RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 CARD11Q9BXL7 1154 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
TRAV17-201ENST00000390445 DISP2A7MBM2 1401 aa11.88□□□□□ -0.51
TRAV17-201ENST00000390445 EZH2Q15910 746 aaKnown RBP11.88□□□□□ -0.51
TRAV17-201ENST00000390445 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
TRAV17-201ENST00000390445 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
TRAV17-201ENST00000390445 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
TRAV17-201ENST00000390445 RGPD3A6NKT7 1758 aaPredicted RBP11.87□□□□□ -0.51
TRAV17-201ENST00000390445 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
TRAV17-201ENST00000390445 SNPHO15079 494 aa11.87□□□□□ -0.51
TRAV17-201ENST00000390445 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
TRAV17-201ENST00000390445 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
TRAV17-201ENST00000390445 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
TRAV17-201ENST00000390445 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
TRAV17-201ENST00000390445 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
TRAV17-201ENST00000390445 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
TRAV17-201ENST00000390445 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
TRAV17-201ENST00000390445 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
TRAV17-201ENST00000390445 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
TRAV17-201ENST00000390445 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
TRAV17-201ENST00000390445 NUDT7P0C024 238 aa11.85□□□□□ -0.51
TRAV17-201ENST00000390445 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
TRAV17-201ENST00000390445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAV17-201ENST00000390445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAV17-201ENST00000390445 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
TRAV17-201ENST00000390445 NME9Q86XW9 330 aa11.84□□□□□ -0.51
TRAV17-201ENST00000390445 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
TRAV17-201ENST00000390445 CAMKK2Q96RR4 588 aa11.84□□□□□ -0.51
TRAV17-201ENST00000390445 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
TRAV17-201ENST00000390445 A0A1W2PP64 1363 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 ABCC6O95255 1503 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 APBA3O96018 575 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 PTGER2P43116 358 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 TRIM26Q12899 539 aaPredicted RBP11.83□□□□□ -0.52
TRAV17-201ENST00000390445 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
TRAV17-201ENST00000390445 DDX12PQ92771 950 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
TRAV17-201ENST00000390445 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.52
TRAV17-201ENST00000390445 MYOM1P52179 1685 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 BTAF1O14981 1849 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 GRXCR2A6NFK2 248 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 OVOS2A0A0G2JMS6 1433 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 OVOS2A0A0J9YW53 1432 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 OVOS2Q6IE36 1432 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
TRAV17-201ENST00000390445 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
TRAV17-201ENST00000390445 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
TRAV17-201ENST00000390445 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
TRAV17-201ENST00000390445 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
TRAV17-201ENST00000390445 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
TRAV17-201ENST00000390445 CSB-PGBD3P0DP91 1061 aa11.8□□□□□ -0.52
TRAV17-201ENST00000390445 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
TRAV17-201ENST00000390445 DDB1Q16531 1140 aa11.8□□□□□ -0.52
TRAV17-201ENST00000390445 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
TRAV17-201ENST00000390445 TESK2Q96S53 571 aa11.8□□□□□ -0.52
TRAV17-201ENST00000390445 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
TRAV17-201ENST00000390445 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
TRAV17-201ENST00000390445 HDGFL2Q7Z4V5 671 aaPredicted RBP11.79□□□□□ -0.52
TRAV17-201ENST00000390445 PARD3Q8TEW0 1356 aa11.79□□□□□ -0.52
TRAV17-201ENST00000390445 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
TRAV17-201ENST00000390445 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
TRAV17-201ENST00000390445 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
TRAV17-201ENST00000390445 FAM163AQ96GL9 167 aaPredicted RBP11.78□□□□□ -0.52
TRAV17-201ENST00000390445 DOT1LQ8TEK3 1739 aa11.77□□□□□ -0.52
TRAV17-201ENST00000390445 OSBPP22059 807 aa11.77□□□□□ -0.53
TRAV17-201ENST00000390445 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
TRAV17-201ENST00000390445 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
TRAV17-201ENST00000390445 TNS2Q63HR2 1409 aa11.77□□□□□ -0.53
TRAV17-201ENST00000390445 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
TRAV17-201ENST00000390445 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
TRAV17-201ENST00000390445 ST18O60284 1047 aa11.76□□□□□ -0.53
TRAV17-201ENST00000390445 TERF2IPQ9NYB0 399 aa11.76□□□□□ -0.53
TRAV17-201ENST00000390445 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
TRAV17-201ENST00000390445 ERBB3P21860 1342 aa11.76□□□□□ -0.53
TRAV17-201ENST00000390445 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
TRAV17-201ENST00000390445 FBLN1P23142 703 aa11.75□□□□□ -0.53
TRAV17-201ENST00000390445 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
TRAV17-201ENST00000390445 USP47Q96K76 1375 aa11.75□□□□□ -0.53
TRAV17-201ENST00000390445 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
TRAV17-201ENST00000390445 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
TRAV17-201ENST00000390445 ANKRD24Q8TF21 1146 aa11.74□□□□□ -0.53
TRAV17-201ENST00000390445 PUS7Q96PZ0 661 aaKnown RBP11.74□□□□□ -0.53
TRAV17-201ENST00000390445 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
TRAV17-201ENST00000390445 NLRP2Q9NX02 1062 aa11.74□□□□□ -0.53
TRAV17-201ENST00000390445 EXOC5O00471 708 aa11.73□□□□□ -0.53
TRAV17-201ENST00000390445 BCL9O00512 1426 aa11.73□□□□□ -0.53
TRAV17-201ENST00000390445 PHF14O94880 888 aa11.73□□□□□ -0.53
TRAV17-201ENST00000390445 FOSBP53539 338 aa11.73□□□□□ -0.53
TRAV17-201ENST00000390445 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
TRAV17-201ENST00000390445 NINLQ9Y2I6 1382 aa11.73□□□□□ -0.53
TRAV17-201ENST00000390445 ITGB4P16144 1822 aa11.72□□□□□ -0.53
TRAV17-201ENST00000390445 LY75O60449 1722 aa11.72□□□□□ -0.53
TRAV17-201ENST00000390445 ANKRD26Q9UPS8 1709 aa11.72□□□□□ -0.53
TRAV17-201ENST00000390445 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
TRAV17-201ENST00000390445 KCNQ2O43526 872 aa11.72□□□□□ -0.53
TRAV17-201ENST00000390445 ACSBG1Q96GR2 724 aa11.72□□□□□ -0.53
TRAV17-201ENST00000390445 PAPPAQ13219 1627 aa11.71□□□□□ -0.53
TRAV17-201ENST00000390445 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms