RNA–Protein interactions for RNA: ENST00000371120.7

ATG4C-203, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-203ENST00000371120 MBIPQ9NS73 344 aa15.41■□□□□ 0.06
ATG4C-203ENST00000371120 BRWD3Q6RI45 1802 aa15.4■□□□□ 0.06
ATG4C-203ENST00000371120 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
ATG4C-203ENST00000371120 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
ATG4C-203ENST00000371120 ANKRD36CQ5JPF3 1778 aa15.4■□□□□ 0.06
ATG4C-203ENST00000371120 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
ATG4C-203ENST00000371120 RARSP54136 660 aaKnown RBP15.39■□□□□ 0.05
ATG4C-203ENST00000371120 EVA1CP58658 441 aa15.39■□□□□ 0.05
ATG4C-203ENST00000371120 BTAF1O14981 1849 aa15.39■□□□□ 0.05
ATG4C-203ENST00000371120 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
ATG4C-203ENST00000371120 RRP7AQ9Y3A4 280 aaKnown RBP15.38■□□□□ 0.05
ATG4C-203ENST00000371120 TAF1LQ8IZX4 1826 aa15.38■□□□□ 0.05
ATG4C-203ENST00000371120 CYP27B1O15528 508 aa15.38■□□□□ 0.05
ATG4C-203ENST00000371120 ARFGEF2Q9Y6D5 1785 aa15.37■□□□□ 0.05
ATG4C-203ENST00000371120 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
ATG4C-203ENST00000371120 PTPRCP08575 1304 aa15.37■□□□□ 0.05
ATG4C-203ENST00000371120 VAMP4O75379 141 aa15.37■□□□□ 0.05
ATG4C-203ENST00000371120 USHBP1Q8N6Y0 703 aa15.37■□□□□ 0.05
ATG4C-203ENST00000371120 ATP10DQ9P241 1426 aa15.36■□□□□ 0.05
ATG4C-203ENST00000371120 VSIG10Q8N0Z9 540 aa15.36■□□□□ 0.05
ATG4C-203ENST00000371120 RGL2O15211 777 aa15.36■□□□□ 0.05
ATG4C-203ENST00000371120 HMGB2P26583 209 aaKnown RBP15.35■□□□□ 0.05
ATG4C-203ENST00000371120 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
ATG4C-203ENST00000371120 LAMB2P55268 1798 aa15.35■□□□□ 0.05
ATG4C-203ENST00000371120 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
ATG4C-203ENST00000371120 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
ATG4C-203ENST00000371120 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.04
ATG4C-203ENST00000371120 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
ATG4C-203ENST00000371120 ABCC4O15439 1325 aa15.32■□□□□ 0.04
ATG4C-203ENST00000371120 MCM10Q7L590 875 aa15.32■□□□□ 0.04
ATG4C-203ENST00000371120 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
ATG4C-203ENST00000371120 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
ATG4C-203ENST00000371120 ZNF772Q68DY9 489 aaPredicted RBP15.31■□□□□ 0.04
ATG4C-203ENST00000371120 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
ATG4C-203ENST00000371120 IPO8O15397 1037 aaKnown RBP15.31■□□□□ 0.04
ATG4C-203ENST00000371120 TEFQ10587 303 aa15.31■□□□□ 0.04
ATG4C-203ENST00000371120 AFF2P51816 1311 aa15.3■□□□□ 0.04
ATG4C-203ENST00000371120 USP21Q9UK80 565 aa15.3■□□□□ 0.04
ATG4C-203ENST00000371120 COL15A1P39059 1388 aa15.29■□□□□ 0.04
ATG4C-203ENST00000371120 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
ATG4C-203ENST00000371120 EXOC5O00471 708 aa15.29■□□□□ 0.04
ATG4C-203ENST00000371120 NEFLP07196 543 aa15.29■□□□□ 0.04
ATG4C-203ENST00000371120 NEUROD2Q15784 382 aa15.29■□□□□ 0.04
ATG4C-203ENST00000371120 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
ATG4C-203ENST00000371120 TEX13AQ9BXU3 409 aaPredicted RBP15.29■□□□□ 0.04
ATG4C-203ENST00000371120 COL24A1Q17RW2 1714 aa15.28■□□□□ 0.04
ATG4C-203ENST00000371120 CCDC30Q5VVM6 783 aa15.28■□□□□ 0.04
ATG4C-203ENST00000371120 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
ATG4C-203ENST00000371120 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
ATG4C-203ENST00000371120 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
ATG4C-203ENST00000371120 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
ATG4C-203ENST00000371120 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.04
ATG4C-203ENST00000371120 ZNF790Q6PG37 636 aa15.27■□□□□ 0.03
ATG4C-203ENST00000371120 DDB1Q16531 1140 aa15.26■□□□□ 0.03
ATG4C-203ENST00000371120 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
ATG4C-203ENST00000371120 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
ATG4C-203ENST00000371120 NGLY1Q96IV0 654 aa15.26■□□□□ 0.03
ATG4C-203ENST00000371120 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
ATG4C-203ENST00000371120 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
ATG4C-203ENST00000371120 DCTN1Q14203 1278 aa15.26■□□□□ 0.03
ATG4C-203ENST00000371120 FMNL2Q96PY5 1086 aa15.26■□□□□ 0.03
ATG4C-203ENST00000371120 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
ATG4C-203ENST00000371120 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
ATG4C-203ENST00000371120 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
ATG4C-203ENST00000371120 ADAMTS2O95450 1211 aa15.25■□□□□ 0.03
ATG4C-203ENST00000371120 CABP4P57796 275 aa15.24■□□□□ 0.03
ATG4C-203ENST00000371120 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
ATG4C-203ENST00000371120 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
ATG4C-203ENST00000371120 MPRIPQ6WCQ1 1025 aa15.24■□□□□ 0.03
ATG4C-203ENST00000371120 INTS3Q68E01 1043 aaKnown RBP15.23■□□□□ 0.03
ATG4C-203ENST00000371120 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
ATG4C-203ENST00000371120 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
ATG4C-203ENST00000371120 MEX3CQ5U5Q3 659 aaKnown RBP15.22■□□□□ 0.03
ATG4C-203ENST00000371120 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
ATG4C-203ENST00000371120 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
ATG4C-203ENST00000371120 NUTM2AQ8IVF1 878 aaPredicted RBP15.22■□□□□ 0.03
ATG4C-203ENST00000371120 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
ATG4C-203ENST00000371120 C4BP0C0L5 1744 aa15.22■□□□□ 0.03
ATG4C-203ENST00000371120 C4AP0C0L4 1744 aa15.22■□□□□ 0.03
ATG4C-203ENST00000371120 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
ATG4C-203ENST00000371120 HYPKQ9NX55 129 aa15.22■□□□□ 0.03
ATG4C-203ENST00000371120 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
ATG4C-203ENST00000371120 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.03
ATG4C-203ENST00000371120 TSPYL6Q8N831 410 aa15.21■□□□□ 0.03
ATG4C-203ENST00000371120 MARCH10Q8NA82 808 aaPredicted RBP15.21■□□□□ 0.03
ATG4C-203ENST00000371120 LRP10Q7Z4F1 713 aa15.21■□□□□ 0.02
ATG4C-203ENST00000371120 TMOD3Q9NYL9 352 aa15.21■□□□□ 0.02
ATG4C-203ENST00000371120 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.02
ATG4C-203ENST00000371120 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
ATG4C-203ENST00000371120 DDX21Q9NR30 783 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATG4C-203ENST00000371120 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
ATG4C-203ENST00000371120 DZIP1LQ8IYY4 767 aaKnown RBP15.19■□□□□ 0.02
ATG4C-203ENST00000371120 STK31Q9BXU1 1019 aa15.19■□□□□ 0.02
ATG4C-203ENST00000371120 DDX19BQ9UMR2 479 aa15.19■□□□□ 0.02
ATG4C-203ENST00000371120 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
ATG4C-203ENST00000371120 NUP98P52948 1817 aa15.18■□□□□ 0.02
ATG4C-203ENST00000371120 BCAR3O75815 825 aa15.18■□□□□ 0.02
ATG4C-203ENST00000371120 CCT4P50991 539 aaKnown RBP15.18■□□□□ 0.02
ATG4C-203ENST00000371120 TRIM27P14373 513 aa15.17■□□□□ 0.02
ATG4C-203ENST00000371120 NFATC2IPQ8NCF5 419 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms