RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
TRAV18-201ENST00000390446 SMC1BQ8NDV3 1235 aa13.65□□□□□ -0.22
TRAV18-201ENST00000390446 PIM2Q9P1W9 311 aa13.65□□□□□ -0.22
TRAV18-201ENST00000390446 PXDNLA1KZ92 1463 aa13.64□□□□□ -0.23
TRAV18-201ENST00000390446 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
TRAV18-201ENST00000390446 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
TRAV18-201ENST00000390446 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
TRAV18-201ENST00000390446 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
TRAV18-201ENST00000390446 DALRD3Q5D0E6 543 aaKnown RBP13.63□□□□□ -0.23
TRAV18-201ENST00000390446 ASAP1Q9ULH1 1129 aa13.63□□□□□ -0.23
TRAV18-201ENST00000390446 HSPA1AP0DMV8 641 aaKnown RBP13.62□□□□□ -0.23
TRAV18-201ENST00000390446 HSPA1BP0DMV9 641 aaKnown RBP13.62□□□□□ -0.23
TRAV18-201ENST00000390446 ITPK1Q13572 414 aa13.62□□□□□ -0.23
TRAV18-201ENST00000390446 KCPQ6ZWJ8 1503 aa13.61□□□□□ -0.23
TRAV18-201ENST00000390446 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
TRAV18-201ENST00000390446 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
TRAV18-201ENST00000390446 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
TRAV18-201ENST00000390446 INSRP06213 1382 aa13.6□□□□□ -0.23
TRAV18-201ENST00000390446 FYB1O15117 783 aa13.6□□□□□ -0.23
TRAV18-201ENST00000390446 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
TRAV18-201ENST00000390446 UBR3Q6ZT12 1888 aa13.6□□□□□ -0.23
TRAV18-201ENST00000390446 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
TRAV18-201ENST00000390446 FLT4P35916 1363 aa13.59□□□□□ -0.23
TRAV18-201ENST00000390446 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
TRAV18-201ENST00000390446 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
TRAV18-201ENST00000390446 ADRA2BP18089 450 aa13.58□□□□□ -0.24
TRAV18-201ENST00000390446 ATG3Q9NT62 314 aa13.58□□□□□ -0.24
TRAV18-201ENST00000390446 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
TRAV18-201ENST00000390446 GYS1P13807 737 aa13.57□□□□□ -0.24
TRAV18-201ENST00000390446 VEGFAP15692 232 aaPredicted RBP13.57□□□□□ -0.24
TRAV18-201ENST00000390446 ITGB4P16144 1822 aa13.57□□□□□ -0.24
TRAV18-201ENST00000390446 C10orf71Q711Q0 1435 aa13.56□□□□□ -0.24
TRAV18-201ENST00000390446 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
TRAV18-201ENST00000390446 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
TRAV18-201ENST00000390446 DCAF5Q96JK2 942 aa13.56□□□□□ -0.24
TRAV18-201ENST00000390446 KCNA3P22001 575 aa13.55□□□□□ -0.24
TRAV18-201ENST00000390446 CHRNA5P30532 468 aa13.55□□□□□ -0.24
TRAV18-201ENST00000390446 RC3H1Q5TC82 1133 aaKnown RBP13.55□□□□□ -0.24
TRAV18-201ENST00000390446 EMILIN1Q9Y6C2 1016 aa13.55□□□□□ -0.24
TRAV18-201ENST00000390446 PHKG2P15735 406 aa13.54□□□□□ -0.24
TRAV18-201ENST00000390446 CABP4P57796 275 aa13.53□□□□□ -0.24
TRAV18-201ENST00000390446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAV18-201ENST00000390446 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
TRAV18-201ENST00000390446 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
TRAV18-201ENST00000390446 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.25
TRAV18-201ENST00000390446 RASSF7Q02833 373 aa13.52□□□□□ -0.25
TRAV18-201ENST00000390446 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
TRAV18-201ENST00000390446 EYA1Q99502 592 aa13.52□□□□□ -0.25
TRAV18-201ENST00000390446 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
TRAV18-201ENST00000390446 C4AP0C0L4 1744 aa13.52□□□□□ -0.25
TRAV18-201ENST00000390446 KIF13BQ9NQT8 1826 aa13.52□□□□□ -0.25
TRAV18-201ENST00000390446 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
TRAV18-201ENST00000390446 GLTPD2A6NH11 291 aa13.51□□□□□ -0.25
TRAV18-201ENST00000390446 ZPR1O75312 459 aa13.51□□□□□ -0.25
TRAV18-201ENST00000390446 HSP90AB1P08238 724 aaKnown RBP13.51□□□□□ -0.25
TRAV18-201ENST00000390446 LMNB1P20700 586 aa13.51□□□□□ -0.25
TRAV18-201ENST00000390446 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
TRAV18-201ENST00000390446 FKBP8Q14318 412 aa13.5□□□□□ -0.25
TRAV18-201ENST00000390446 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
TRAV18-201ENST00000390446 TESK2Q96S53 571 aa13.5□□□□□ -0.25
TRAV18-201ENST00000390446 MKRN1Q9UHC7 482 aaKnown RBP13.5□□□□□ -0.25
TRAV18-201ENST00000390446 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
TRAV18-201ENST00000390446 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
TRAV18-201ENST00000390446 MAP2P11137 1827 aaKnown RBP13.49□□□□□ -0.25
TRAV18-201ENST00000390446 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
TRAV18-201ENST00000390446 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
TRAV18-201ENST00000390446 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
TRAV18-201ENST00000390446 KIAA1551Q9HCM1 1747 aa13.49□□□□□ -0.25
TRAV18-201ENST00000390446 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
TRAV18-201ENST00000390446 DDR1Q08345 913 aa13.48□□□□□ -0.25
TRAV18-201ENST00000390446 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
TRAV18-201ENST00000390446 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
TRAV18-201ENST00000390446 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
TRAV18-201ENST00000390446 ARFGEF1Q9Y6D6 1849 aa13.46□□□□□ -0.25
TRAV18-201ENST00000390446 USP42Q9H9J4 1324 aaKnown RBP13.46□□□□□ -0.25
TRAV18-201ENST00000390446 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
TRAV18-201ENST00000390446 MTHFSP49914 203 aa13.46□□□□□ -0.25
TRAV18-201ENST00000390446 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
TRAV18-201ENST00000390446 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
TRAV18-201ENST00000390446 KDRP35968 1356 aa13.45□□□□□ -0.26
TRAV18-201ENST00000390446 H0YIN7 160 aa13.45□□□□□ -0.26
TRAV18-201ENST00000390446 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
TRAV18-201ENST00000390446 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
TRAV18-201ENST00000390446 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
TRAV18-201ENST00000390446 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
TRAV18-201ENST00000390446 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
TRAV18-201ENST00000390446 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
TRAV18-201ENST00000390446 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
TRAV18-201ENST00000390446 FOXN1O15353 648 aa13.43□□□□□ -0.26
TRAV18-201ENST00000390446 TM4SF1P30408 202 aa13.43□□□□□ -0.26
TRAV18-201ENST00000390446 BRCA1P38398 1863 aaKnown RBP13.43□□□□□ -0.26
TRAV18-201ENST00000390446 CTCFP49711 727 aaPredicted RBP13.43□□□□□ -0.26
TRAV18-201ENST00000390446 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
TRAV18-201ENST00000390446 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRAV18-201ENST00000390446 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
TRAV18-201ENST00000390446 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
TRAV18-201ENST00000390446 AMOTQ4VCS5 1084 aa13.42□□□□□ -0.26
TRAV18-201ENST00000390446 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
TRAV18-201ENST00000390446 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
TRAV18-201ENST00000390446 NPHP1O15259 732 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms