RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 PLEKHM2Q8IWE5 1019 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 C16orf71Q8IYS4 520 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 CABP1Q9NZU7 370 aa10.66□□□□□ -0.7
CRNKL1-201ENST00000377327 CALRP27797 417 aaKnown RBP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 TRMT2AQ8IZ69 625 aaKnown RBP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 SRGAP3O43295 1099 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 TRDNQ13061 729 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 MLECQ14165 292 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 PRPF40BQ6NWY9 871 aaKnown RBP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 DCTPP1Q9H773 170 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 COL17A1Q9UMD9 1497 aaPredicted RBP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 SNAPC4Q5SXM2 1469 aa10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
CRNKL1-201ENST00000377327 DDX58O95786 925 aaKnown RBP10.65□□□□□ -0.71
CRNKL1-201ENST00000377327 CFAP100Q494V2 611 aa10.65□□□□□ -0.71
CRNKL1-201ENST00000377327 TAF7LQ5H9L4 462 aa10.65□□□□□ -0.71
CRNKL1-201ENST00000377327 PLCD3Q8N3E9 789 aa10.65□□□□□ -0.71
CRNKL1-201ENST00000377327 ANKRD44Q8N8A2 993 aa10.65□□□□□ -0.71
CRNKL1-201ENST00000377327 PZPP20742 1482 aa10.65□□□□□ -0.71
CRNKL1-201ENST00000377327 ANO6Q4KMQ2 910 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 PRAM1Q96QH2 718 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 NUP160Q12769 1436 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 SYNJ2O15056 1496 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 PDE1AP54750 535 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 JMYQ8N9B5 988 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 GLRX3O76003 335 aaKnown RBP10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 LMAN1P49257 510 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 SAFBQ15424 915 aaKnown RBP eCLIP10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 GBP3Q9H0R5 595 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 LAMC3Q9Y6N6 1575 aa10.64□□□□□ -0.71
CRNKL1-201ENST00000377327 DHX16O60231 1041 aaKnown RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 F13A1P00488 732 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 AKAP17AQ02040 695 aaKnown RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 RALYLQ86SE5 291 aaKnown RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 SMARCE1Q969G3 411 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 KIAA0754O94854 1291 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 KRT32Q14532 448 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 KIF1BPQ96EK5 621 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 DDX11Q96FC9 970 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 PCMTD1Q96MG8 357 aaPredicted RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 IRX3P78415 501 aaPredicted RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 TYRO3Q06418 890 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 STX1AQ16623 288 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 PPFIBP1Q86W92 1011 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 IQGAP2Q13576 1575 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 DNM1Q05193 864 aaKnown RBP10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 DCTN1Q14203 1278 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 TSHZ3Q63HK5 1081 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 DACT1Q9NYF0 836 aa10.63□□□□□ -0.71
CRNKL1-201ENST00000377327 NSD2O96028 1365 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 CARD14Q9BXL6 1004 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 A0A0G2JS52 829 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 HDGFL1Q5TGJ6 251 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 MRPL50Q8N5N7 158 aaKnown RBP10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 VGLL3A8MV65 326 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 CASQ1P31415 396 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 GTF2A1P52655 376 aaPredicted RBP10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 CDK19Q9BWU1 502 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 TRIM34Q9BYJ4 488 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 ARHGEF11O15085 1522 aa10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 GPATCH8Q9UKJ3 1502 aaKnown RBP10.62□□□□□ -0.71
CRNKL1-201ENST00000377327 PTPRCP08575 1304 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 F6X3S4 739 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 ARFGAP3Q9NP61 516 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 KIAA0586Q9BVV6 1533 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 GPT2Q8TD30 523 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 KIF14Q15058 1648 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 CCDC150Q8NCX0 1101 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 ERO1AQ96HE7 468 aa10.61□□□□□ -0.71
CRNKL1-201ENST00000377327 TUBB4AP04350 444 aa10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 CDR1P51861 262 aa10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 NFXL1Q6ZNB6 911 aa10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 LUZP1Q86V48 1076 aa10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
CRNKL1-201ENST00000377327 RPGRIP1LQ68CZ1 1315 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms