RNA–Protein interactions for RNA: ENST00000394672.7

CCDC66-203, Transcript of coiled-coil domain containing 66, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC66, Length 3,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-203ENST00000394672 MYH16Q9H6N6 1097 aa10.17□□□□□ -0.78
CCDC66-203ENST00000394672 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
CCDC66-203ENST00000394672 EXOC5O00471 708 aa10.17□□□□□ -0.78
CCDC66-203ENST00000394672 BRPF1P55201 1214 aaPredicted RBP10.17□□□□□ -0.78
CCDC66-203ENST00000394672 SLC52A2Q9HAB3 445 aa10.17□□□□□ -0.78
CCDC66-203ENST00000394672 DDB1Q16531 1140 aa10.16□□□□□ -0.78
CCDC66-203ENST00000394672 BCORQ6W2J9 1755 aa10.16□□□□□ -0.78
CCDC66-203ENST00000394672 DUSP27Q5VZP5 1158 aa10.16□□□□□ -0.78
CCDC66-203ENST00000394672 NUP188Q5SRE5 1749 aa10.16□□□□□ -0.78
CCDC66-203ENST00000394672 TAF7Q15545 349 aaPredicted RBP10.15□□□□□ -0.78
CCDC66-203ENST00000394672 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.78
CCDC66-203ENST00000394672 RTF1Q92541 710 aaKnown RBP10.15□□□□□ -0.78
CCDC66-203ENST00000394672 COL24A1Q17RW2 1714 aa10.14□□□□□ -0.79
CCDC66-203ENST00000394672 HMGB2P26583 209 aaKnown RBP10.14□□□□□ -0.79
CCDC66-203ENST00000394672 MARCH10Q8NA82 808 aaPredicted RBP10.14□□□□□ -0.79
CCDC66-203ENST00000394672 CHMP4AQ9BY43 222 aa10.14□□□□□ -0.79
CCDC66-203ENST00000394672 RNF123Q5XPI4 1314 aa10.14□□□□□ -0.79
CCDC66-203ENST00000394672 FANCIQ9NVI1 1328 aa10.14□□□□□ -0.79
CCDC66-203ENST00000394672 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
CCDC66-203ENST00000394672 RXRBP28702 533 aa10.13□□□□□ -0.79
CCDC66-203ENST00000394672 PXDNLA1KZ92 1463 aa10.13□□□□□ -0.79
CCDC66-203ENST00000394672 ANKRD36CQ5JPF3 1778 aa10.12□□□□□ -0.79
CCDC66-203ENST00000394672 ERBB4Q15303 1308 aa10.12□□□□□ -0.79
CCDC66-203ENST00000394672 SCN7AQ01118 1682 aa10.12□□□□□ -0.79
CCDC66-203ENST00000394672 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
CCDC66-203ENST00000394672 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
CCDC66-203ENST00000394672 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
CCDC66-203ENST00000394672 LGR6Q9HBX8 967 aa10.11□□□□□ -0.79
CCDC66-203ENST00000394672 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
CCDC66-203ENST00000394672 RGL2O15211 777 aa10.1□□□□□ -0.79
CCDC66-203ENST00000394672 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
CCDC66-203ENST00000394672 C4BP0C0L5 1744 aa10.1□□□□□ -0.79
CCDC66-203ENST00000394672 POTEAQ6S8J7 498 aa10.1□□□□□ -0.79
CCDC66-203ENST00000394672 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
CCDC66-203ENST00000394672 MCM10Q7L590 875 aa10.1□□□□□ -0.79
CCDC66-203ENST00000394672 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-203ENST00000394672 EIF4A1P60842 406 aaKnown RBP10.1□□□□□ -0.79
CCDC66-203ENST00000394672 SMARCC1Q92922 1105 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-203ENST00000394672 UBR3Q6ZT12 1888 aa10.09□□□□□ -0.79
CCDC66-203ENST00000394672 ARFGEF2Q9Y6D5 1785 aa10.09□□□□□ -0.79
CCDC66-203ENST00000394672 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
CCDC66-203ENST00000394672 KRT27Q7Z3Y8 459 aa10.09□□□□□ -0.79
CCDC66-203ENST00000394672 BCL11BQ9C0K0 894 aaPredicted RBP10.09□□□□□ -0.79
CCDC66-203ENST00000394672 TUBGCP6Q96RT7 1819 aa10.09□□□□□ -0.79
CCDC66-203ENST00000394672 TEFQ10587 303 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 CABP4P57796 275 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 ZNF790Q6PG37 636 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 LAMB2P55268 1798 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 BTBD11A6QL63 1104 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 TEX13AQ9BXU3 409 aaPredicted RBP10.08□□□□□ -0.8
CCDC66-203ENST00000394672 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
CCDC66-203ENST00000394672 CCDC9Q9Y3X0 531 aaKnown RBP10.07□□□□□ -0.8
CCDC66-203ENST00000394672 PIGBQ92521 554 aa10.07□□□□□ -0.8
CCDC66-203ENST00000394672 DCTN1Q14203 1278 aa10.06□□□□□ -0.8
CCDC66-203ENST00000394672 ATG3Q9NT62 314 aa10.06□□□□□ -0.8
CCDC66-203ENST00000394672 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
CCDC66-203ENST00000394672 VAMP4O75379 141 aa10.06□□□□□ -0.8
CCDC66-203ENST00000394672 CENPBP07199 599 aaPredicted RBP10.06□□□□□ -0.8
CCDC66-203ENST00000394672 CDCA7LQ96GN5 454 aa10.06□□□□□ -0.8
CCDC66-203ENST00000394672 FMNL2Q96PY5 1086 aa10.06□□□□□ -0.8
CCDC66-203ENST00000394672 ARHGAP45Q92619 1136 aa10.05□□□□□ -0.8
CCDC66-203ENST00000394672 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
CCDC66-203ENST00000394672 PLSCR1O15162 318 aa10.05□□□□□ -0.8
CCDC66-203ENST00000394672 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
CCDC66-203ENST00000394672 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
CCDC66-203ENST00000394672 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
CCDC66-203ENST00000394672 DDX54Q8TDD1 881 aaKnown RBP10.05□□□□□ -0.8
CCDC66-203ENST00000394672 THUMPD2Q9BTF0 503 aaKnown RBP10.05□□□□□ -0.8
CCDC66-203ENST00000394672 ATP10DQ9P241 1426 aa10.05□□□□□ -0.8
CCDC66-203ENST00000394672 PALLDQ8WX93 1383 aa10.04□□□□□ -0.8
CCDC66-203ENST00000394672 CNTNAP4Q9C0A0 1308 aa10.04□□□□□ -0.8
CCDC66-203ENST00000394672 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
CCDC66-203ENST00000394672 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
CCDC66-203ENST00000394672 SNRPA1P09661 255 aaKnown RBP10.03□□□□□ -0.8
CCDC66-203ENST00000394672 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
CCDC66-203ENST00000394672 RC3H1Q5TC82 1133 aaKnown RBP10.03□□□□□ -0.8
CCDC66-203ENST00000394672 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
CCDC66-203ENST00000394672 CASZ1Q86V15 1759 aa10.03□□□□□ -0.8
CCDC66-203ENST00000394672 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
CCDC66-203ENST00000394672 NRXN2Q9P2S2 1712 aa10.03□□□□□ -0.8
CCDC66-203ENST00000394672 PTPRCP08575 1304 aa10.03□□□□□ -0.8
CCDC66-203ENST00000394672 TWISTNBQ3B726 338 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-203ENST00000394672 LRP10Q7Z4F1 713 aa10.03□□□□□ -0.8
CCDC66-203ENST00000394672 KIF16BQ96L93 1317 aa10.02□□□□□ -0.8
CCDC66-203ENST00000394672 TTC5Q8N0Z6 440 aa10.02□□□□□ -0.81
CCDC66-203ENST00000394672 C8orf58Q8NAV2 365 aa10.02□□□□□ -0.81
CCDC66-203ENST00000394672 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
CCDC66-203ENST00000394672 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
CCDC66-203ENST00000394672 TSR2Q969E8 191 aaKnown RBP10.02□□□□□ -0.81
CCDC66-203ENST00000394672 NUP98P52948 1817 aa10.01□□□□□ -0.81
CCDC66-203ENST00000394672 AFDNP55196 1824 aaKnown RBP10.01□□□□□ -0.81
CCDC66-203ENST00000394672 CCDC30Q5VVM6 783 aa10.01□□□□□ -0.81
CCDC66-203ENST00000394672 RCAN3Q9UKA8 241 aa10.01□□□□□ -0.81
CCDC66-203ENST00000394672 ZNF496Q96IT1 587 aaPredicted RBP10.01□□□□□ -0.81
CCDC66-203ENST00000394672 AAMPQ13685 434 aa10□□□□□ -0.81
CCDC66-203ENST00000394672 PDIA6Q15084 440 aa10□□□□□ -0.81
CCDC66-203ENST00000394672 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
CCDC66-203ENST00000394672 COL15A1P39059 1388 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms