RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 TSPYL4Q9UJ04 414 aa23.74■■□□□ 1.39
VEGFA-206ENST00000372077 MIS18AQ9NYP9 233 aa23.73■■□□□ 1.39
VEGFA-206ENST00000372077 TEFQ10587 303 aa23.73■■□□□ 1.39
VEGFA-206ENST00000372077 SIPA1L3O60292 1781 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-206ENST00000372077 FBXO41Q8TF61 875 aa23.72■■□□□ 1.39
VEGFA-206ENST00000372077 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
VEGFA-206ENST00000372077 MRC1P22897 1456 aa23.71■■□□□ 1.39
VEGFA-206ENST00000372077 AFF2P51816 1311 aa23.71■■□□□ 1.39
VEGFA-206ENST00000372077 RARSP54136 660 aaKnown RBP23.71■■□□□ 1.39
VEGFA-206ENST00000372077 EXOC5O00471 708 aa23.7■■□□□ 1.38
VEGFA-206ENST00000372077 RRP1P56182 461 aaKnown RBP23.7■■□□□ 1.38
VEGFA-206ENST00000372077 C8orf58Q8NAV2 365 aa23.7■■□□□ 1.38
VEGFA-206ENST00000372077 TNS2Q63HR2 1409 aa23.7■■□□□ 1.38
VEGFA-206ENST00000372077 VAMP4O75379 141 aa23.69■■□□□ 1.38
VEGFA-206ENST00000372077 DDX54Q8TDD1 881 aaKnown RBP23.69■■□□□ 1.38
VEGFA-206ENST00000372077 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
VEGFA-206ENST00000372077 SLC52A2Q9HAB3 445 aa23.69■■□□□ 1.38
VEGFA-206ENST00000372077 KDM3BQ7LBC6 1761 aa23.69■■□□□ 1.38
VEGFA-206ENST00000372077 ZNF428Q96B54 188 aa23.69■■□□□ 1.38
VEGFA-206ENST00000372077 BCAR3O75815 825 aa23.67■■□□□ 1.38
VEGFA-206ENST00000372077 TWISTNBQ3B726 338 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-206ENST00000372077 ATRNO75882 1429 aa23.66■■□□□ 1.38
VEGFA-206ENST00000372077 BTBD11A6QL63 1104 aa23.66■■□□□ 1.38
VEGFA-206ENST00000372077 ERVV-2B6SEH9 535 aa23.65■■□□□ 1.38
VEGFA-206ENST00000372077 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
VEGFA-206ENST00000372077 DDB1Q16531 1140 aa23.65■■□□□ 1.38
VEGFA-206ENST00000372077 ERICH6BQ5W0A0 696 aa23.65■■□□□ 1.38
VEGFA-206ENST00000372077 ALDH1L2Q3SY69 923 aa23.64■■□□□ 1.38
VEGFA-206ENST00000372077 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.38
VEGFA-206ENST00000372077 ELL2O00472 640 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-206ENST00000372077 TRPC5Q9UL62 973 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-206ENST00000372077 GLI3P10071 1580 aa23.63■■□□□ 1.37
VEGFA-206ENST00000372077 FAM98CQ17RN3 349 aaKnown RBP23.63■■□□□ 1.37
VEGFA-206ENST00000372077 SSH1Q8WYL5 1049 aa23.63■■□□□ 1.37
VEGFA-206ENST00000372077 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-206ENST00000372077 CABP4P57796 275 aa23.62■■□□□ 1.37
VEGFA-206ENST00000372077 EIF4A1P60842 406 aaKnown RBP23.62■■□□□ 1.37
VEGFA-206ENST00000372077 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-206ENST00000372077 TOGARAM1Q9Y4F4 1720 aa23.61■■□□□ 1.37
VEGFA-206ENST00000372077 KCNQ3O43525 872 aa23.61■■□□□ 1.37
VEGFA-206ENST00000372077 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-206ENST00000372077 THSD7AQ9UPZ6 1657 aa23.6■■□□□ 1.37
VEGFA-206ENST00000372077 BRPF1P55201 1214 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-206ENST00000372077 HEG1Q9ULI3 1381 aa23.59■■□□□ 1.37
VEGFA-206ENST00000372077 BCL2L13Q9BXK5 485 aa23.59■■□□□ 1.37
VEGFA-206ENST00000372077 SMC4Q9NTJ3 1288 aa23.59■■□□□ 1.37
VEGFA-206ENST00000372077 ZNF790Q6PG37 636 aa23.58■■□□□ 1.37
VEGFA-206ENST00000372077 ONECUT3O60422 494 aaPredicted RBP23.58■■□□□ 1.36
VEGFA-206ENST00000372077 MARCH10Q8NA82 808 aaPredicted RBP23.58■■□□□ 1.36
VEGFA-206ENST00000372077 QTRT2Q9H974 415 aaKnown RBP23.57■■□□□ 1.36
VEGFA-206ENST00000372077 NOP58Q9Y2X3 529 aaKnown RBP23.57■■□□□ 1.36
VEGFA-206ENST00000372077 C20orf194Q5TEA3 1177 aa23.56■■□□□ 1.36
VEGFA-206ENST00000372077 MRPL50Q8N5N7 158 aaKnown RBP23.56■■□□□ 1.36
VEGFA-206ENST00000372077 HOXB7P09629 217 aa23.56■■□□□ 1.36
VEGFA-206ENST00000372077 SLC39A6Q13433 755 aa23.55■■□□□ 1.36
VEGFA-206ENST00000372077 PAPPAQ13219 1627 aa23.54■■□□□ 1.36
VEGFA-206ENST00000372077 ITGB4P16144 1822 aa23.53■■□□□ 1.36
VEGFA-206ENST00000372077 TMOD3Q9NYL9 352 aa23.52■■□□□ 1.36
VEGFA-206ENST00000372077 KIF16BQ96L93 1317 aa23.52■■□□□ 1.36
VEGFA-206ENST00000372077 GIGYF1O75420 1035 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-206ENST00000372077 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-206ENST00000372077 ZNF772Q68DY9 489 aaPredicted RBP23.51■■□□□ 1.35
VEGFA-206ENST00000372077 TTC5Q8N0Z6 440 aa23.51■■□□□ 1.35
VEGFA-206ENST00000372077 TCERG1O14776 1098 aaKnown RBP23.51■■□□□ 1.35
VEGFA-206ENST00000372077 PDE3AQ14432 1141 aa23.51■■□□□ 1.35
VEGFA-206ENST00000372077 PIGBQ92521 554 aa23.51■■□□□ 1.35
VEGFA-206ENST00000372077 CRBNQ96SW2 442 aa23.51■■□□□ 1.35
VEGFA-206ENST00000372077 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
VEGFA-206ENST00000372077 BCL9O00512 1426 aa23.5■■□□□ 1.35
VEGFA-206ENST00000372077 DOT1LQ8TEK3 1739 aa23.5■■□□□ 1.35
VEGFA-206ENST00000372077 CCDC30Q5VVM6 783 aa23.5■■□□□ 1.35
VEGFA-206ENST00000372077 ZKSCAN2Q63HK3 967 aa23.5■■□□□ 1.35
VEGFA-206ENST00000372077 ZNF496Q96IT1 587 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-206ENST00000372077 UBR2Q8IWV8 1755 aa23.5■■□□□ 1.35
VEGFA-206ENST00000372077 ANP32AP39687 249 aaKnown RBP23.5■■□□□ 1.35
VEGFA-206ENST00000372077 CANXP27824 592 aaKnown RBP23.49■■□□□ 1.35
VEGFA-206ENST00000372077 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
VEGFA-206ENST00000372077 ARHGAP45Q92619 1136 aa23.48■■□□□ 1.35
VEGFA-206ENST00000372077 FMNL2Q96PY5 1086 aa23.48■■□□□ 1.35
VEGFA-206ENST00000372077 A0A0G2JS52 829 aa23.48■■□□□ 1.35
VEGFA-206ENST00000372077 IPO8O15397 1037 aaKnown RBP23.48■■□□□ 1.35
VEGFA-206ENST00000372077 KCPQ6ZWJ8 1503 aa23.47■■□□□ 1.35
VEGFA-206ENST00000372077 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
VEGFA-206ENST00000372077 HDGFL1Q5TGJ6 251 aa23.47■■□□□ 1.35
VEGFA-206ENST00000372077 ATF7IPQ6VMQ6 1270 aa23.46■■□□□ 1.35
VEGFA-206ENST00000372077 SEPT12Q8IYM1 358 aa23.46■■□□□ 1.35
VEGFA-206ENST00000372077 SLC4A2P04920 1241 aa23.46■■□□□ 1.35
VEGFA-206ENST00000372077 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
VEGFA-206ENST00000372077 TRIM27P14373 513 aa23.45■■□□□ 1.34
VEGFA-206ENST00000372077 STK31Q9BXU1 1019 aa23.45■■□□□ 1.34
VEGFA-206ENST00000372077 C5P01031 1676 aa23.45■■□□□ 1.34
VEGFA-206ENST00000372077 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
VEGFA-206ENST00000372077 SNRPA1P09661 255 aaKnown RBP23.45■■□□□ 1.34
VEGFA-206ENST00000372077 ATG3Q9NT62 314 aa23.45■■□□□ 1.34
VEGFA-206ENST00000372077 CACNA1FO60840 1977 aa23.44■■□□□ 1.34
VEGFA-206ENST00000372077 MS4A1P11836 297 aa23.44■■□□□ 1.34
VEGFA-206ENST00000372077 DEKP35659 375 aaKnown RBP23.44■■□□□ 1.34
VEGFA-206ENST00000372077 EIF2S2P20042 333 aaKnown RBP23.44■■□□□ 1.34
VEGFA-206ENST00000372077 RBM6P78332 1123 aaKnown RBP23.43■■□□□ 1.34
VEGFA-206ENST00000372077 NECTIN2Q92692 538 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms