RNA–Protein interactions for RNA: ENST00000390443.3

TRAV8-6-201, Transcript of T cell receptor alpha variable 8-6, humanhuman

APPRIS P1 BASIC

Gene TRAV8-6, Length 561 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6-201ENST00000390443 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
TRAV8-6-201ENST00000390443 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
TRAV8-6-201ENST00000390443 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
TRAV8-6-201ENST00000390443 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
TRAV8-6-201ENST00000390443 KIF3CO14782 793 aa12.73□□□□□ -0.37
TRAV8-6-201ENST00000390443 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
TRAV8-6-201ENST00000390443 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
TRAV8-6-201ENST00000390443 TGFB2P61812 414 aa12.72□□□□□ -0.37
TRAV8-6-201ENST00000390443 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
TRAV8-6-201ENST00000390443 RFC4P35249 363 aa12.71□□□□□ -0.37
TRAV8-6-201ENST00000390443 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
TRAV8-6-201ENST00000390443 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
TRAV8-6-201ENST00000390443 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
TRAV8-6-201ENST00000390443 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
TRAV8-6-201ENST00000390443 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.38
TRAV8-6-201ENST00000390443 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 KIF20BQ96Q89 1820 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 FCHSD2O94868 740 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 DPEP1P16444 411 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 CABP4P57796 275 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 PARP3Q9Y6F1 533 aa12.7□□□□□ -0.38
TRAV8-6-201ENST00000390443 KDRP35968 1356 aa12.69□□□□□ -0.38
TRAV8-6-201ENST00000390443 GYS1P13807 737 aa12.69□□□□□ -0.38
TRAV8-6-201ENST00000390443 APLP1P51693 650 aa12.69□□□□□ -0.38
TRAV8-6-201ENST00000390443 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
TRAV8-6-201ENST00000390443 RC3H1Q5TC82 1133 aaKnown RBP12.69□□□□□ -0.38
TRAV8-6-201ENST00000390443 CNTNAP4Q9C0A0 1308 aa12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 PTCD1O75127 700 aaKnown RBP12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 TOMM70O94826 608 aa12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
TRAV8-6-201ENST00000390443 ITGB4P16144 1822 aa12.67□□□□□ -0.38
TRAV8-6-201ENST00000390443 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
TRAV8-6-201ENST00000390443 MTHFSP49914 203 aa12.67□□□□□ -0.38
TRAV8-6-201ENST00000390443 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
TRAV8-6-201ENST00000390443 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
TRAV8-6-201ENST00000390443 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
TRAV8-6-201ENST00000390443 C1orf141Q5JVX7 400 aa12.66□□□□□ -0.38
TRAV8-6-201ENST00000390443 C9orf131Q5VYM1 1079 aa12.66□□□□□ -0.38
TRAV8-6-201ENST00000390443 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
TRAV8-6-201ENST00000390443 AEBP1Q8IUX7 1158 aa12.65□□□□□ -0.38
TRAV8-6-201ENST00000390443 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
TRAV8-6-201ENST00000390443 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
TRAV8-6-201ENST00000390443 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 KCNA3P22001 575 aa12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 FKBP8Q14318 412 aa12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 PANK3Q9H999 370 aa12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 PIM2Q9P1W9 311 aa12.64□□□□□ -0.39
TRAV8-6-201ENST00000390443 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
TRAV8-6-201ENST00000390443 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
TRAV8-6-201ENST00000390443 DNAJC5GQ8N7S2 189 aa12.63□□□□□ -0.39
TRAV8-6-201ENST00000390443 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
TRAV8-6-201ENST00000390443 CHRNA5P30532 468 aa12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 DDR1Q08345 913 aa12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 SULT6B1Q6IMI4 303 aa12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
TRAV8-6-201ENST00000390443 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
TRAV8-6-201ENST00000390443 ZPR1O75312 459 aa12.6□□□□□ -0.39
TRAV8-6-201ENST00000390443 HTRA3P83110 453 aa12.6□□□□□ -0.39
TRAV8-6-201ENST00000390443 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 EIF4G2P78344 907 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 USPL1Q5W0Q7 1092 aa12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 DNAJC10Q8IXB1 793 aa12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
TRAV8-6-201ENST00000390443 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.39
TRAV8-6-201ENST00000390443 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
TRAV8-6-201ENST00000390443 FSTL1Q12841 308 aa12.58□□□□□ -0.4
TRAV8-6-201ENST00000390443 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
TRAV8-6-201ENST00000390443 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 TM4SF1P30408 202 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 IL13P35225 146 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 AKAP4Q5JQC9 854 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
TRAV8-6-201ENST00000390443 KIF13BQ9NQT8 1826 aa12.56□□□□□ -0.4
TRAV8-6-201ENST00000390443 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
TRAV8-6-201ENST00000390443 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
TRAV8-6-201ENST00000390443 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
TRAV8-6-201ENST00000390443 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
TRAV8-6-201ENST00000390443 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
TRAV8-6-201ENST00000390443 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
TRAV8-6-201ENST00000390443 RASSF7Q02833 373 aa12.55□□□□□ -0.4
TRAV8-6-201ENST00000390443 NFIXQ14938 502 aa12.55□□□□□ -0.4
TRAV8-6-201ENST00000390443 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
TRAV8-6-201ENST00000390443 HMOX1P09601 288 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms