RNA–Protein interactions for RNA: ENST00000378680.6

DMD-208, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-208ENST00000378680 CCDC30Q5VVM6 783 aa24.06■■□□□ 1.44
DMD-208ENST00000378680 ITPRIPQ8IWB1 547 aa24.06■■□□□ 1.44
DMD-208ENST00000378680 DCAF5Q96JK2 942 aa24.06■■□□□ 1.44
DMD-208ENST00000378680 SIPA1L3O60292 1781 aaPredicted RBP24.06■■□□□ 1.44
DMD-208ENST00000378680 PCDH11XQ9BZA7 1347 aa24.05■■□□□ 1.44
DMD-208ENST00000378680 PCDH11YQ9BZA8 1340 aa24.05■■□□□ 1.44
DMD-208ENST00000378680 CYP27B1O15528 508 aa24.05■■□□□ 1.44
DMD-208ENST00000378680 TMEM57Q8N5G2 664 aa24.05■■□□□ 1.44
DMD-208ENST00000378680 STK31Q9BXU1 1019 aa24.05■■□□□ 1.44
DMD-208ENST00000378680 CHMP4AQ9BY43 222 aa24.05■■□□□ 1.44
DMD-208ENST00000378680 EIF4A1P60842 406 aaKnown RBP24.04■■□□□ 1.44
DMD-208ENST00000378680 KDM6AO15550 1401 aaPredicted RBP24.04■■□□□ 1.44
DMD-208ENST00000378680 SLC4A2P04920 1241 aa24.03■■□□□ 1.44
DMD-208ENST00000378680 CERKQ8TCT0 537 aa24.03■■□□□ 1.44
DMD-208ENST00000378680 PTPRCP08575 1304 aa24.03■■□□□ 1.44
DMD-208ENST00000378680 ADAMTS2O95450 1211 aa24.02■■□□□ 1.44
DMD-208ENST00000378680 HOXB7P09629 217 aa24.02■■□□□ 1.44
DMD-208ENST00000378680 CENPQQ7L2Z9 268 aaPredicted RBP24.02■■□□□ 1.44
DMD-208ENST00000378680 SLC52A2Q9HAB3 445 aa24.02■■□□□ 1.44
DMD-208ENST00000378680 CHMP4BQ9H444 224 aaKnown RBP24.02■■□□□ 1.44
DMD-208ENST00000378680 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
DMD-208ENST00000378680 NUTM2BA6NNL0 878 aaPredicted RBP24.01■■□□□ 1.43
DMD-208ENST00000378680 NUTM2EB1AL46 878 aaPredicted RBP24.01■■□□□ 1.43
DMD-208ENST00000378680 NUTM2AQ8IVF1 878 aaPredicted RBP24.01■■□□□ 1.43
DMD-208ENST00000378680 CACNA1FO60840 1977 aa24.01■■□□□ 1.43
DMD-208ENST00000378680 ABCC4O15439 1325 aa24.01■■□□□ 1.43
DMD-208ENST00000378680 PLCH1Q4KWH8 1693 aa24.01■■□□□ 1.43
DMD-208ENST00000378680 KCNQ3O43525 872 aa23.99■■□□□ 1.43
DMD-208ENST00000378680 KDM2BQ8NHM5 1336 aa23.99■■□□□ 1.43
DMD-208ENST00000378680 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
DMD-208ENST00000378680 MRC1P22897 1456 aa23.98■■□□□ 1.43
DMD-208ENST00000378680 NFATC2IPQ8NCF5 419 aa23.98■■□□□ 1.43
DMD-208ENST00000378680 CABP4P57796 275 aa23.96■■□□□ 1.43
DMD-208ENST00000378680 NECTIN2Q92692 538 aa23.96■■□□□ 1.43
DMD-208ENST00000378680 JCADQ9P266 1359 aa23.96■■□□□ 1.43
DMD-208ENST00000378680 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
DMD-208ENST00000378680 SHANK3Q9BYB0 1731 aa23.95■■□□□ 1.42
DMD-208ENST00000378680 EIF2S2P20042 333 aaKnown RBP23.94■■□□□ 1.42
DMD-208ENST00000378680 NKX1-1Q15270 411 aaPredicted RBP23.94■■□□□ 1.42
DMD-208ENST00000378680 ZNF790Q6PG37 636 aa23.94■■□□□ 1.42
DMD-208ENST00000378680 NRAPQ86VF7 1730 aa23.93■■□□□ 1.42
DMD-208ENST00000378680 ZBTB40Q9NUA8 1239 aa23.93■■□□□ 1.42
DMD-208ENST00000378680 NWD2Q9ULI1 1742 aa23.93■■□□□ 1.42
DMD-208ENST00000378680 HEG1Q9ULI3 1381 aa23.93■■□□□ 1.42
DMD-208ENST00000378680 PCDHB15Q9Y5E8 787 aa23.93■■□□□ 1.42
DMD-208ENST00000378680 RGS12O14924 1447 aa23.92■■□□□ 1.42
DMD-208ENST00000378680 ERVV-2B6SEH9 535 aa23.92■■□□□ 1.42
DMD-208ENST00000378680 GIGYF1O75420 1035 aaPredicted RBP23.92■■□□□ 1.42
DMD-208ENST00000378680 G2E3Q7L622 706 aa23.92■■□□□ 1.42
DMD-208ENST00000378680 TTC5Q8N0Z6 440 aa23.92■■□□□ 1.42
DMD-208ENST00000378680 DISP2A7MBM2 1401 aa23.92■■□□□ 1.42
DMD-208ENST00000378680 FLIIQ13045 1269 aa23.92■■□□□ 1.42
DMD-208ENST00000378680 INTS3Q68E01 1043 aaKnown RBP23.92■■□□□ 1.42
DMD-208ENST00000378680 RWDD1Q9H446 243 aaPredicted RBP23.92■■□□□ 1.42
DMD-208ENST00000378680 ZBTB7BO15156 539 aaPredicted RBP23.91■■□□□ 1.42
DMD-208ENST00000378680 IGHDP01880 384 aa23.91■■□□□ 1.42
DMD-208ENST00000378680 SLC39A6Q13433 755 aa23.91■■□□□ 1.42
DMD-208ENST00000378680 THRAP3Q9Y2W1 955 aaKnown RBP23.9■■□□□ 1.42
DMD-208ENST00000378680 WNK3Q9BYP7 1800 aa23.89■■□□□ 1.42
DMD-208ENST00000378680 FKBP5Q13451 457 aaPredicted RBP23.89■■□□□ 1.41
DMD-208ENST00000378680 CDCA7Q9BWT1 371 aaPredicted RBP23.89■■□□□ 1.41
DMD-208ENST00000378680 SLIT2O94813 1529 aa23.88■■□□□ 1.41
DMD-208ENST00000378680 SPATA31A1Q5TZJ5 1347 aa23.87■■□□□ 1.41
DMD-208ENST00000378680 EXOC5O00471 708 aa23.87■■□□□ 1.41
DMD-208ENST00000378680 CHPF2Q9P2E5 772 aa23.87■■□□□ 1.41
DMD-208ENST00000378680 DBF4Q9UBU7 674 aaPredicted RBP23.87■■□□□ 1.41
DMD-208ENST00000378680 SPATA31A6Q5VVP1 1343 aa23.86■■□□□ 1.41
DMD-208ENST00000378680 CCT4P50991 539 aaKnown RBP23.86■■□□□ 1.41
DMD-208ENST00000378680 FMNL2Q96PY5 1086 aa23.86■■□□□ 1.41
DMD-208ENST00000378680 SLC4A10Q6U841 1118 aa23.85■■□□□ 1.41
DMD-208ENST00000378680 F6X3S4 739 aa23.84■■□□□ 1.41
DMD-208ENST00000378680 ZNF496Q96IT1 587 aaPredicted RBP23.84■■□□□ 1.41
DMD-208ENST00000378680 CCDC9Q9Y3X0 531 aaKnown RBP23.84■■□□□ 1.41
DMD-208ENST00000378680 SNRPA1P09661 255 aaKnown RBP23.83■■□□□ 1.41
DMD-208ENST00000378680 HDAC1Q13547 482 aaPredicted RBP23.83■■□□□ 1.41
DMD-208ENST00000378680 PHAXQ9H814 394 aaKnown RBP23.83■■□□□ 1.41
DMD-208ENST00000378680 TSHZ2Q9NRE2 1034 aa23.83■■□□□ 1.41
DMD-208ENST00000378680 SPATA31A5Q5VU36 1347 aa23.83■■□□□ 1.41
DMD-208ENST00000378680 SPATA31A7Q8IWB4 1347 aa23.83■■□□□ 1.41
DMD-208ENST00000378680 NGLY1Q96IV0 654 aa23.83■■□□□ 1.4
DMD-208ENST00000378680 C8orf37Q96NL8 207 aa23.83■■□□□ 1.4
DMD-208ENST00000378680 PRAMEF22A3QJZ6 481 aa23.82■■□□□ 1.4
DMD-208ENST00000378680 UNC5CLQ8IV45 518 aa23.82■■□□□ 1.4
DMD-208ENST00000378680 C5P01031 1676 aa23.82■■□□□ 1.4
DMD-208ENST00000378680 TNS2Q63HR2 1409 aa23.81■■□□□ 1.4
DMD-208ENST00000378680 HYPKQ9NX55 129 aa23.81■■□□□ 1.4
DMD-208ENST00000378680 TMOD3Q9NYL9 352 aa23.81■■□□□ 1.4
DMD-208ENST00000378680 PXDNLA1KZ92 1463 aa23.81■■□□□ 1.4
DMD-208ENST00000378680 TOGARAM1Q9Y4F4 1720 aa23.8■■□□□ 1.4
DMD-208ENST00000378680 DDX21Q9NR30 783 aaKnown RBP eCLIP23.79■■□□□ 1.4
DMD-208ENST00000378680 BARGINQ6ZT62 677 aa23.79■■□□□ 1.4
DMD-208ENST00000378680 PAPPAQ13219 1627 aa23.79■■□□□ 1.4
DMD-208ENST00000378680 DDB1Q16531 1140 aa23.78■■□□□ 1.4
DMD-208ENST00000378680 N4BP2Q86UW6 1770 aaPredicted RBP23.77■■□□□ 1.4
DMD-208ENST00000378680 UBR2Q8IWV8 1755 aa23.77■■□□□ 1.4
DMD-208ENST00000378680 ANXA1P04083 346 aa23.77■■□□□ 1.4
DMD-208ENST00000378680 HSPA1LP34931 641 aa23.77■■□□□ 1.4
DMD-208ENST00000378680 C1orf115Q9H7X2 142 aa23.77■■□□□ 1.4
DMD-208ENST00000378680 LRP6O75581 1613 aa23.77■■□□□ 1.4
DMD-208ENST00000378680 LAMB4A4D0S4 1761 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms