RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ATP6V1AP38606 617 aa19.32■□□□□ 0.68
SHOX-202ENST00000381575 PLEKHO1Q53GL0 409 aaPredicted RBP19.32■□□□□ 0.68
SHOX-202ENST00000381575 SULT6B1Q6IMI4 303 aa19.32■□□□□ 0.68
SHOX-202ENST00000381575 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
SHOX-202ENST00000381575 SCN11AQ9UI33 1791 aa19.3■□□□□ 0.68
SHOX-202ENST00000381575 GNPATO15228 680 aa19.3■□□□□ 0.68
SHOX-202ENST00000381575 IL13P35225 146 aa19.3■□□□□ 0.68
SHOX-202ENST00000381575 CC2D1BQ5T0F9 858 aaKnown RBP19.3■□□□□ 0.68
SHOX-202ENST00000381575 FLAD1Q8NFF5 587 aa19.3■□□□□ 0.68
SHOX-202ENST00000381575 KDRP35968 1356 aa19.29■□□□□ 0.68
SHOX-202ENST00000381575 MYH14Q7Z406 1995 aaKnown RBP19.29■□□□□ 0.68
SHOX-202ENST00000381575 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
SHOX-202ENST00000381575 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
SHOX-202ENST00000381575 SLC4A9Q96Q91 983 aa19.29■□□□□ 0.68
SHOX-202ENST00000381575 RBM42Q9BTD8 480 aaKnown RBP19.29■□□□□ 0.68
SHOX-202ENST00000381575 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
SHOX-202ENST00000381575 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
SHOX-202ENST00000381575 YBX3P16989 372 aaKnown RBP eCLIP19.27■□□□□ 0.68
SHOX-202ENST00000381575 MTHFSP49914 203 aa19.27■□□□□ 0.68
SHOX-202ENST00000381575 HSP90AB1P08238 724 aaKnown RBP19.26■□□□□ 0.67
SHOX-202ENST00000381575 SSFA2P28290 1259 aa19.26■□□□□ 0.67
SHOX-202ENST00000381575 CABP4P57796 275 aa19.26■□□□□ 0.67
SHOX-202ENST00000381575 AMOTQ4VCS5 1084 aa19.26■□□□□ 0.67
SHOX-202ENST00000381575 C1orf141Q5JVX7 400 aa19.26■□□□□ 0.67
SHOX-202ENST00000381575 ZNF831Q5JPB2 1677 aa19.26■□□□□ 0.67
SHOX-202ENST00000381575 PER1O15534 1290 aaPredicted RBP19.25■□□□□ 0.67
SHOX-202ENST00000381575 HMOX1P09601 288 aa19.25■□□□□ 0.67
SHOX-202ENST00000381575 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
SHOX-202ENST00000381575 C4AP0C0L4 1744 aa19.25■□□□□ 0.67
SHOX-202ENST00000381575 HMGB2P26583 209 aaKnown RBP19.24■□□□□ 0.67
SHOX-202ENST00000381575 PTCD1O75127 700 aaKnown RBP19.23■□□□□ 0.67
SHOX-202ENST00000381575 TJP1Q07157 1748 aa19.23■□□□□ 0.67
SHOX-202ENST00000381575 NFATC2IPQ8NCF5 419 aa19.22■□□□□ 0.67
SHOX-202ENST00000381575 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
SHOX-202ENST00000381575 N4BP2Q86UW6 1770 aaPredicted RBP19.2■□□□□ 0.66
SHOX-202ENST00000381575 RTCBQ9Y3I0 505 aaKnown RBP19.19■□□□□ 0.66
SHOX-202ENST00000381575 CICQ96RK0 1608 aaPredicted RBP19.19■□□□□ 0.66
SHOX-202ENST00000381575 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
SHOX-202ENST00000381575 COL3A1P02461 1466 aaPredicted RBP19.18■□□□□ 0.66
SHOX-202ENST00000381575 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
SHOX-202ENST00000381575 MMP10P09238 476 aa19.18■□□□□ 0.66
SHOX-202ENST00000381575 TRAPPC3LQ5T215 181 aa19.18■□□□□ 0.66
SHOX-202ENST00000381575 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
SHOX-202ENST00000381575 KIF13BQ9NQT8 1826 aa19.17■□□□□ 0.66
SHOX-202ENST00000381575 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
SHOX-202ENST00000381575 ARHGEF1Q92888 912 aaKnown RBP19.17■□□□□ 0.66
SHOX-202ENST00000381575 CNTNAP4Q9C0A0 1308 aa19.17■□□□□ 0.66
SHOX-202ENST00000381575 MRC1P22897 1456 aa19.15■□□□□ 0.66
SHOX-202ENST00000381575 GRIN3BO60391 1043 aa19.15■□□□□ 0.66
SHOX-202ENST00000381575 CRKLP46109 303 aaKnown RBP19.15■□□□□ 0.66
SHOX-202ENST00000381575 SLC39A6Q13433 755 aa19.15■□□□□ 0.66
SHOX-202ENST00000381575 MTHFSDQ2M296 383 aaKnown RBP19.15■□□□□ 0.66
SHOX-202ENST00000381575 RC3H1Q5TC82 1133 aaKnown RBP19.15■□□□□ 0.66
SHOX-202ENST00000381575 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
SHOX-202ENST00000381575 RNMTO43148 476 aaKnown RBP19.14■□□□□ 0.65
SHOX-202ENST00000381575 RPS6KA4O75676 772 aa19.14■□□□□ 0.65
SHOX-202ENST00000381575 SLC52A2Q9HAB3 445 aa19.14■□□□□ 0.65
SHOX-202ENST00000381575 NPC1L1Q9UHC9 1359 aa19.13■□□□□ 0.65
SHOX-202ENST00000381575 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
SHOX-202ENST00000381575 GYS1P13807 737 aa19.13■□□□□ 0.65
SHOX-202ENST00000381575 RFC4P35249 363 aa19.13■□□□□ 0.65
SHOX-202ENST00000381575 SRP68Q9UHB9 627 aaKnown RBP19.13■□□□□ 0.65
SHOX-202ENST00000381575 KCPQ6ZWJ8 1503 aa19.12■□□□□ 0.65
SHOX-202ENST00000381575 ADRA2BP18089 450 aa19.11■□□□□ 0.65
SHOX-202ENST00000381575 DNAJC10Q8IXB1 793 aa19.11■□□□□ 0.65
SHOX-202ENST00000381575 PXDNLA1KZ92 1463 aa19.11■□□□□ 0.65
SHOX-202ENST00000381575 UBR2Q8IWV8 1755 aa19.1■□□□□ 0.65
SHOX-202ENST00000381575 BRCA1P38398 1863 aaKnown RBP19.09■□□□□ 0.65
SHOX-202ENST00000381575 NLGN1Q8N2Q7 840 aa19.09■□□□□ 0.65
SHOX-202ENST00000381575 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
SHOX-202ENST00000381575 SIPA1L3O60292 1781 aaPredicted RBP19.09■□□□□ 0.65
SHOX-202ENST00000381575 INTS5Q6P9B9 1019 aaKnown RBP19.08■□□□□ 0.65
SHOX-202ENST00000381575 FKBP8Q14318 412 aa19.07■□□□□ 0.64
SHOX-202ENST00000381575 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
SHOX-202ENST00000381575 A0A0G2JLW4 131 aa19.06■□□□□ 0.64
SHOX-202ENST00000381575 CCDC87Q9NVE4 849 aa19.06■□□□□ 0.64
SHOX-202ENST00000381575 PARP3Q9Y6F1 533 aa19.06■□□□□ 0.64
SHOX-202ENST00000381575 USP42Q9H9J4 1324 aaKnown RBP19.06■□□□□ 0.64
SHOX-202ENST00000381575 AFDNP55196 1824 aaKnown RBP19.05■□□□□ 0.64
SHOX-202ENST00000381575 CEP350Q5VT06 3117 aa19.05■□□□□ 0.64
SHOX-202ENST00000381575 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
SHOX-202ENST00000381575 CYP19A1P11511 503 aaPredicted RBP19.05■□□□□ 0.64
SHOX-202ENST00000381575 C1QTNF8P60827 252 aa19.05■□□□□ 0.64
SHOX-202ENST00000381575 DDR1Q08345 913 aa19.05■□□□□ 0.64
SHOX-202ENST00000381575 ZNF526Q8TF50 670 aaPredicted RBP19.05■□□□□ 0.64
SHOX-202ENST00000381575 DPEP1P16444 411 aa19.04■□□□□ 0.64
SHOX-202ENST00000381575 ZBTB1Q9Y2K1 713 aa19.04■□□□□ 0.64
SHOX-202ENST00000381575 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
SHOX-202ENST00000381575 ADCY9O60503 1353 aa19.03■□□□□ 0.64
SHOX-202ENST00000381575 IL17REQ8NFR9 667 aa19.03■□□□□ 0.64
SHOX-202ENST00000381575 BCS1LQ9Y276 419 aa19.03■□□□□ 0.64
SHOX-202ENST00000381575 SENP3-EIF4A1A0A087X0R7 540 aa19.02■□□□□ 0.64
SHOX-202ENST00000381575 PRKAR2BP31323 418 aa19.02■□□□□ 0.64
SHOX-202ENST00000381575 USPL1Q5W0Q7 1092 aa19.02■□□□□ 0.64
SHOX-202ENST00000381575 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.64
SHOX-202ENST00000381575 ARFGEF1Q9Y6D6 1849 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 COL15A1P39059 1388 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 TGFB2P61812 414 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms