RNA–Protein interactions for RNA: ENST00000390628.3

IGHV1-58-201, Transcript of immunoglobulin heavy variable 1-58, humanhuman

APPRIS P1 BASIC

Gene IGHV1-58, Length 414 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-58-201ENST00000390628 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
IGHV1-58-201ENST00000390628 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
IGHV1-58-201ENST00000390628 SIK1P57059 783 aa12.74□□□□□ -0.37
IGHV1-58-201ENST00000390628 SYT17Q9BSW7 474 aa12.74□□□□□ -0.37
IGHV1-58-201ENST00000390628 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
IGHV1-58-201ENST00000390628 DIAPH1O60610 1272 aaKnown RBP12.73□□□□□ -0.37
IGHV1-58-201ENST00000390628 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
IGHV1-58-201ENST00000390628 CABP4P57796 275 aa12.73□□□□□ -0.37
IGHV1-58-201ENST00000390628 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
IGHV1-58-201ENST00000390628 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
IGHV1-58-201ENST00000390628 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
IGHV1-58-201ENST00000390628 MAP3K5Q99683 1374 aa12.72□□□□□ -0.37
IGHV1-58-201ENST00000390628 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
IGHV1-58-201ENST00000390628 PHF14O94880 888 aa12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 HMOX1P09601 288 aa12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 YY1P25490 414 aa12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
IGHV1-58-201ENST00000390628 SCN11AQ9UI33 1791 aa12.7□□□□□ -0.38
IGHV1-58-201ENST00000390628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
IGHV1-58-201ENST00000390628 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
IGHV1-58-201ENST00000390628 GNPATO15228 680 aa12.69□□□□□ -0.38
IGHV1-58-201ENST00000390628 SSFA2P28290 1259 aa12.69□□□□□ -0.38
IGHV1-58-201ENST00000390628 ITPK1Q13572 414 aa12.69□□□□□ -0.38
IGHV1-58-201ENST00000390628 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
IGHV1-58-201ENST00000390628 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
IGHV1-58-201ENST00000390628 VIRMAQ69YN4 1812 aaKnown RBP12.68□□□□□ -0.38
IGHV1-58-201ENST00000390628 RALBP1Q15311 655 aa12.68□□□□□ -0.38
IGHV1-58-201ENST00000390628 CCDC184Q52MB2 194 aa12.68□□□□□ -0.38
IGHV1-58-201ENST00000390628 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
IGHV1-58-201ENST00000390628 COL3A1P02461 1466 aaPredicted RBP12.67□□□□□ -0.38
IGHV1-58-201ENST00000390628 GPR162Q16538 588 aa12.67□□□□□ -0.38
IGHV1-58-201ENST00000390628 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
IGHV1-58-201ENST00000390628 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
IGHV1-58-201ENST00000390628 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
IGHV1-58-201ENST00000390628 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
IGHV1-58-201ENST00000390628 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
IGHV1-58-201ENST00000390628 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
IGHV1-58-201ENST00000390628 SMIM5Q71RC9 77 aa12.65□□□□□ -0.38
IGHV1-58-201ENST00000390628 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
IGHV1-58-201ENST00000390628 MYBBP1AQ9BQG0 1328 aaKnown RBP12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 RNMTO43148 476 aaKnown RBP12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 UTRNP46939 3433 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 MRC1P22897 1456 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 CHD4Q14839 1912 aa12.64□□□□□ -0.39
IGHV1-58-201ENST00000390628 TJP1Q07157 1748 aa12.63□□□□□ -0.39
IGHV1-58-201ENST00000390628 RC3H1Q5TC82 1133 aaKnown RBP12.63□□□□□ -0.39
IGHV1-58-201ENST00000390628 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
IGHV1-58-201ENST00000390628 LGR6Q9HBX8 967 aa12.63□□□□□ -0.39
IGHV1-58-201ENST00000390628 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
IGHV1-58-201ENST00000390628 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
IGHV1-58-201ENST00000390628 ADRA2BP18089 450 aa12.62□□□□□ -0.39
IGHV1-58-201ENST00000390628 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
IGHV1-58-201ENST00000390628 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
IGHV1-58-201ENST00000390628 RPS6KA4O75676 772 aa12.61□□□□□ -0.39
IGHV1-58-201ENST00000390628 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
IGHV1-58-201ENST00000390628 RFC4P35249 363 aa12.61□□□□□ -0.39
IGHV1-58-201ENST00000390628 C4AP0C0L4 1744 aa12.61□□□□□ -0.39
IGHV1-58-201ENST00000390628 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
IGHV1-58-201ENST00000390628 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
IGHV1-58-201ENST00000390628 TEFQ10587 303 aa12.6□□□□□ -0.39
IGHV1-58-201ENST00000390628 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
IGHV1-58-201ENST00000390628 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
IGHV1-58-201ENST00000390628 MMP10P09238 476 aa12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 SLC39A6Q13433 755 aa12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 NLGN1Q8N2Q7 840 aa12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
IGHV1-58-201ENST00000390628 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
IGHV1-58-201ENST00000390628 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
IGHV1-58-201ENST00000390628 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
IGHV1-58-201ENST00000390628 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
IGHV1-58-201ENST00000390628 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
IGHV1-58-201ENST00000390628 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
IGHV1-58-201ENST00000390628 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
IGHV1-58-201ENST00000390628 SIPA1L3O60292 1781 aaPredicted RBP12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 NEFMP07197 916 aa12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 GYS1P13807 737 aa12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 GOLGB1Q14789 3259 aaKnown RBP12.56□□□□□ -0.4
IGHV1-58-201ENST00000390628 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
IGHV1-58-201ENST00000390628 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
IGHV1-58-201ENST00000390628 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
IGHV1-58-201ENST00000390628 SRP68Q9UHB9 627 aaKnown RBP12.55□□□□□ -0.4
IGHV1-58-201ENST00000390628 USP42Q9H9J4 1324 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms