RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 FOXD4L3Q6VB84 417 aaPredicted RBP10.02□□□□□ -0.8
GARNL3-201ENST00000373386 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.8
GARNL3-201ENST00000373386 GNAI1P63096 354 aa10.02□□□□□ -0.81
GARNL3-201ENST00000373386 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-201ENST00000373386 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
GARNL3-201ENST00000373386 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
GARNL3-201ENST00000373386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.02□□□□□ -0.81
GARNL3-201ENST00000373386 TNNQ9UQP3 1299 aa10.02□□□□□ -0.81
GARNL3-201ENST00000373386 MRVI1Q9Y6F6 885 aa10.02□□□□□ -0.81
GARNL3-201ENST00000373386 NRDCO43847 1150 aa10.01□□□□□ -0.81
GARNL3-201ENST00000373386 RAD21O60216 631 aa10.01□□□□□ -0.81
GARNL3-201ENST00000373386 TSR2Q969E8 191 aaKnown RBP10.01□□□□□ -0.81
GARNL3-201ENST00000373386 NOB1Q9ULX3 412 aaKnown RBP10.01□□□□□ -0.81
GARNL3-201ENST00000373386 CCDC172P0C7W6 258 aa10.01□□□□□ -0.81
GARNL3-201ENST00000373386 SAFB2Q14151 953 aaKnown RBP eCLIP10.01□□□□□ -0.81
GARNL3-201ENST00000373386 METP08581 1390 aa10.01□□□□□ -0.81
GARNL3-201ENST00000373386 TMEM2Q9UHN6 1383 aa10.01□□□□□ -0.81
GARNL3-201ENST00000373386 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
GARNL3-201ENST00000373386 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 NUCB1Q02818 461 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 ZBTB9Q96C00 473 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 GCC1Q96CN9 775 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 TRIM34Q9BYJ4 488 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 ABCC4O15439 1325 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 TNRQ92752 1358 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 OVOS2A0A0J9YW53 1432 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 OVOS2Q6IE36 1432 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 SLIT1O75093 1534 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 MCM4P33991 863 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 CT47A1Q5JQC4 288 aaPredicted RBP10□□□□□ -0.81
GARNL3-201ENST00000373386 C22orf23Q9BZE7 217 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 USP31Q70CQ4 1352 aa10□□□□□ -0.81
GARNL3-201ENST00000373386 PRKAR2BP31323 418 aa9.99□□□□□ -0.81
GARNL3-201ENST00000373386 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
GARNL3-201ENST00000373386 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-201ENST00000373386 CCDC66A2RUB6 948 aa9.99□□□□□ -0.81
GARNL3-201ENST00000373386 DYNC1I1O14576 645 aa9.99□□□□□ -0.81
GARNL3-201ENST00000373386 TMEM57Q8N5G2 664 aa9.99□□□□□ -0.81
GARNL3-201ENST00000373386 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
GARNL3-201ENST00000373386 FMN2Q9NZ56 1722 aa9.99□□□□□ -0.81
GARNL3-201ENST00000373386 SSH2Q76I76 1423 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 NCOA3Q9Y6Q9 1424 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 FSD2A1L4K1 749 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 VAMP4O75379 141 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 ITPRIPQ8IWB1 547 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 ARHGAP23Q9P227 1491 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 KIAA0232Q92628 1395 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 MLECQ14165 292 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 MTA1Q13330 715 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 SPTY2D1Q68D10 685 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-201ENST00000373386 NUDT16Q96DE0 195 aaKnown RBP9.98□□□□□ -0.81
GARNL3-201ENST00000373386 COG3Q96JB2 828 aa9.98□□□□□ -0.81
GARNL3-201ENST00000373386 ZBTB7BO15156 539 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-201ENST00000373386 POLD1P28340 1107 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
GARNL3-201ENST00000373386 BMP2KLQ5H9B9 411 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 HSCBQ8IWL3 235 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 NCAPGQ9BPX3 1015 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 OFD1O75665 1012 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 WAPLQ7Z5K2 1190 aa9.97□□□□□ -0.81
GARNL3-201ENST00000373386 SNX21Q969T3 373 aa9.96□□□□□ -0.81
GARNL3-201ENST00000373386 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.81
GARNL3-201ENST00000373386 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.81
GARNL3-201ENST00000373386 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.81
GARNL3-201ENST00000373386 KCTD17Q8N5Z5 321 aa9.96□□□□□ -0.82
GARNL3-201ENST00000373386 TIGD1Q96MW7 591 aa9.96□□□□□ -0.82
GARNL3-201ENST00000373386 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
GARNL3-201ENST00000373386 MTMR7Q9Y216 660 aa9.96□□□□□ -0.82
GARNL3-201ENST00000373386 LRRC37A3O60309 1634 aa9.96□□□□□ -0.82
GARNL3-201ENST00000373386 ANKRD23Q86SG2 305 aa9.96□□□□□ -0.82
GARNL3-201ENST00000373386 USP6P35125 1406 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 PEAK1Q9H792 1746 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
GARNL3-201ENST00000373386 CHD1LQ86WJ1 897 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 ARHGEF10O15013 1369 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 PTPRUQ92729 1446 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 TRAK2O60296 914 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
GARNL3-201ENST00000373386 TTC21AQ8NDW8 1320 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 CALRP27797 417 aaKnown RBP9.94□□□□□ -0.82
GARNL3-201ENST00000373386 MRE11P49959 708 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-201ENST00000373386 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-201ENST00000373386 PHACTR3Q96KR7 559 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 TSPAN18Q96SJ8 248 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 KIF3AQ9Y496 699 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 XRN1Q8IZH2 1706 aaKnown RBP9.94□□□□□ -0.82
GARNL3-201ENST00000373386 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 ITFG2Q969R8 447 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
GARNL3-201ENST00000373386 MBIPQ9NS73 344 aa9.94□□□□□ -0.82
GARNL3-201ENST00000373386 ROBO2Q9HCK4 1378 aa9.93□□□□□ -0.82
GARNL3-201ENST00000373386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.93□□□□□ -0.82
GARNL3-201ENST00000373386 INTS3Q68E01 1043 aaKnown RBP9.93□□□□□ -0.82
GARNL3-201ENST00000373386 NME9Q86XW9 330 aa9.93□□□□□ -0.82
GARNL3-201ENST00000373386 EMILIN1Q9Y6C2 1016 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms