RNA–Protein interactions for RNA: ENST00000382518.5

CD9-203, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CD9, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-203ENST00000382518 PCDH11XQ9BZA7 1347 aa21.46■■□□□ 1.03
CD9-203ENST00000382518 PCDH11YQ9BZA8 1340 aa21.46■■□□□ 1.03
CD9-203ENST00000382518 EIF4A1P60842 406 aaKnown RBP21.46■■□□□ 1.03
CD9-203ENST00000382518 NUTM2BA6NNL0 878 aaPredicted RBP21.45■■□□□ 1.02
CD9-203ENST00000382518 NUTM2EB1AL46 878 aaPredicted RBP21.45■■□□□ 1.02
CD9-203ENST00000382518 NUTM2AQ8IVF1 878 aaPredicted RBP21.45■■□□□ 1.02
CD9-203ENST00000382518 JCADQ9P266 1359 aa21.45■■□□□ 1.02
CD9-203ENST00000382518 API5Q9BZZ5 524 aaKnown RBP21.44■■□□□ 1.02
CD9-203ENST00000382518 SLC52A2Q9HAB3 445 aa21.44■■□□□ 1.02
CD9-203ENST00000382518 HOXB7P09629 217 aa21.44■■□□□ 1.02
CD9-203ENST00000382518 KDM3BQ7LBC6 1761 aa21.43■■□□□ 1.02
CD9-203ENST00000382518 CCDC30Q5VVM6 783 aa21.43■■□□□ 1.02
CD9-203ENST00000382518 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
CD9-203ENST00000382518 KCNQ3O43525 872 aa21.42■■□□□ 1.02
CD9-203ENST00000382518 TMEM57Q8N5G2 664 aa21.42■■□□□ 1.02
CD9-203ENST00000382518 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
CD9-203ENST00000382518 MRC1P22897 1456 aa21.41■■□□□ 1.02
CD9-203ENST00000382518 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
CD9-203ENST00000382518 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
CD9-203ENST00000382518 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
CD9-203ENST00000382518 CHMP4AQ9BY43 222 aa21.41■■□□□ 1.02
CD9-203ENST00000382518 PTPRCP08575 1304 aa21.41■■□□□ 1.02
CD9-203ENST00000382518 SCN11AQ9UI33 1791 aa21.4■■□□□ 1.02
CD9-203ENST00000382518 NKX1-1Q15270 411 aaPredicted RBP21.4■■□□□ 1.02
CD9-203ENST00000382518 SIPA1L3O60292 1781 aaPredicted RBP21.4■■□□□ 1.02
CD9-203ENST00000382518 ABCC4O15439 1325 aa21.4■■□□□ 1.02
CD9-203ENST00000382518 DISP2A7MBM2 1401 aa21.4■■□□□ 1.02
CD9-203ENST00000382518 NFATC2IPQ8NCF5 419 aa21.4■■□□□ 1.02
CD9-203ENST00000382518 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.01
CD9-203ENST00000382518 VIRMAQ69YN4 1812 aaKnown RBP21.38■■□□□ 1.01
CD9-203ENST00000382518 CABP4P57796 275 aa21.38■■□□□ 1.01
CD9-203ENST00000382518 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
CD9-203ENST00000382518 HEG1Q9ULI3 1381 aa21.38■■□□□ 1.01
CD9-203ENST00000382518 DDX54Q8TDD1 881 aaKnown RBP21.37■■□□□ 1.01
CD9-203ENST00000382518 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
CD9-203ENST00000382518 SLIT2O94813 1529 aa21.37■■□□□ 1.01
CD9-203ENST00000382518 ERVV-2B6SEH9 535 aa21.36■■□□□ 1.01
CD9-203ENST00000382518 ZNF790Q6PG37 636 aa21.36■■□□□ 1.01
CD9-203ENST00000382518 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
CD9-203ENST00000382518 NRAPQ86VF7 1730 aa21.36■■□□□ 1.01
CD9-203ENST00000382518 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
CD9-203ENST00000382518 THRAP3Q9Y2W1 955 aaKnown RBP21.36■■□□□ 1.01
CD9-203ENST00000382518 SPATA31A6Q5VVP1 1343 aa21.35■■□□□ 1.01
CD9-203ENST00000382518 GIGYF1O75420 1035 aaPredicted RBP21.35■■□□□ 1.01
CD9-203ENST00000382518 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
CD9-203ENST00000382518 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
CD9-203ENST00000382518 RGS12O14924 1447 aa21.35■■□□□ 1.01
CD9-203ENST00000382518 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
CD9-203ENST00000382518 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
CD9-203ENST00000382518 G2E3Q7L622 706 aa21.34■■□□□ 1.01
CD9-203ENST00000382518 EIF2S2P20042 333 aaKnown RBP21.33■■□□□ 1.01
CD9-203ENST00000382518 SHANK3Q9BYB0 1731 aa21.33■■□□□ 1.01
CD9-203ENST00000382518 NWD2Q9ULI1 1742 aa21.33■■□□□ 1.01
CD9-203ENST00000382518 INTS3Q68E01 1043 aaKnown RBP21.32■■□□□ 1
CD9-203ENST00000382518 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
CD9-203ENST00000382518 PCDHB15Q9Y5E8 787 aa21.32■■□□□ 1
CD9-203ENST00000382518 FLIIQ13045 1269 aa21.31■■□□□ 1
CD9-203ENST00000382518 TTC5Q8N0Z6 440 aa21.31■■□□□ 1
CD9-203ENST00000382518 SPATA31A5Q5VU36 1347 aa21.31■■□□□ 1
CD9-203ENST00000382518 SPATA31A7Q8IWB4 1347 aa21.31■■□□□ 1
CD9-203ENST00000382518 EXOC5O00471 708 aa21.31■■□□□ 1
CD9-203ENST00000382518 ZBTB7BO15156 539 aaPredicted RBP21.31■■□□□ 1
CD9-203ENST00000382518 UNC5CLQ8IV45 518 aa21.3■■□□□ 1
CD9-203ENST00000382518 NGLY1Q96IV0 654 aa21.3■■□□□ 1
CD9-203ENST00000382518 IGHDP01880 384 aa21.29■■□□□ 1
CD9-203ENST00000382518 HSPA1LP34931 641 aa21.29■■□□□ 1
CD9-203ENST00000382518 C8orf37Q96NL8 207 aa21.29■■□□□ 1
CD9-203ENST00000382518 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
CD9-203ENST00000382518 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
CD9-203ENST00000382518 FMNL2Q96PY5 1086 aa21.28■■□□□ 1
CD9-203ENST00000382518 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
CD9-203ENST00000382518 TNS2Q63HR2 1409 aa21.28■■□□□ 1
CD9-203ENST00000382518 BARGINQ6ZT62 677 aa21.27■■□□□ 1
CD9-203ENST00000382518 FNBP4Q8N3X1 1017 aaPredicted RBP21.27■■□□□ 1
CD9-203ENST00000382518 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
CD9-203ENST00000382518 PRAMEF22A3QJZ6 481 aa21.27■□□□□ 0.99
CD9-203ENST00000382518 RWDD1Q9H446 243 aaPredicted RBP21.27■□□□□ 0.99
CD9-203ENST00000382518 CCDC9Q9Y3X0 531 aaKnown RBP21.27■□□□□ 0.99
CD9-203ENST00000382518 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
CD9-203ENST00000382518 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
CD9-203ENST00000382518 WNK3Q9BYP7 1800 aa21.25■□□□□ 0.99
CD9-203ENST00000382518 LRP6O75581 1613 aa21.25■□□□□ 0.99
CD9-203ENST00000382518 BCL9LQ86UU0 1499 aa21.25■□□□□ 0.99
CD9-203ENST00000382518 VPS72Q15906 364 aa21.25■□□□□ 0.99
CD9-203ENST00000382518 PHAXQ9H814 394 aaKnown RBP21.25■□□□□ 0.99
CD9-203ENST00000382518 F6X3S4 739 aa21.24■□□□□ 0.99
CD9-203ENST00000382518 TMOD3Q9NYL9 352 aa21.24■□□□□ 0.99
CD9-203ENST00000382518 DDB1Q16531 1140 aa21.23■□□□□ 0.99
CD9-203ENST00000382518 CACNA1FO60840 1977 aa21.23■□□□□ 0.99
CD9-203ENST00000382518 HDAC1Q13547 482 aaPredicted RBP21.23■□□□□ 0.99
CD9-203ENST00000382518 SLC4A10Q6U841 1118 aa21.23■□□□□ 0.99
CD9-203ENST00000382518 DDX21Q9NR30 783 aaKnown RBP eCLIP21.23■□□□□ 0.99
CD9-203ENST00000382518 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
CD9-203ENST00000382518 TOGARAM1Q9Y4F4 1720 aa21.22■□□□□ 0.99
CD9-203ENST00000382518 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
CD9-203ENST00000382518 ANXA1P04083 346 aa21.2■□□□□ 0.98
CD9-203ENST00000382518 USP21Q9UK80 565 aa21.2■□□□□ 0.98
CD9-203ENST00000382518 PAPPAQ13219 1627 aa21.2■□□□□ 0.98
CD9-203ENST00000382518 PDIA6Q15084 440 aa21.19■□□□□ 0.98
CD9-203ENST00000382518 PROSER3Q2NL68 480 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms