RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
PDGFD-202ENST00000393158 GOLGB1Q14789 3259 aaKnown RBP14.05□□□□□ -0.16
PDGFD-202ENST00000393158 IL2RBP14784 551 aa14.05□□□□□ -0.16
PDGFD-202ENST00000393158 PLEKHO1Q53GL0 409 aaPredicted RBP14.05□□□□□ -0.16
PDGFD-202ENST00000393158 CT47B1P0C2W7 299 aaPredicted RBP14.05□□□□□ -0.16
PDGFD-202ENST00000393158 BABAM1Q9NWV8 329 aa14.04□□□□□ -0.16
PDGFD-202ENST00000393158 PRAMEF22A3QJZ6 481 aa14.04□□□□□ -0.16
PDGFD-202ENST00000393158 EIF4A1P60842 406 aaKnown RBP14.04□□□□□ -0.16
PDGFD-202ENST00000393158 FKBP8Q14318 412 aa14.04□□□□□ -0.16
PDGFD-202ENST00000393158 LRP10Q7Z4F1 713 aa14.04□□□□□ -0.16
PDGFD-202ENST00000393158 BARGINQ6ZT62 677 aa14.04□□□□□ -0.16
PDGFD-202ENST00000393158 MRPL50Q8N5N7 158 aaKnown RBP14.04□□□□□ -0.16
PDGFD-202ENST00000393158 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
PDGFD-202ENST00000393158 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
PDGFD-202ENST00000393158 UNC5CLQ8IV45 518 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
PDGFD-202ENST00000393158 CCDC136Q96JN2 1154 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 SLC52A2Q9HAB3 445 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 TAF7Q15545 349 aaPredicted RBP14.03□□□□□ -0.16
PDGFD-202ENST00000393158 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 CASZ1Q86V15 1759 aa14.03□□□□□ -0.16
PDGFD-202ENST00000393158 BCL9O00512 1426 aa14.02□□□□□ -0.16
PDGFD-202ENST00000393158 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.16
PDGFD-202ENST00000393158 VPS72Q15906 364 aa14.02□□□□□ -0.16
PDGFD-202ENST00000393158 RAPGEF4Q8WZA2 1011 aa14.02□□□□□ -0.17
PDGFD-202ENST00000393158 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
PDGFD-202ENST00000393158 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
PDGFD-202ENST00000393158 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
PDGFD-202ENST00000393158 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
PDGFD-202ENST00000393158 THRAP3Q9Y2W1 955 aaKnown RBP14.01□□□□□ -0.17
PDGFD-202ENST00000393158 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
PDGFD-202ENST00000393158 ALDH1L2Q3SY69 923 aa14.01□□□□□ -0.17
PDGFD-202ENST00000393158 DCAF5Q96JK2 942 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 TRIM27P14373 513 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 PDIA6Q15084 440 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
PDGFD-202ENST00000393158 EXOC6Q8TAG9 804 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 USP35Q9P2H5 1018 aa14□□□□□ -0.17
PDGFD-202ENST00000393158 LAS1LQ9Y4W2 734 aaKnown RBP14□□□□□ -0.17
PDGFD-202ENST00000393158 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
PDGFD-202ENST00000393158 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
PDGFD-202ENST00000393158 C8orf37Q96NL8 207 aa13.99□□□□□ -0.17
PDGFD-202ENST00000393158 TNS1Q9HBL0 1735 aaKnown RBP13.99□□□□□ -0.17
PDGFD-202ENST00000393158 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
PDGFD-202ENST00000393158 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
PDGFD-202ENST00000393158 ABCC4O15439 1325 aa13.98□□□□□ -0.17
PDGFD-202ENST00000393158 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
PDGFD-202ENST00000393158 AFDNP55196 1824 aaKnown RBP13.98□□□□□ -0.17
PDGFD-202ENST00000393158 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
PDGFD-202ENST00000393158 ANKRD36CQ5JPF3 1778 aa13.98□□□□□ -0.17
PDGFD-202ENST00000393158 GIGYF1O75420 1035 aaPredicted RBP13.97□□□□□ -0.17
PDGFD-202ENST00000393158 G2E3Q7L622 706 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 RGS17Q9UGC6 210 aaPredicted RBP13.97□□□□□ -0.17
PDGFD-202ENST00000393158 BCORQ6W2J9 1755 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 EVA1CP58658 441 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
PDGFD-202ENST00000393158 NOB1Q9ULX3 412 aaKnown RBP13.97□□□□□ -0.17
PDGFD-202ENST00000393158 NEFMP07197 916 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
PDGFD-202ENST00000393158 PTF1AQ7RTS3 328 aa13.96□□□□□ -0.17
PDGFD-202ENST00000393158 PANK1Q8TE04 598 aa13.96□□□□□ -0.17
PDGFD-202ENST00000393158 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
PDGFD-202ENST00000393158 AFF2P51816 1311 aa13.96□□□□□ -0.18
PDGFD-202ENST00000393158 BTBD11A6QL63 1104 aa13.95□□□□□ -0.18
PDGFD-202ENST00000393158 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
PDGFD-202ENST00000393158 ERVV-2B6SEH9 535 aa13.95□□□□□ -0.18
PDGFD-202ENST00000393158 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
PDGFD-202ENST00000393158 NUP98P52948 1817 aa13.95□□□□□ -0.18
PDGFD-202ENST00000393158 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
PDGFD-202ENST00000393158 PIGBQ92521 554 aa13.95□□□□□ -0.18
PDGFD-202ENST00000393158 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
PDGFD-202ENST00000393158 PROSER3Q2NL68 480 aa13.94□□□□□ -0.18
PDGFD-202ENST00000393158 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
PDGFD-202ENST00000393158 C4AP0C0L4 1744 aa13.94□□□□□ -0.18
PDGFD-202ENST00000393158 C4BP0C0L5 1744 aa13.94□□□□□ -0.18
PDGFD-202ENST00000393158 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
PDGFD-202ENST00000393158 KDM2BQ8NHM5 1336 aa13.94□□□□□ -0.18
PDGFD-202ENST00000393158 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
PDGFD-202ENST00000393158 USP21Q9UK80 565 aa13.93□□□□□ -0.18
PDGFD-202ENST00000393158 SOS1Q07889 1333 aaPredicted RBP13.93□□□□□ -0.18
PDGFD-202ENST00000393158 ADCY9O60503 1353 aa13.93□□□□□ -0.18
PDGFD-202ENST00000393158 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 ARHGAP45Q92619 1136 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 HOXB7P09629 217 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 FAM98CQ17RN3 349 aaKnown RBP13.92□□□□□ -0.18
PDGFD-202ENST00000393158 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
PDGFD-202ENST00000393158 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
PDGFD-202ENST00000393158 DDX54Q8TDD1 881 aaKnown RBP13.91□□□□□ -0.18
PDGFD-202ENST00000393158 RGPD3A6NKT7 1758 aaPredicted RBP13.91□□□□□ -0.18
PDGFD-202ENST00000393158 RGPD4Q7Z3J3 1758 aa13.91□□□□□ -0.18
PDGFD-202ENST00000393158 UBR3Q6ZT12 1888 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms