RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CCDC73Q6ZRK6 1079 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 FAM177A1Q8N128 213 aaPredicted RBP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 C9orf84Q5VXU9 1444 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 TTC36A6NLP5 189 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 PPP1R12AO14974 1030 aaPredicted RBP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 INPP5BP32019 993 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 NEK4P51957 841 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 IRX1P78414 480 aaPredicted RBP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 ELF2Q15723 593 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 CEP112Q8N8E3 955 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 IQGAP2Q13576 1575 aa12.19□□□□□ -0.46
PRDM1-201ENST00000369089 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 ZNF513Q8N8E2 541 aaPredicted RBP12.19□□□□□ -0.46
PRDM1-201ENST00000369089 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
PRDM1-201ENST00000369089 NAIPQ13075 1403 aa12.18□□□□□ -0.46
PRDM1-201ENST00000369089 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRDM1-201ENST00000369089 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
PRDM1-201ENST00000369089 EFCAB13Q8IY85 973 aa12.18□□□□□ -0.46
PRDM1-201ENST00000369089 MCM6Q14566 821 aa12.18□□□□□ -0.46
PRDM1-201ENST00000369089 WDR66Q8TBY9 1149 aa12.18□□□□□ -0.46
PRDM1-201ENST00000369089 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
PRDM1-201ENST00000369089 ZSCAN12O43309 604 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 HSPA4P34932 840 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 GOLGA6L10A0A0M3HER8 536 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 MCM3P25205 808 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 GSDMDP57764 484 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 EVC2Q86UK5 1308 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 CUL7Q14999 1698 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 H3BQV1 296 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 APAF1O14727 1248 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRDM1-201ENST00000369089 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 DAPK1P53355 1430 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
PRDM1-201ENST00000369089 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
PRDM1-201ENST00000369089 CCDC50Q8IVM0 306 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 TRIM6Q9C030 488 aaPredicted RBP12.16□□□□□ -0.46
PRDM1-201ENST00000369089 KDM4AO75164 1064 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 PDILTQ8N807 584 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
PRDM1-201ENST00000369089 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
PRDM1-201ENST00000369089 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
PRDM1-201ENST00000369089 PEX19P40855 299 aa12.15□□□□□ -0.46
PRDM1-201ENST00000369089 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
PRDM1-201ENST00000369089 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.46
PRDM1-201ENST00000369089 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
PRDM1-201ENST00000369089 BCAR3O75815 825 aa12.15□□□□□ -0.46
PRDM1-201ENST00000369089 MRFAP1L1Q96HT8 127 aa12.15□□□□□ -0.46
PRDM1-201ENST00000369089 TACO1Q9BSH4 297 aaKnown RBP12.15□□□□□ -0.46
PRDM1-201ENST00000369089 A0A087WUV0 522 aaPredicted RBP12.14□□□□□ -0.47
PRDM1-201ENST00000369089 SEC24BO95487 1268 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 PTGS1P23219 599 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
PRDM1-201ENST00000369089 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 SKILP12757 684 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 IBTKQ9P2D0 1353 aaPredicted RBP12.14□□□□□ -0.47
PRDM1-201ENST00000369089 ACTN2P35609 894 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 TMED8Q6PL24 325 aaPredicted RBP12.14□□□□□ -0.47
PRDM1-201ENST00000369089 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
PRDM1-201ENST00000369089 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
PRDM1-201ENST00000369089 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
PRDM1-201ENST00000369089 GRIN2AQ12879 1464 aa12.13□□□□□ -0.47
PRDM1-201ENST00000369089 PLB1Q6P1J6 1458 aa12.13□□□□□ -0.47
PRDM1-201ENST00000369089 SMC1AQ14683 1233 aaKnown RBP12.13□□□□□ -0.47
PRDM1-201ENST00000369089 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
PRDM1-201ENST00000369089 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
PRDM1-201ENST00000369089 CTNNA3Q9UI47 895 aa12.13□□□□□ -0.47
PRDM1-201ENST00000369089 RAD50Q92878 1312 aa12.13□□□□□ -0.47
PRDM1-201ENST00000369089 KINO60870 393 aaKnown RBP12.12□□□□□ -0.47
PRDM1-201ENST00000369089 EP400NLQ6ZTU2 488 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 B4GALNT4Q76KP1 1039 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 N4BP2L2Q92802 583 aaPredicted RBP12.12□□□□□ -0.47
PRDM1-201ENST00000369089 ANO2Q9NQ90 1003 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 ODF2LQ9ULJ1 636 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 FBXO18Q8NFZ0 1043 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 KIF4AO95239 1232 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
PRDM1-201ENST00000369089 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
PRDM1-201ENST00000369089 KIF5BP33176 963 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms