RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 RABEP1Q15276 862 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
TRERF1-203ENST00000372917 ZGPATQ8N5A5 531 aaKnown RBP12.63□□□□□ -0.39
TRERF1-203ENST00000372917 JMYQ8N9B5 988 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 KIF2CQ99661 725 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 PDRG1Q9NUG6 133 aa12.63□□□□□ -0.39
TRERF1-203ENST00000372917 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
TRERF1-203ENST00000372917 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
TRERF1-203ENST00000372917 SETQ01105 290 aaPredicted RBP12.62□□□□□ -0.39
TRERF1-203ENST00000372917 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 TMCO3Q6UWJ1 677 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 BORCS6Q96GS4 357 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 OAS2P29728 719 aaKnown RBP12.62□□□□□ -0.39
TRERF1-203ENST00000372917 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
TRERF1-203ENST00000372917 MICALL1Q8N3F8 863 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
TRERF1-203ENST00000372917 ZMYM3Q14202 1370 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 SKIDA1Q1XH10 827 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
TRERF1-203ENST00000372917 SMC2O95347 1197 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 CAND2O75155 1236 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 CLCN6P51797 869 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
TRERF1-203ENST00000372917 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 PTPRCP08575 1304 aa12.61□□□□□ -0.39
TRERF1-203ENST00000372917 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
TRERF1-203ENST00000372917 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
TRERF1-203ENST00000372917 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
TRERF1-203ENST00000372917 TRDNQ13061 729 aa12.6□□□□□ -0.39
TRERF1-203ENST00000372917 KIF3CO14782 793 aa12.6□□□□□ -0.39
TRERF1-203ENST00000372917 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
TRERF1-203ENST00000372917 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
TRERF1-203ENST00000372917 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 ARGLU1Q9NWB6 273 aaPredicted RBP12.59□□□□□ -0.39
TRERF1-203ENST00000372917 IVLP07476 585 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 RLBP1P12271 317 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 ITFG2Q969R8 447 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 TESK2Q96S53 571 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.59□□□□□ -0.39
TRERF1-203ENST00000372917 RAD50Q92878 1312 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
TRERF1-203ENST00000372917 PTPN14Q15678 1187 aa12.59□□□□□ -0.39
TRERF1-203ENST00000372917 PAIP2Q9BPZ3 127 aaKnown RBP12.59□□□□□ -0.39
TRERF1-203ENST00000372917 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.39
TRERF1-203ENST00000372917 ACTN2P35609 894 aa12.58□□□□□ -0.39
TRERF1-203ENST00000372917 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.39
TRERF1-203ENST00000372917 E9PCH4 1651 aa12.58□□□□□ -0.4
TRERF1-203ENST00000372917 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
TRERF1-203ENST00000372917 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
TRERF1-203ENST00000372917 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRERF1-203ENST00000372917 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
TRERF1-203ENST00000372917 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
TRERF1-203ENST00000372917 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
TRERF1-203ENST00000372917 RNF20Q5VTR2 975 aa12.58□□□□□ -0.4
TRERF1-203ENST00000372917 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.4
TRERF1-203ENST00000372917 HMGB1P09429 215 aaKnown RBP12.57□□□□□ -0.4
TRERF1-203ENST00000372917 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
TRERF1-203ENST00000372917 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
TRERF1-203ENST00000372917 GBP6Q6ZN66 633 aa12.57□□□□□ -0.4
TRERF1-203ENST00000372917 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
TRERF1-203ENST00000372917 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
TRERF1-203ENST00000372917 TRMT1Q9NXH9 659 aaKnown RBP12.57□□□□□ -0.4
TRERF1-203ENST00000372917 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
TRERF1-203ENST00000372917 GPRASP1Q5JY77 1395 aa12.57□□□□□ -0.4
TRERF1-203ENST00000372917 CPSF2Q9P2I0 782 aaKnown RBP12.56□□□□□ -0.4
TRERF1-203ENST00000372917 ZDHHC9Q9Y397 364 aa12.56□□□□□ -0.4
TRERF1-203ENST00000372917 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
TRERF1-203ENST00000372917 IPO7O95373 1038 aaKnown RBP12.56□□□□□ -0.4
TRERF1-203ENST00000372917 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
TRERF1-203ENST00000372917 SEC31AO94979 1220 aaKnown RBP12.56□□□□□ -0.4
TRERF1-203ENST00000372917 AP1ARQ63HQ0 302 aa12.56□□□□□ -0.4
TRERF1-203ENST00000372917 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
TRERF1-203ENST00000372917 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
TRERF1-203ENST00000372917 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
TRERF1-203ENST00000372917 CEP170Q5SW79 1584 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 KIF2AO00139 706 aaPredicted RBP12.55□□□□□ -0.4
TRERF1-203ENST00000372917 AP5Z1O43299 807 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 PAX7P23759 505 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
TRERF1-203ENST00000372917 SMC1AQ14683 1233 aaKnown RBP12.55□□□□□ -0.4
TRERF1-203ENST00000372917 ITPRIPQ8IWB1 547 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 NRBP1Q9UHY1 535 aa12.55□□□□□ -0.4
TRERF1-203ENST00000372917 CASTP20810 708 aaKnown RBP12.54□□□□□ -0.4
TRERF1-203ENST00000372917 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
TRERF1-203ENST00000372917 TBC1D22AQ8WUA7 517 aa12.54□□□□□ -0.4
TRERF1-203ENST00000372917 JPH2Q9BR39 696 aaPredicted RBP12.54□□□□□ -0.4
TRERF1-203ENST00000372917 ADAM21Q9UKJ8 722 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms