RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 KAT6BQ8WYB5 2073 aa23.35■■□□□ 1.33
CCDC17-201ENST00000372044 BRPF1P55201 1214 aaPredicted RBP23.35■■□□□ 1.33
CCDC17-201ENST00000372044 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
CCDC17-201ENST00000372044 MRC1P22897 1456 aa23.35■■□□□ 1.33
CCDC17-201ENST00000372044 DISP2A7MBM2 1401 aa23.35■■□□□ 1.33
CCDC17-201ENST00000372044 SLIT2O94813 1529 aa23.34■■□□□ 1.33
CCDC17-201ENST00000372044 LRP6O75581 1613 aa23.34■■□□□ 1.33
CCDC17-201ENST00000372044 BTBD11A6QL63 1104 aa23.34■■□□□ 1.33
CCDC17-201ENST00000372044 C5P01031 1676 aa23.33■■□□□ 1.33
CCDC17-201ENST00000372044 KIF16BQ96L93 1317 aa23.33■■□□□ 1.33
CCDC17-201ENST00000372044 ATF7IPQ6VMQ6 1270 aa23.33■■□□□ 1.33
CCDC17-201ENST00000372044 CCDC136Q96JN2 1154 aa23.33■■□□□ 1.33
CCDC17-201ENST00000372044 ITGB4P16144 1822 aa23.32■■□□□ 1.32
CCDC17-201ENST00000372044 PCDH11XQ9BZA7 1347 aa23.32■■□□□ 1.32
CCDC17-201ENST00000372044 PCDH11YQ9BZA8 1340 aa23.32■■□□□ 1.32
CCDC17-201ENST00000372044 HSPA1LP34931 641 aa23.31■■□□□ 1.32
CCDC17-201ENST00000372044 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
CCDC17-201ENST00000372044 DZIP1LQ8IYY4 767 aaKnown RBP23.3■■□□□ 1.32
CCDC17-201ENST00000372044 SLC52A2Q9HAB3 445 aa23.3■■□□□ 1.32
CCDC17-201ENST00000372044 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
CCDC17-201ENST00000372044 DCAF5Q96JK2 942 aa23.3■■□□□ 1.32
CCDC17-201ENST00000372044 DDX54Q8TDD1 881 aaKnown RBP23.29■■□□□ 1.32
CCDC17-201ENST00000372044 NECTIN2Q92692 538 aa23.28■■□□□ 1.32
CCDC17-201ENST00000372044 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
CCDC17-201ENST00000372044 FTSJ3Q8IY81 847 aaKnown RBP23.28■■□□□ 1.32
CCDC17-201ENST00000372044 SPATA31A1Q5TZJ5 1347 aa23.27■■□□□ 1.32
CCDC17-201ENST00000372044 UBR2Q8IWV8 1755 aa23.26■■□□□ 1.31
CCDC17-201ENST00000372044 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
CCDC17-201ENST00000372044 C8orf37Q96NL8 207 aa23.26■■□□□ 1.31
CCDC17-201ENST00000372044 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
CCDC17-201ENST00000372044 RGS12O14924 1447 aa23.26■■□□□ 1.31
CCDC17-201ENST00000372044 GLI3P10071 1580 aa23.26■■□□□ 1.31
CCDC17-201ENST00000372044 HSP90AB1P08238 724 aaKnown RBP23.26■■□□□ 1.31
CCDC17-201ENST00000372044 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
CCDC17-201ENST00000372044 TMEM57Q8N5G2 664 aa23.26■■□□□ 1.31
CCDC17-201ENST00000372044 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
CCDC17-201ENST00000372044 G2E3Q7L622 706 aa23.25■■□□□ 1.31
CCDC17-201ENST00000372044 HEG1Q9ULI3 1381 aa23.25■■□□□ 1.31
CCDC17-201ENST00000372044 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
CCDC17-201ENST00000372044 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
CCDC17-201ENST00000372044 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.24■■□□□ 1.31
CCDC17-201ENST00000372044 PRAMEF22A3QJZ6 481 aa23.24■■□□□ 1.31
CCDC17-201ENST00000372044 ARHGAP45Q92619 1136 aa23.24■■□□□ 1.31
CCDC17-201ENST00000372044 SPATA31A5Q5VU36 1347 aa23.23■■□□□ 1.31
CCDC17-201ENST00000372044 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
CCDC17-201ENST00000372044 SPATA31A7Q8IWB4 1347 aa23.23■■□□□ 1.31
CCDC17-201ENST00000372044 ZNF790Q6PG37 636 aa23.22■■□□□ 1.31
CCDC17-201ENST00000372044 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
CCDC17-201ENST00000372044 ABCC4O15439 1325 aa23.22■■□□□ 1.31
CCDC17-201ENST00000372044 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
CCDC17-201ENST00000372044 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
CCDC17-201ENST00000372044 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
CCDC17-201ENST00000372044 MS4A1P11836 297 aa23.21■■□□□ 1.31
CCDC17-201ENST00000372044 CABP4P57796 275 aa23.21■■□□□ 1.31
CCDC17-201ENST00000372044 CCDC30Q5VVM6 783 aa23.21■■□□□ 1.31
CCDC17-201ENST00000372044 TNS2Q63HR2 1409 aa23.21■■□□□ 1.31
CCDC17-201ENST00000372044 EIF2S2P20042 333 aaKnown RBP23.2■■□□□ 1.3
CCDC17-201ENST00000372044 HDGFL1Q5TGJ6 251 aa23.2■■□□□ 1.3
CCDC17-201ENST00000372044 UNC5CLQ8IV45 518 aa23.2■■□□□ 1.3
CCDC17-201ENST00000372044 N4BP2Q86UW6 1770 aaPredicted RBP23.2■■□□□ 1.3
CCDC17-201ENST00000372044 LAMB4A4D0S4 1761 aa23.2■■□□□ 1.3
CCDC17-201ENST00000372044 GIGYF1O75420 1035 aaPredicted RBP23.19■■□□□ 1.3
CCDC17-201ENST00000372044 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
CCDC17-201ENST00000372044 HOXB7P09629 217 aa23.17■■□□□ 1.3
CCDC17-201ENST00000372044 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
CCDC17-201ENST00000372044 STK31Q9BXU1 1019 aa23.17■■□□□ 1.3
CCDC17-201ENST00000372044 ERVV-2B6SEH9 535 aa23.17■■□□□ 1.3
CCDC17-201ENST00000372044 FNBP4Q8N3X1 1017 aaPredicted RBP23.17■■□□□ 1.3
CCDC17-201ENST00000372044 API5Q9BZZ5 524 aaKnown RBP23.17■■□□□ 1.3
CCDC17-201ENST00000372044 THRAP3Q9Y2W1 955 aaKnown RBP23.17■■□□□ 1.3
CCDC17-201ENST00000372044 PTPRCP08575 1304 aa23.16■■□□□ 1.3
CCDC17-201ENST00000372044 KCPQ6ZWJ8 1503 aa23.16■■□□□ 1.3
CCDC17-201ENST00000372044 EXOC5O00471 708 aa23.15■■□□□ 1.3
CCDC17-201ENST00000372044 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
CCDC17-201ENST00000372044 DDX19BQ9UMR2 479 aa23.15■■□□□ 1.3
CCDC17-201ENST00000372044 PCDHB15Q9Y5E8 787 aa23.15■■□□□ 1.3
CCDC17-201ENST00000372044 KDM2BQ8NHM5 1336 aa23.15■■□□□ 1.3
CCDC17-201ENST00000372044 ANXA1P04083 346 aa23.15■■□□□ 1.3
CCDC17-201ENST00000372044 PHAXQ9H814 394 aaKnown RBP23.15■■□□□ 1.3
CCDC17-201ENST00000372044 F6X3S4 739 aa23.14■■□□□ 1.29
CCDC17-201ENST00000372044 FLIIQ13045 1269 aa23.14■■□□□ 1.29
CCDC17-201ENST00000372044 IGHDP01880 384 aa23.13■■□□□ 1.29
CCDC17-201ENST00000372044 VPS72Q15906 364 aa23.13■■□□□ 1.29
CCDC17-201ENST00000372044 BARGINQ6ZT62 677 aa23.12■■□□□ 1.29
CCDC17-201ENST00000372044 TTC5Q8N0Z6 440 aa23.12■■□□□ 1.29
CCDC17-201ENST00000372044 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
CCDC17-201ENST00000372044 ZBTB40Q9NUA8 1239 aa23.11■■□□□ 1.29
CCDC17-201ENST00000372044 USP21Q9UK80 565 aa23.11■■□□□ 1.29
CCDC17-201ENST00000372044 ZBTB7BO15156 539 aaPredicted RBP23.11■■□□□ 1.29
CCDC17-201ENST00000372044 DDB1Q16531 1140 aa23.11■■□□□ 1.29
CCDC17-201ENST00000372044 FAM98CQ17RN3 349 aaKnown RBP23.11■■□□□ 1.29
CCDC17-201ENST00000372044 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
CCDC17-201ENST00000372044 FKBP5Q13451 457 aaPredicted RBP23.09■■□□□ 1.29
CCDC17-201ENST00000372044 MEX3CQ5U5Q3 659 aaKnown RBP23.09■■□□□ 1.29
CCDC17-201ENST00000372044 INTS3Q68E01 1043 aaKnown RBP23.09■■□□□ 1.29
CCDC17-201ENST00000372044 SKAP1Q86WV1 359 aa23.09■■□□□ 1.29
CCDC17-201ENST00000372044 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
CCDC17-201ENST00000372044 PIGBQ92521 554 aa23.09■■□□□ 1.29
CCDC17-201ENST00000372044 FMNL2Q96PY5 1086 aa23.09■■□□□ 1.29
CCDC17-201ENST00000372044 TMOD3Q9NYL9 352 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms