 0.27
VPS26A-203ENST00000395098 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
VPS26A-203ENST00000395098 ABCC4O15439 1325 aa16.73■□□□□ 0.27
VPS26A-203ENST00000395098 ANXA1P04083 346 aa16.73■□□□□ 0.27
VPS26A-203ENST00000395098 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
VPS26A-203ENST00000395098 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
VPS26A-203ENST00000395098 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
VPS26A-203ENST00000395098 PHAXQ9H814 394 aaKnown RBP16.72■□□□□ 0.27
VPS26A-203ENST00000395098 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
VPS26A-203ENST00000395098 KCPQ6ZWJ8 1503 aa16.72■□□□□ 0.27
VPS26A-203ENST00000395098 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
VPS26A-203ENST00000395098 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
VPS26A-203ENST00000395098 C5P01031 1676 aa16.72■□□□□ 0.27
VPS26A-203ENST00000395098 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 A0A0G2JS52 829 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 MYT1Q01538 1121 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 FLIIQ13045 1269 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-203ENST00000395098 TRPC5Q9UL62 973 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-203ENST00000395098 BCL9O00512 1426 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 PTPRCP08575 1304 aa16.71■□□□□ 0.27
VPS26A-203ENST00000395098 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.26
VPS26A-203ENST00000395098 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.26
VPS26A-203ENST00000395098 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.26
VPS26A-203ENST00000395098 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
VPS26A-203ENST00000395098 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
VPS26A-203ENST00000395098 ITGB4P16144 1822 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms