RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ZNF396Q96N95 335 aaPredicted RBP11.97□□□□□ -0.49
CD28-202ENST00000374481 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
CD28-202ENST00000374481 GOLGA6L10A6NI86 522 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 PPP2R5AQ15172 486 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 SYCP1Q15431 976 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 PYCARDQ9ULZ3 195 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 ZSCAN22P10073 491 aaPredicted RBP11.96□□□□□ -0.49
CD28-202ENST00000374481 NAA25Q14CX7 972 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 PPFIBP1Q86W92 1011 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 GPT2Q8TD30 523 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 NCAPGQ9BPX3 1015 aa11.96□□□□□ -0.49
CD28-202ENST00000374481 KIF5CO60282 957 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 EVCP57679 992 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 CCDC172P0C7W6 258 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 SMC1AQ14683 1233 aaKnown RBP11.96□□□□□ -0.5
CD28-202ENST00000374481 STK38Q15208 465 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 KIAA1524Q8TCG1 905 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 TNNQ9UQP3 1299 aa11.96□□□□□ -0.5
CD28-202ENST00000374481 LIG1P18858 919 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 ERCC6LQ2NKX8 1250 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 GOLGA6L9A6NEM1 432 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
CD28-202ENST00000374481 ERLIN2O94905 339 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 NCBP1Q09161 790 aaKnown RBP11.95□□□□□ -0.5
CD28-202ENST00000374481 DNAJC25Q9H1X3 360 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
CD28-202ENST00000374481 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 FAM69CQ0P6D2 419 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 ERC1Q8IUD2 1116 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
CD28-202ENST00000374481 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
CD28-202ENST00000374481 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
CD28-202ENST00000374481 TOP1P11387 765 aaKnown RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 MCM3P25205 808 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 FMNL3Q8IVF7 1028 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 PARD3Q8TEW0 1356 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 CTAGE5O15320 804 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 STX1AQ16623 288 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
CD28-202ENST00000374481 CPLX1O14810 134 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 VGFO15240 615 aaPredicted RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 INCENPQ9NQS7 918 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 TERF2IPQ9NYB0 399 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
CD28-202ENST00000374481 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
CD28-202ENST00000374481 STK3Q13188 491 aa11.93□□□□□ -0.5
CD28-202ENST00000374481 FILIP1LQ4L180 1135 aa11.93□□□□□ -0.5
CD28-202ENST00000374481 DACT1Q9NYF0 836 aa11.93□□□□□ -0.5
CD28-202ENST00000374481 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
CD28-202ENST00000374481 CEP83Q9Y592 693 aa11.93□□□□□ -0.5
CD28-202ENST00000374481 CLNS1AP54105 237 aaKnown RBP11.93□□□□□ -0.5
CD28-202ENST00000374481 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.93□□□□□ -0.5
CD28-202ENST00000374481 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
CD28-202ENST00000374481 ERBINQ96RT1 1412 aa11.93□□□□□ -0.5
CD28-202ENST00000374481 INPP5BP32019 993 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 LRMPQ12912 555 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 RPRD2Q5VT52 1461 aaKnown RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 HDXQ7Z353 690 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 RASSF8Q8NHQ8 419 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 AP1ARQ63HQ0 302 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 NAP1L1P55209 391 aaKnown RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
CD28-202ENST00000374481 FEZ2Q9UHY8 353 aaPredicted RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
CD28-202ENST00000374481 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 SMARCA5O60264 1052 aaPredicted RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 ANKRD1Q15327 319 aa11.91□□□□□ -0.5
CD28-202ENST00000374481 TWISTNBQ3B726 338 aaPredicted RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
CD28-202ENST00000374481 GEMIN8Q9NWZ8 242 aaKnown RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 POLA1P09884 1462 aaPredicted RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
CD28-202ENST00000374481 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 PKP1Q13835 747 aa11.91□□□□□ -0.5
CD28-202ENST00000374481 IQCEQ6IPM2 695 aa11.91□□□□□ -0.5
CD28-202ENST00000374481 CARD6Q9BX69 1037 aa11.91□□□□□ -0.5
CD28-202ENST00000374481 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
CD28-202ENST00000374481 TULP1O00294 542 aaPredicted RBP11.9□□□□□ -0.5
CD28-202ENST00000374481 ZSCAN25Q6NSZ9 544 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms