RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 BTBD11A6QL63 1104 aa22.38■■□□□ 1.17
LYSMD4-203ENST00000378904 CYP27B1O15528 508 aa22.38■■□□□ 1.17
LYSMD4-203ENST00000378904 PLCH1Q4KWH8 1693 aa22.38■■□□□ 1.17
LYSMD4-203ENST00000378904 IL2RBP14784 551 aa22.37■■□□□ 1.17
LYSMD4-203ENST00000378904 SOS1Q07889 1333 aaPredicted RBP22.37■■□□□ 1.17
LYSMD4-203ENST00000378904 AAMPQ13685 434 aa22.36■■□□□ 1.17
LYSMD4-203ENST00000378904 TMEM57Q8N5G2 664 aa22.36■■□□□ 1.17
LYSMD4-203ENST00000378904 SHANK3Q9BYB0 1731 aa22.36■■□□□ 1.17
LYSMD4-203ENST00000378904 EIF4A1P60842 406 aaKnown RBP22.35■■□□□ 1.17
LYSMD4-203ENST00000378904 ZCRB1Q8TBF4 217 aaKnown RBP22.35■■□□□ 1.17
LYSMD4-203ENST00000378904 CACNA1FO60840 1977 aa22.35■■□□□ 1.17
LYSMD4-203ENST00000378904 KCNQ3O43525 872 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 ADAMTS2O95450 1211 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 ITPRIPQ8IWB1 547 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 CERKQ8TCT0 537 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 USP35Q9P2H5 1018 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 HSP90AB1P08238 724 aaKnown RBP22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 PCDH11XQ9BZA7 1347 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 PCDH11YQ9BZA8 1340 aa22.34■■□□□ 1.17
LYSMD4-203ENST00000378904 API5Q9BZZ5 524 aaKnown RBP22.33■■□□□ 1.17
LYSMD4-203ENST00000378904 DDX19BQ9UMR2 479 aa22.33■■□□□ 1.17
LYSMD4-203ENST00000378904 NUTM2BA6NNL0 878 aaPredicted RBP22.33■■□□□ 1.16
LYSMD4-203ENST00000378904 NUTM2EB1AL46 878 aaPredicted RBP22.33■■□□□ 1.16
LYSMD4-203ENST00000378904 SLC4A2P04920 1241 aa22.33■■□□□ 1.16
LYSMD4-203ENST00000378904 NUTM2AQ8IVF1 878 aaPredicted RBP22.33■■□□□ 1.16
LYSMD4-203ENST00000378904 SLC52A2Q9HAB3 445 aa22.33■■□□□ 1.16
LYSMD4-203ENST00000378904 NRAPQ86VF7 1730 aa22.32■■□□□ 1.16
LYSMD4-203ENST00000378904 MRC1P22897 1456 aa22.32■■□□□ 1.16
LYSMD4-203ENST00000378904 ABCC4O15439 1325 aa22.31■■□□□ 1.16
LYSMD4-203ENST00000378904 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
LYSMD4-203ENST00000378904 CCDC30Q5VVM6 783 aa22.31■■□□□ 1.16
LYSMD4-203ENST00000378904 STK31Q9BXU1 1019 aa22.3■■□□□ 1.16
LYSMD4-203ENST00000378904 PTPRCP08575 1304 aa22.3■■□□□ 1.16
LYSMD4-203ENST00000378904 HOXB7P09629 217 aa22.29■■□□□ 1.16
LYSMD4-203ENST00000378904 CENPQQ7L2Z9 268 aaPredicted RBP22.29■■□□□ 1.16
LYSMD4-203ENST00000378904 NFATC2IPQ8NCF5 419 aa22.29■■□□□ 1.16
LYSMD4-203ENST00000378904 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
LYSMD4-203ENST00000378904 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
LYSMD4-203ENST00000378904 RGS12O14924 1447 aa22.28■■□□□ 1.16
LYSMD4-203ENST00000378904 HDGFL1Q5TGJ6 251 aa22.28■■□□□ 1.16
LYSMD4-203ENST00000378904 NWD2Q9ULI1 1742 aa22.28■■□□□ 1.16
LYSMD4-203ENST00000378904 JCADQ9P266 1359 aa22.27■■□□□ 1.16
LYSMD4-203ENST00000378904 G2E3Q7L622 706 aa22.27■■□□□ 1.15
LYSMD4-203ENST00000378904 PCDHB15Q9Y5E8 787 aa22.27■■□□□ 1.15
LYSMD4-203ENST00000378904 HEG1Q9ULI3 1381 aa22.27■■□□□ 1.15
LYSMD4-203ENST00000378904 DISP2A7MBM2 1401 aa22.26■■□□□ 1.15
LYSMD4-203ENST00000378904 DDX54Q8TDD1 881 aaKnown RBP22.26■■□□□ 1.15
LYSMD4-203ENST00000378904 NKX1-1Q15270 411 aaPredicted RBP22.25■■□□□ 1.15
LYSMD4-203ENST00000378904 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
LYSMD4-203ENST00000378904 CABP4P57796 275 aa22.25■■□□□ 1.15
LYSMD4-203ENST00000378904 SLC39A6Q13433 755 aa22.25■■□□□ 1.15
LYSMD4-203ENST00000378904 IGHDP01880 384 aa22.24■■□□□ 1.15
LYSMD4-203ENST00000378904 EIF2S2P20042 333 aaKnown RBP22.24■■□□□ 1.15
LYSMD4-203ENST00000378904 ZBTB40Q9NUA8 1239 aa22.24■■□□□ 1.15
LYSMD4-203ENST00000378904 GIGYF1O75420 1035 aaPredicted RBP22.24■■□□□ 1.15
LYSMD4-203ENST00000378904 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
LYSMD4-203ENST00000378904 SLIT2O94813 1529 aa22.23■■□□□ 1.15
LYSMD4-203ENST00000378904 ZBTB7BO15156 539 aaPredicted RBP22.22■■□□□ 1.15
LYSMD4-203ENST00000378904 FLIIQ13045 1269 aa22.22■■□□□ 1.15
LYSMD4-203ENST00000378904 INTS3Q68E01 1043 aaKnown RBP22.22■■□□□ 1.15
LYSMD4-203ENST00000378904 C5P01031 1676 aa22.21■■□□□ 1.15
LYSMD4-203ENST00000378904 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-203ENST00000378904 TOGARAM1Q9Y4F4 1720 aa22.21■■□□□ 1.15
LYSMD4-203ENST00000378904 ERVV-2B6SEH9 535 aa22.21■■□□□ 1.15
LYSMD4-203ENST00000378904 SPATA31A1Q5TZJ5 1347 aa22.2■■□□□ 1.14
LYSMD4-203ENST00000378904 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
LYSMD4-203ENST00000378904 TTC5Q8N0Z6 440 aa22.19■■□□□ 1.14
LYSMD4-203ENST00000378904 CHPF2Q9P2E5 772 aa22.19■■□□□ 1.14
LYSMD4-203ENST00000378904 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
LYSMD4-203ENST00000378904 F6X3S4 739 aa22.18■■□□□ 1.14
LYSMD4-203ENST00000378904 ZNF496Q96IT1 587 aaPredicted RBP22.18■■□□□ 1.14
LYSMD4-203ENST00000378904 RWDD1Q9H446 243 aaPredicted RBP22.18■■□□□ 1.14
LYSMD4-203ENST00000378904 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
LYSMD4-203ENST00000378904 THRAP3Q9Y2W1 955 aaKnown RBP22.18■■□□□ 1.14
LYSMD4-203ENST00000378904 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
LYSMD4-203ENST00000378904 N4BP2Q86UW6 1770 aaPredicted RBP22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 SPATA31A5Q5VU36 1347 aa22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 SPATA31A6Q5VVP1 1343 aa22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 SPATA31A7Q8IWB4 1347 aa22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 EXOC5O00471 708 aa22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 DBF4Q9UBU7 674 aaPredicted RBP22.16■■□□□ 1.14
LYSMD4-203ENST00000378904 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 C8orf37Q96NL8 207 aa22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 FMNL2Q96PY5 1086 aa22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 CDCA7Q9BWT1 371 aaPredicted RBP22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 TNS2Q63HR2 1409 aa22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 SKAP1Q86WV1 359 aa22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 ITGB4P16144 1822 aa22.15■■□□□ 1.14
LYSMD4-203ENST00000378904 GLI3P10071 1580 aa22.14■■□□□ 1.14
LYSMD4-203ENST00000378904 LRP6O75581 1613 aa22.14■■□□□ 1.13
LYSMD4-203ENST00000378904 NGLY1Q96IV0 654 aa22.14■■□□□ 1.13
LYSMD4-203ENST00000378904 ANXA1P04083 346 aa22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 CCT4P50991 539 aaKnown RBP22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 HDAC1Q13547 482 aaPredicted RBP22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 UNC5CLQ8IV45 518 aa22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 CCDC9Q9Y3X0 531 aaKnown RBP22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 SNRPA1P09661 255 aaKnown RBP22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 HSPA1LP34931 641 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms