RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 CABP4P57796 275 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 ITPK1Q13572 414 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
TRAV20-201ENST00000390448 MMP10P09238 476 aa12.31□□□□□ -0.44
TRAV20-201ENST00000390448 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
TRAV20-201ENST00000390448 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
TRAV20-201ENST00000390448 ZNF530Q6P9A1 599 aaPredicted RBP12.31□□□□□ -0.44
TRAV20-201ENST00000390448 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
TRAV20-201ENST00000390448 CEP350Q5VT06 3117 aa12.31□□□□□ -0.44
TRAV20-201ENST00000390448 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
TRAV20-201ENST00000390448 ITGB4P16144 1822 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 RFC4P35249 363 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 MTHFSP49914 203 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
TRAV20-201ENST00000390448 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
TRAV20-201ENST00000390448 TAF1LQ8IZX4 1826 aa12.29□□□□□ -0.44
TRAV20-201ENST00000390448 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
TRAV20-201ENST00000390448 ADRA2BP18089 450 aa12.27□□□□□ -0.45
TRAV20-201ENST00000390448 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
TRAV20-201ENST00000390448 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
TRAV20-201ENST00000390448 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
TRAV20-201ENST00000390448 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
TRAV20-201ENST00000390448 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
TRAV20-201ENST00000390448 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
TRAV20-201ENST00000390448 PLEKHG2Q9H7P9 1386 aa12.27□□□□□ -0.45
TRAV20-201ENST00000390448 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
TRAV20-201ENST00000390448 RPS6KA4O75676 772 aa12.26□□□□□ -0.45
TRAV20-201ENST00000390448 TGFB2P61812 414 aa12.26□□□□□ -0.45
TRAV20-201ENST00000390448 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
TRAV20-201ENST00000390448 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
TRAV20-201ENST00000390448 UBR3Q6ZT12 1888 aa12.25□□□□□ -0.45
TRAV20-201ENST00000390448 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
TRAV20-201ENST00000390448 AEBP1Q8IUX7 1158 aa12.25□□□□□ -0.45
TRAV20-201ENST00000390448 FCHSD2O94868 740 aa12.24□□□□□ -0.45
TRAV20-201ENST00000390448 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
TRAV20-201ENST00000390448 CNTNAP4Q9C0A0 1308 aa12.24□□□□□ -0.45
TRAV20-201ENST00000390448 GYS1P13807 737 aa12.23□□□□□ -0.45
TRAV20-201ENST00000390448 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
TRAV20-201ENST00000390448 KDRP35968 1356 aa12.22□□□□□ -0.45
TRAV20-201ENST00000390448 DPEP1P16444 411 aa12.22□□□□□ -0.45
TRAV20-201ENST00000390448 ZPR1O75312 459 aa12.21□□□□□ -0.45
TRAV20-201ENST00000390448 HSPA6P17066 643 aa12.21□□□□□ -0.45
TRAV20-201ENST00000390448 IL13P35225 146 aa12.21□□□□□ -0.45
TRAV20-201ENST00000390448 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
TRAV20-201ENST00000390448 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
TRAV20-201ENST00000390448 ADCY9O60503 1353 aa12.2□□□□□ -0.46
TRAV20-201ENST00000390448 CICQ96RK0 1608 aaPredicted RBP12.2□□□□□ -0.46
TRAV20-201ENST00000390448 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
TRAV20-201ENST00000390448 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
TRAV20-201ENST00000390448 PXDNLA1KZ92 1463 aa12.2□□□□□ -0.46
TRAV20-201ENST00000390448 HMOX1P09601 288 aa12.19□□□□□ -0.46
TRAV20-201ENST00000390448 CNGB1Q14028 1251 aaPredicted RBP12.19□□□□□ -0.46
TRAV20-201ENST00000390448 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
TRAV20-201ENST00000390448 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
TRAV20-201ENST00000390448 FKBP8Q14318 412 aa12.18□□□□□ -0.46
TRAV20-201ENST00000390448 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
TRAV20-201ENST00000390448 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
TRAV20-201ENST00000390448 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
TRAV20-201ENST00000390448 C10orf71Q711Q0 1435 aa12.18□□□□□ -0.46
TRAV20-201ENST00000390448 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
TRAV20-201ENST00000390448 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
TRAV20-201ENST00000390448 INTS5Q6P9B9 1019 aaKnown RBP12.17□□□□□ -0.46
TRAV20-201ENST00000390448 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
TRAV20-201ENST00000390448 KIF3CO14782 793 aa12.16□□□□□ -0.46
TRAV20-201ENST00000390448 RNMTO43148 476 aaKnown RBP12.16□□□□□ -0.46
TRAV20-201ENST00000390448 TOMM70O94826 608 aa12.16□□□□□ -0.46
TRAV20-201ENST00000390448 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
TRAV20-201ENST00000390448 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
TRAV20-201ENST00000390448 C9orf131Q5VYM1 1079 aa12.16□□□□□ -0.46
TRAV20-201ENST00000390448 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
TRAV20-201ENST00000390448 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
TRAV20-201ENST00000390448 CHRNA5P30532 468 aa12.15□□□□□ -0.46
TRAV20-201ENST00000390448 DDR1Q08345 913 aa12.15□□□□□ -0.46
TRAV20-201ENST00000390448 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
TRAV20-201ENST00000390448 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.46
TRAV20-201ENST00000390448 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
TRAV20-201ENST00000390448 KIF7Q2M1P5 1343 aa12.14□□□□□ -0.47
TRAV20-201ENST00000390448 STARD3NLO95772 234 aa12.14□□□□□ -0.47
TRAV20-201ENST00000390448 KCNA3P22001 575 aa12.14□□□□□ -0.47
TRAV20-201ENST00000390448 APLP1P51693 650 aa12.14□□□□□ -0.47
TRAV20-201ENST00000390448 MTHFSDQ2M296 383 aaKnown RBP12.14□□□□□ -0.47
TRAV20-201ENST00000390448 NPM2Q86SE8 214 aaKnown RBP12.14□□□□□ -0.47
TRAV20-201ENST00000390448 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
TRAV20-201ENST00000390448 N4BP2Q86UW6 1770 aaPredicted RBP12.14□□□□□ -0.47
TRAV20-201ENST00000390448 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
TRAV20-201ENST00000390448 POLRMTO00411 1230 aaKnown RBP12.13□□□□□ -0.47
TRAV20-201ENST00000390448 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
TRAV20-201ENST00000390448 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
TRAV20-201ENST00000390448 TM4SF1P30408 202 aa12.13□□□□□ -0.47
TRAV20-201ENST00000390448 TEFQ10587 303 aa12.13□□□□□ -0.47
TRAV20-201ENST00000390448 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
TRAV20-201ENST00000390448 NMRK2Q9NPI5 230 aa12.13□□□□□ -0.47
TRAV20-201ENST00000390448 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms