RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 BTBD11A6QL63 1104 aa30.68■■■□□ 2.5
SNX3-203ENST00000368979 PDE3AQ14432 1141 aa30.68■■■□□ 2.5
SNX3-203ENST00000368979 NKX1-1Q15270 411 aaPredicted RBP30.68■■■□□ 2.5
SNX3-203ENST00000368979 EXOC6Q8TAG9 804 aa30.68■■■□□ 2.5
SNX3-203ENST00000368979 THRAP3Q9Y2W1 955 aaKnown RBP30.68■■■□□ 2.5
SNX3-203ENST00000368979 SOS1Q07889 1333 aaPredicted RBP30.67■■■□□ 2.5
SNX3-203ENST00000368979 SPATA31A5Q5VU36 1347 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 SPATA31A7Q8IWB4 1347 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 KIF16BQ96L93 1317 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 C8orf37Q96NL8 207 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 CRBNQ96SW2 442 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 SLC52A2Q9HAB3 445 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 PPP4R2Q9NY27 417 aa30.67■■■□□ 2.5
SNX3-203ENST00000368979 UNC5CLQ8IV45 518 aa30.66■■■□□ 2.5
SNX3-203ENST00000368979 MRPL50Q8N5N7 158 aaKnown RBP30.66■■■□□ 2.5
SNX3-203ENST00000368979 FNBP4Q8N3X1 1017 aaPredicted RBP30.65■■■□□ 2.5
SNX3-203ENST00000368979 ZKSCAN2Q63HK3 967 aa30.64■■■□□ 2.5
SNX3-203ENST00000368979 NGLY1Q96IV0 654 aa30.64■■■□□ 2.5
SNX3-203ENST00000368979 EIF4A1P60842 406 aaKnown RBP30.63■■■□□ 2.49
SNX3-203ENST00000368979 CDCA7Q9BWT1 371 aaPredicted RBP30.63■■■□□ 2.49
SNX3-203ENST00000368979 TNS2Q63HR2 1409 aa30.63■■■□□ 2.49
SNX3-203ENST00000368979 TOGARAM1Q9Y4F4 1720 aa30.61■■■□□ 2.49
SNX3-203ENST00000368979 KCNQ3O43525 872 aa30.61■■■□□ 2.49
SNX3-203ENST00000368979 DDX54Q8TDD1 881 aaKnown RBP30.61■■■□□ 2.49
SNX3-203ENST00000368979 NOB1Q9ULX3 412 aaKnown RBP30.61■■■□□ 2.49
SNX3-203ENST00000368979 SOCS7O14512 581 aa30.59■■■□□ 2.49
SNX3-203ENST00000368979 BARGINQ6ZT62 677 aa30.59■■■□□ 2.49
SNX3-203ENST00000368979 TNNQ9UQP3 1299 aa30.59■■■□□ 2.49
SNX3-203ENST00000368979 HEG1Q9ULI3 1381 aa30.58■■■□□ 2.49
SNX3-203ENST00000368979 VPS72Q15906 364 aa30.58■■■□□ 2.49
SNX3-203ENST00000368979 ATF7IPQ6VMQ6 1270 aa30.58■■■□□ 2.49
SNX3-203ENST00000368979 NFATC2IPQ8NCF5 419 aa30.58■■■□□ 2.49
SNX3-203ENST00000368979 TCERG1O14776 1098 aaKnown RBP30.57■■■□□ 2.49
SNX3-203ENST00000368979 IPO8O15397 1037 aaKnown RBP30.57■■■□□ 2.49
SNX3-203ENST00000368979 HOXB7P09629 217 aa30.57■■■□□ 2.49
SNX3-203ENST00000368979 TRIM27P14373 513 aa30.57■■■□□ 2.49
SNX3-203ENST00000368979 PANK1Q8TE04 598 aa30.57■■■□□ 2.49
SNX3-203ENST00000368979 ERVV-2B6SEH9 535 aa30.57■■■□□ 2.48
SNX3-203ENST00000368979 MS4A1P11836 297 aa30.56■■■□□ 2.48
SNX3-203ENST00000368979 RLBP1P12271 317 aa30.56■■■□□ 2.48
SNX3-203ENST00000368979 CABP4P57796 275 aa30.56■■■□□ 2.48
SNX3-203ENST00000368979 ARHGAP45Q92619 1136 aa30.56■■■□□ 2.48
SNX3-203ENST00000368979 PAPPAQ13219 1627 aa30.56■■■□□ 2.48
SNX3-203ENST00000368979 EXOC5O00471 708 aa30.55■■■□□ 2.48
SNX3-203ENST00000368979 CCDC9Q9Y3X0 531 aaKnown RBP30.55■■■□□ 2.48
SNX3-203ENST00000368979 ZNF790Q6PG37 636 aa30.54■■■□□ 2.48
SNX3-203ENST00000368979 DZIP1LQ8IYY4 767 aaKnown RBP30.54■■■□□ 2.48
SNX3-203ENST00000368979 MEX3CQ5U5Q3 659 aaKnown RBP30.53■■■□□ 2.48
SNX3-203ENST00000368979 USP21Q9UK80 565 aa30.53■■■□□ 2.48
SNX3-203ENST00000368979 CCDC30Q5VVM6 783 aa30.52■■■□□ 2.48
SNX3-203ENST00000368979 CLUAP1Q96AJ1 413 aa30.52■■■□□ 2.48
SNX3-203ENST00000368979 COG6Q9Y2V7 657 aa30.51■■■□□ 2.47
SNX3-203ENST00000368979 SLC39A6Q13433 755 aa30.5■■■□□ 2.47
SNX3-203ENST00000368979 FTSJ3Q8IY81 847 aaKnown RBP30.5■■■□□ 2.47
SNX3-203ENST00000368979 GLI3P10071 1580 aa30.5■■■□□ 2.47
SNX3-203ENST00000368979 UBR2Q8IWV8 1755 aa30.5■■■□□ 2.47
SNX3-203ENST00000368979 DDB1Q16531 1140 aa30.49■■■□□ 2.47
SNX3-203ENST00000368979 C5P01031 1676 aa30.48■■■□□ 2.47
SNX3-203ENST00000368979 GIGYF1O75420 1035 aaPredicted RBP30.48■■■□□ 2.47
SNX3-203ENST00000368979 B4GALNT3Q6L9W6 998 aa30.48■■■□□ 2.47
SNX3-203ENST00000368979 SLC4A2P04920 1241 aa30.47■■■□□ 2.47
SNX3-203ENST00000368979 HDGFL1Q5TGJ6 251 aa30.47■■■□□ 2.47
SNX3-203ENST00000368979 STK31Q9BXU1 1019 aa30.47■■■□□ 2.47
SNX3-203ENST00000368979 CACNA1FO60840 1977 aa30.47■■■□□ 2.47
SNX3-203ENST00000368979 AFF2P51816 1311 aa30.47■■■□□ 2.47
SNX3-203ENST00000368979 MVPQ14764 893 aaKnown RBP30.47■■■□□ 2.47
SNX3-203ENST00000368979 CHMP4AQ9BY43 222 aa30.47■■■□□ 2.47
SNX3-203ENST00000368979 RGS12O14924 1447 aa30.46■■■□□ 2.47
SNX3-203ENST00000368979 ITGB4P16144 1822 aa30.46■■■□□ 2.47
SNX3-203ENST00000368979 PTPRCP08575 1304 aa30.46■■■□□ 2.47
SNX3-203ENST00000368979 THSD7AQ9UPZ6 1657 aa30.46■■■□□ 2.47
SNX3-203ENST00000368979 TTC5Q8N0Z6 440 aa30.46■■■□□ 2.47
SNX3-203ENST00000368979 API5Q9BZZ5 524 aaKnown RBP30.46■■■□□ 2.47
SNX3-203ENST00000368979 ABCC4O15439 1325 aa30.45■■■□□ 2.47
SNX3-203ENST00000368979 CCDC136Q96JN2 1154 aa30.45■■■□□ 2.47
SNX3-203ENST00000368979 DOT1LQ8TEK3 1739 aa30.45■■■□□ 2.46
SNX3-203ENST00000368979 KCPQ6ZWJ8 1503 aa30.43■■■□□ 2.46
SNX3-203ENST00000368979 NECTIN2Q92692 538 aa30.43■■■□□ 2.46
SNX3-203ENST00000368979 ATRNO75882 1429 aa30.43■■■□□ 2.46
SNX3-203ENST00000368979 FAM98CQ17RN3 349 aaKnown RBP30.42■■■□□ 2.46
SNX3-203ENST00000368979 TMEM57Q8N5G2 664 aa30.42■■■□□ 2.46
SNX3-203ENST00000368979 ZNF496Q96IT1 587 aaPredicted RBP30.42■■■□□ 2.46
SNX3-203ENST00000368979 TMOD3Q9NYL9 352 aa30.42■■■□□ 2.46
SNX3-203ENST00000368979 LAMB4A4D0S4 1761 aa30.41■■■□□ 2.46
SNX3-203ENST00000368979 EIF2S2P20042 333 aaKnown RBP30.41■■■□□ 2.46
SNX3-203ENST00000368979 AAMPQ13685 434 aa30.41■■■□□ 2.46
SNX3-203ENST00000368979 G2E3Q7L622 706 aa30.41■■■□□ 2.46
SNX3-203ENST00000368979 FMNL2Q96PY5 1086 aa30.41■■■□□ 2.46
SNX3-203ENST00000368979 PRAMEF22A3QJZ6 481 aa30.4■■■□□ 2.46
SNX3-203ENST00000368979 MARCH10Q8NA82 808 aaPredicted RBP30.39■■■□□ 2.46
SNX3-203ENST00000368979 BCL9O00512 1426 aa30.39■■■□□ 2.45
SNX3-203ENST00000368979 DDX19BQ9UMR2 479 aa30.38■■■□□ 2.45
SNX3-203ENST00000368979 ITPRIPQ8IWB1 547 aa30.37■■■□□ 2.45
SNX3-203ENST00000368979 FLIIQ13045 1269 aa30.37■■■□□ 2.45
SNX3-203ENST00000368979 PIGBQ92521 554 aa30.37■■■□□ 2.45
SNX3-203ENST00000368979 CHPF2Q9P2E5 772 aa30.37■■■□□ 2.45
SNX3-203ENST00000368979 SNRPA1P09661 255 aaKnown RBP30.36■■■□□ 2.45
SNX3-203ENST00000368979 GJD4Q96KN9 370 aaPredicted RBP30.36■■■□□ 2.45
SNX3-203ENST00000368979 TRPC5Q9UL62 973 aaPredicted RBP30.35■■■□□ 2.45
SNX3-203ENST00000368979 DBF4Q9UBU7 674 aaPredicted RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms