RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 CSB-PGBD3P0DP91 1061 aa19.03■□□□□ 0.64
HCG27-201ENST00000383331 AKAP4Q5JQC9 854 aa19.03■□□□□ 0.64
HCG27-201ENST00000383331 SEPT12Q8IYM1 358 aa19.03■□□□□ 0.64
HCG27-201ENST00000383331 ARHGAP45Q92619 1136 aa19.03■□□□□ 0.64
HCG27-201ENST00000383331 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.64
HCG27-201ENST00000383331 WDR17Q8IZU2 1322 aa19.02■□□□□ 0.64
HCG27-201ENST00000383331 IGHDP01880 384 aa19.02■□□□□ 0.63
HCG27-201ENST00000383331 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.63
HCG27-201ENST00000383331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.02■□□□□ 0.63
HCG27-201ENST00000383331 OVOS2A0A0G2JMS6 1433 aa19.01■□□□□ 0.63
HCG27-201ENST00000383331 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
HCG27-201ENST00000383331 ELL2O00472 640 aaPredicted RBP19■□□□□ 0.63
HCG27-201ENST00000383331 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
HCG27-201ENST00000383331 COL14A1Q05707 1796 aaKnown RBP19■□□□□ 0.63
HCG27-201ENST00000383331 NRAPQ86VF7 1730 aa19■□□□□ 0.63
HCG27-201ENST00000383331 TATP17735 454 aaPredicted RBP19■□□□□ 0.63
HCG27-201ENST00000383331 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
HCG27-201ENST00000383331 A0A0G2JS52 829 aa18.99■□□□□ 0.63
HCG27-201ENST00000383331 MYT1Q01538 1121 aa18.99■□□□□ 0.63
HCG27-201ENST00000383331 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
HCG27-201ENST00000383331 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
HCG27-201ENST00000383331 BRWD3Q6RI45 1802 aa18.99■□□□□ 0.63
HCG27-201ENST00000383331 VIRMAQ69YN4 1812 aaKnown RBP18.98■□□□□ 0.63
HCG27-201ENST00000383331 ONECUT3O60422 494 aaPredicted RBP18.98■□□□□ 0.63
HCG27-201ENST00000383331 CCDC125Q86Z20 511 aa18.98■□□□□ 0.63
HCG27-201ENST00000383331 TMEM57Q8N5G2 664 aa18.98■□□□□ 0.63
HCG27-201ENST00000383331 IL17REQ8NFR9 667 aa18.98■□□□□ 0.63
HCG27-201ENST00000383331 PKD1L3Q7Z443 1732 aa18.98■□□□□ 0.63
HCG27-201ENST00000383331 FAM98CQ17RN3 349 aaKnown RBP18.97■□□□□ 0.63
HCG27-201ENST00000383331 SKAP1Q86WV1 359 aa18.97■□□□□ 0.63
HCG27-201ENST00000383331 PARP4Q9UKK3 1724 aaKnown RBP18.97■□□□□ 0.63
HCG27-201ENST00000383331 ADAMTS7Q9UKP4 1686 aa18.97■□□□□ 0.63
HCG27-201ENST00000383331 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
HCG27-201ENST00000383331 SPG7Q9UQ90 795 aa18.97■□□□□ 0.63
HCG27-201ENST00000383331 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
HCG27-201ENST00000383331 CARD10Q9BWT7 1032 aa18.96■□□□□ 0.63
HCG27-201ENST00000383331 SOS1Q07889 1333 aaPredicted RBP18.95■□□□□ 0.62
HCG27-201ENST00000383331 MEGF6O75095 1541 aa18.95■□□□□ 0.62
HCG27-201ENST00000383331 KRT24Q2M2I5 525 aa18.95■□□□□ 0.62
HCG27-201ENST00000383331 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
HCG27-201ENST00000383331 TSPYL4Q9UJ04 414 aa18.95■□□□□ 0.62
HCG27-201ENST00000383331 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
HCG27-201ENST00000383331 ABCC4O15439 1325 aa18.94■□□□□ 0.62
HCG27-201ENST00000383331 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
HCG27-201ENST00000383331 SPATA31A5Q5VU36 1347 aa18.93■□□□□ 0.62
HCG27-201ENST00000383331 SPATA31A7Q8IWB4 1347 aa18.93■□□□□ 0.62
HCG27-201ENST00000383331 EVA1CP58658 441 aa18.93■□□□□ 0.62
HCG27-201ENST00000383331 RWDD1Q9H446 243 aaPredicted RBP18.93■□□□□ 0.62
HCG27-201ENST00000383331 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
HCG27-201ENST00000383331 API5Q9BZZ5 524 aaKnown RBP18.92■□□□□ 0.62
HCG27-201ENST00000383331 SCN11AQ9UI33 1791 aa18.92■□□□□ 0.62
HCG27-201ENST00000383331 RNMTO43148 476 aaKnown RBP18.91■□□□□ 0.62
HCG27-201ENST00000383331 PDE4AP27815 886 aa18.91■□□□□ 0.62
HCG27-201ENST00000383331 BACH2Q9BYV9 841 aa18.91■□□□□ 0.62
HCG27-201ENST00000383331 STRN4Q9NRL3 753 aa18.91■□□□□ 0.62
HCG27-201ENST00000383331 KDM3BQ7LBC6 1761 aa18.91■□□□□ 0.62
HCG27-201ENST00000383331 IFNL2Q8IZJ0 200 aa18.91■□□□□ 0.62
HCG27-201ENST00000383331 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
HCG27-201ENST00000383331 TEFQ10587 303 aa18.9■□□□□ 0.62
HCG27-201ENST00000383331 SF3B2Q13435 895 aaKnown RBP18.9■□□□□ 0.62
HCG27-201ENST00000383331 HDAC1Q13547 482 aaPredicted RBP18.9■□□□□ 0.62
HCG27-201ENST00000383331 HSP90AB1P08238 724 aaKnown RBP18.89■□□□□ 0.61
HCG27-201ENST00000383331 PHKG2P15735 406 aa18.89■□□□□ 0.61
HCG27-201ENST00000383331 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.61
HCG27-201ENST00000383331 LGR6Q9HBX8 967 aa18.89■□□□□ 0.61
HCG27-201ENST00000383331 CACNA1FO60840 1977 aa18.89■□□□□ 0.61
HCG27-201ENST00000383331 ZBTB7BO15156 539 aaPredicted RBP18.88■□□□□ 0.61
HCG27-201ENST00000383331 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
HCG27-201ENST00000383331 IL2RBP14784 551 aa18.88■□□□□ 0.61
HCG27-201ENST00000383331 LARP1Q6PKG0 1096 aaKnown RBP18.88■□□□□ 0.61
HCG27-201ENST00000383331 MPRIPQ6WCQ1 1025 aa18.88■□□□□ 0.61
HCG27-201ENST00000383331 SPATA31A1Q5TZJ5 1347 aa18.88■□□□□ 0.61
HCG27-201ENST00000383331 FAM182BQ5T319 152 aa18.87■□□□□ 0.61
HCG27-201ENST00000383331 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
HCG27-201ENST00000383331 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
HCG27-201ENST00000383331 PTPRCP08575 1304 aa18.87■□□□□ 0.61
HCG27-201ENST00000383331 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
HCG27-201ENST00000383331 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
HCG27-201ENST00000383331 DCAF5Q96JK2 942 aa18.86■□□□□ 0.61
HCG27-201ENST00000383331 MRC1P22897 1456 aa18.85■□□□□ 0.61
HCG27-201ENST00000383331 HOXB7P09629 217 aa18.85■□□□□ 0.61
HCG27-201ENST00000383331 RGS3P49796 1198 aa18.85■□□□□ 0.61
HCG27-201ENST00000383331 INTS3Q68E01 1043 aaKnown RBP18.85■□□□□ 0.61
HCG27-201ENST00000383331 ZCRB1Q8TBF4 217 aaKnown RBP18.85■□□□□ 0.61
HCG27-201ENST00000383331 THSD7AQ9UPZ6 1657 aa18.85■□□□□ 0.61
HCG27-201ENST00000383331 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
HCG27-201ENST00000383331 CYP27B1O15528 508 aa18.84■□□□□ 0.61
HCG27-201ENST00000383331 BTBD11A6QL63 1104 aa18.83■□□□□ 0.61
HCG27-201ENST00000383331 PDZRN3Q9UPQ7 1066 aa18.83■□□□□ 0.61
HCG27-201ENST00000383331 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.6
HCG27-201ENST00000383331 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
HCG27-201ENST00000383331 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
HCG27-201ENST00000383331 SMC5Q8IY18 1101 aa18.82■□□□□ 0.6
HCG27-201ENST00000383331 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
HCG27-201ENST00000383331 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
HCG27-201ENST00000383331 NKX1-1Q15270 411 aaPredicted RBP18.81■□□□□ 0.6
HCG27-201ENST00000383331 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
HCG27-201ENST00000383331 CCDC30Q5VVM6 783 aa18.81■□□□□ 0.6
HCG27-201ENST00000383331 DISP2A7MBM2 1401 aa18.81■□□□□ 0.6
HCG27-201ENST00000383331 BAG6P46379 1132 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms