RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ITGB4P16144 1822 aa26.44■■□□□ 1.82
TRAPPC3-204ENST00000373166 UBR3Q6ZT12 1888 aa26.42■■□□□ 1.82
TRAPPC3-204ENST00000373166 MMP10P09238 476 aa26.42■■□□□ 1.82
TRAPPC3-204ENST00000373166 HSPA5P11021 654 aaKnown RBP26.42■■□□□ 1.82
TRAPPC3-204ENST00000373166 ATG3Q9NT62 314 aa26.42■■□□□ 1.82
TRAPPC3-204ENST00000373166 TRAPPC3LQ5T215 181 aa26.39■■□□□ 1.82
TRAPPC3-204ENST00000373166 POLKQ9UBT6 870 aa26.39■■□□□ 1.82
TRAPPC3-204ENST00000373166 RTCBQ9Y3I0 505 aaKnown RBP26.39■■□□□ 1.82
TRAPPC3-204ENST00000373166 MAP2P11137 1827 aaKnown RBP26.38■■□□□ 1.81
TRAPPC3-204ENST00000373166 TGFB2P61812 414 aa26.38■■□□□ 1.81
TRAPPC3-204ENST00000373166 NLGN1Q8N2Q7 840 aa26.38■■□□□ 1.81
TRAPPC3-204ENST00000373166 KIF3CO14782 793 aa26.37■■□□□ 1.81
TRAPPC3-204ENST00000373166 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
TRAPPC3-204ENST00000373166 ERVV-2B6SEH9 535 aa26.34■■□□□ 1.81
TRAPPC3-204ENST00000373166 EIF4A2Q14240 407 aaKnown RBP26.34■■□□□ 1.81
TRAPPC3-204ENST00000373166 RBM42Q9BTD8 480 aaKnown RBP26.34■■□□□ 1.81
TRAPPC3-204ENST00000373166 BCS1LQ9Y276 419 aa26.34■■□□□ 1.81
TRAPPC3-204ENST00000373166 PLEKHG2Q9H7P9 1386 aa26.33■■□□□ 1.81
TRAPPC3-204ENST00000373166 A0A0G2JLW4 131 aa26.33■■□□□ 1.81
TRAPPC3-204ENST00000373166 ADRA2BP18089 450 aa26.33■■□□□ 1.81
TRAPPC3-204ENST00000373166 PXDNLA1KZ92 1463 aa26.33■■□□□ 1.81
TRAPPC3-204ENST00000373166 ANKRD26Q9UPS8 1709 aa26.32■■□□□ 1.8
TRAPPC3-204ENST00000373166 HSP90AB1P08238 724 aaKnown RBP26.32■■□□□ 1.8
TRAPPC3-204ENST00000373166 RC3H1Q5TC82 1133 aaKnown RBP26.32■■□□□ 1.8
TRAPPC3-204ENST00000373166 TNNT2P45379 298 aaPredicted RBP26.31■■□□□ 1.8
TRAPPC3-204ENST00000373166 ARHGEF1Q92888 912 aaKnown RBP26.31■■□□□ 1.8
TRAPPC3-204ENST00000373166 DCAF5Q96JK2 942 aa26.31■■□□□ 1.8
TRAPPC3-204ENST00000373166 CCDC87Q9NVE4 849 aa26.31■■□□□ 1.8
TRAPPC3-204ENST00000373166 KDRP35968 1356 aa26.31■■□□□ 1.8
TRAPPC3-204ENST00000373166 CICQ96RK0 1608 aaPredicted RBP26.3■■□□□ 1.8
TRAPPC3-204ENST00000373166 RFC4P35249 363 aa26.3■■□□□ 1.8
TRAPPC3-204ENST00000373166 ARHGAP27Q6ZUM4 889 aa26.3■■□□□ 1.8
TRAPPC3-204ENST00000373166 SLC4A9Q96Q91 983 aa26.3■■□□□ 1.8
TRAPPC3-204ENST00000373166 APLP1P51693 650 aa26.29■■□□□ 1.8
TRAPPC3-204ENST00000373166 RPS6KA4O75676 772 aa26.28■■□□□ 1.8
TRAPPC3-204ENST00000373166 TOMM70O94826 608 aa26.28■■□□□ 1.8
TRAPPC3-204ENST00000373166 PLEKHO1Q53GL0 409 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC3-204ENST00000373166 PARP3Q9Y6F1 533 aa26.28■■□□□ 1.8
TRAPPC3-204ENST00000373166 CNTNAP4Q9C0A0 1308 aa26.28■■□□□ 1.8
TRAPPC3-204ENST00000373166 C10orf71Q711Q0 1435 aa26.28■■□□□ 1.8
TRAPPC3-204ENST00000373166 GYS1P13807 737 aa26.27■■□□□ 1.8
TRAPPC3-204ENST00000373166 FCHSD2O94868 740 aa26.26■■□□□ 1.79
TRAPPC3-204ENST00000373166 DPEP1P16444 411 aa26.26■■□□□ 1.79
TRAPPC3-204ENST00000373166 CABP4P57796 275 aa26.26■■□□□ 1.79
TRAPPC3-204ENST00000373166 AMOTQ4VCS5 1084 aa26.24■■□□□ 1.79
TRAPPC3-204ENST00000373166 ZNF530Q6P9A1 599 aaPredicted RBP26.23■■□□□ 1.79
TRAPPC3-204ENST00000373166 KIF13BQ9NQT8 1826 aa26.21■■□□□ 1.79
TRAPPC3-204ENST00000373166 MTHFSP49914 203 aa26.21■■□□□ 1.79
TRAPPC3-204ENST00000373166 ZNF831Q5JPB2 1677 aa26.2■■□□□ 1.78
TRAPPC3-204ENST00000373166 PTCD1O75127 700 aaKnown RBP26.2■■□□□ 1.78
TRAPPC3-204ENST00000373166 NMRK2Q9NPI5 230 aa26.2■■□□□ 1.78
TRAPPC3-204ENST00000373166 KCNA3P22001 575 aa26.19■■□□□ 1.78
TRAPPC3-204ENST00000373166 C1orf141Q5JVX7 400 aa26.19■■□□□ 1.78
TRAPPC3-204ENST00000373166 PIM2Q9P1W9 311 aa26.19■■□□□ 1.78
TRAPPC3-204ENST00000373166 KDM6AO15550 1401 aaPredicted RBP26.18■■□□□ 1.78
TRAPPC3-204ENST00000373166 C9orf131Q5VYM1 1079 aa26.18■■□□□ 1.78
TRAPPC3-204ENST00000373166 KIAA1551Q9HCM1 1747 aa26.18■■□□□ 1.78
TRAPPC3-204ENST00000373166 N4BP2Q86UW6 1770 aaPredicted RBP26.18■■□□□ 1.78
TRAPPC3-204ENST00000373166 C4AP0C0L4 1744 aa26.17■■□□□ 1.78
TRAPPC3-204ENST00000373166 CRKLP46109 303 aaKnown RBP26.17■■□□□ 1.78
TRAPPC3-204ENST00000373166 DNAJC5GQ8N7S2 189 aa26.17■■□□□ 1.78
TRAPPC3-204ENST00000373166 C16orf71Q8IYS4 520 aaPredicted RBP26.16■■□□□ 1.78
TRAPPC3-204ENST00000373166 NFATC2IPQ8NCF5 419 aa26.16■■□□□ 1.78
TRAPPC3-204ENST00000373166 DALRD3Q5D0E6 543 aaKnown RBP26.15■■□□□ 1.78
TRAPPC3-204ENST00000373166 RBM46Q8TBY0 533 aaKnown RBP26.15■■□□□ 1.78
TRAPPC3-204ENST00000373166 FKBP8Q14318 412 aa26.14■■□□□ 1.78
TRAPPC3-204ENST00000373166 PANK3Q9H999 370 aa26.14■■□□□ 1.78
TRAPPC3-204ENST00000373166 SRP68Q9UHB9 627 aaKnown RBP26.14■■□□□ 1.78
TRAPPC3-204ENST00000373166 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.77
TRAPPC3-204ENST00000373166 AEBP1Q8IUX7 1158 aa26.13■■□□□ 1.77
TRAPPC3-204ENST00000373166 COL5A3P25940 1745 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC3-204ENST00000373166 KIF7Q2M1P5 1343 aa26.13■■□□□ 1.77
TRAPPC3-204ENST00000373166 KDM2BQ8NHM5 1336 aa26.12■■□□□ 1.77
TRAPPC3-204ENST00000373166 DDR1Q08345 913 aa26.11■■□□□ 1.77
TRAPPC3-204ENST00000373166 MORC1Q86VD1 984 aa26.11■■□□□ 1.77
TRAPPC3-204ENST00000373166 SULT6B1Q6IMI4 303 aa26.1■■□□□ 1.77
TRAPPC3-204ENST00000373166 FSTL1Q12841 308 aa26.09■■□□□ 1.77
TRAPPC3-204ENST00000373166 RNF181Q9P0P0 153 aa26.09■■□□□ 1.77
TRAPPC3-204ENST00000373166 INTS5Q6P9B9 1019 aaKnown RBP26.08■■□□□ 1.77
TRAPPC3-204ENST00000373166 ZPR1O75312 459 aa26.07■■□□□ 1.76
TRAPPC3-204ENST00000373166 CHRNA5P30532 468 aa26.07■■□□□ 1.76
TRAPPC3-204ENST00000373166 POLRMTO00411 1230 aaKnown RBP26.06■■□□□ 1.76
TRAPPC3-204ENST00000373166 TM4SF1P30408 202 aa26.06■■□□□ 1.76
TRAPPC3-204ENST00000373166 MYH14Q7Z406 1995 aaKnown RBP26.06■■□□□ 1.76
TRAPPC3-204ENST00000373166 RRAGCQ9HB90 399 aa26.04■■□□□ 1.76
TRAPPC3-204ENST00000373166 BRCA1P38398 1863 aaKnown RBP26.04■■□□□ 1.76
TRAPPC3-204ENST00000373166 KCPQ6ZWJ8 1503 aa26.04■■□□□ 1.76
TRAPPC3-204ENST00000373166 AKAP4Q5JQC9 854 aa26.03■■□□□ 1.76
TRAPPC3-204ENST00000373166 USPL1Q5W0Q7 1092 aa26.03■■□□□ 1.76
TRAPPC3-204ENST00000373166 DNAJC10Q8IXB1 793 aa26.03■■□□□ 1.76
TRAPPC3-204ENST00000373166 KLRG1Q96E93 195 aa26.03■■□□□ 1.76
TRAPPC3-204ENST00000373166 KNSTRNQ9Y448 316 aa26.03■■□□□ 1.76
TRAPPC3-204ENST00000373166 IL13P35225 146 aa26.02■■□□□ 1.76
TRAPPC3-204ENST00000373166 HTRA3P83110 453 aa26.01■■□□□ 1.75
TRAPPC3-204ENST00000373166 SLC52A2Q9HAB3 445 aa26.01■■□□□ 1.75
TRAPPC3-204ENST00000373166 ARFGEF1Q9Y6D6 1849 aa26.01■■□□□ 1.75
TRAPPC3-204ENST00000373166 SOS1Q07889 1333 aaPredicted RBP26■■□□□ 1.75
TRAPPC3-204ENST00000373166 CYP19A1P11511 503 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC3-204ENST00000373166 JMYQ8N9B5 988 aa25.98■■□□□ 1.75
TRAPPC3-204ENST00000373166 LGR6Q9HBX8 967 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms