RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PRDM10Q9NQV6 1147 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 HSP90B2PQ58FF3 399 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 CCDC191Q8NCU4 936 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 DEF6Q9H4E7 631 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 E9PCH4 1651 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 ABCC3O15438 1527 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 MCM10Q7L590 875 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 CYP46A1Q9Y6A2 500 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 DCTN1Q14203 1278 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 SLC26A8Q96RN1 970 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 TATP17735 454 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 EIF4A2Q14240 407 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 KRT32Q14532 448 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 DHX8Q14562 1220 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 RAB3GAP1Q15042 981 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 TNNQ9UQP3 1299 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 FLT4P35916 1363 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 FLIIQ13045 1269 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 C8orf58Q8NAV2 365 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 PDCL3Q9H2J4 239 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 SPG7Q9UQ90 795 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 TBX22Q9Y458 520 aa6.39□□□□□ -1.39
CDC42BPA-204ENST00000366767 CEP152O94986 1710 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 BECN2A8MW95 431 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 ATP8B2P98198 1209 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 CHMP3Q9Y3E7 222 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 DMRT2Q9Y5R5 561 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 PLEKHG3A1L390 1219 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 ESPNB1AK53 854 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 SASS6Q6UVJ0 657 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 INO80Q9ULG1 1556 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 BTBD11A6QL63 1104 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 SRGAP3O43295 1099 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 RUFY1Q96T51 708 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 SEC24BO95487 1268 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 ESCO1Q5FWF5 840 aa6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 SF3A1Q15459 793 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-204ENST00000366767 ERCC6L2Q5T890 1561 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 ABCC4O15439 1325 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 BCL11BQ9C0K0 894 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 IQGAP1P46940 1657 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 BAG4O95429 457 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 USP8P40818 1118 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 TPD52L1Q16890 204 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 CEP85Q6P2H3 762 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 ZNF530Q6P9A1 599 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 MCM5P33992 734 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 ZSCAN30Q86W11 494 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 CHL1O00533 1208 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 UVSSAQ2YD98 709 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 DBF4Q9UBU7 674 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 UGGT1Q9NYU2 1555 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 ATF3P18847 181 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 ABCA6Q8N139 1617 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 ERICH4A6NGS2 130 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 PLCD4Q9BRC7 762 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 NRXN1Q9ULB1 1477 aa6.37□□□□□ -1.39
CDC42BPA-204ENST00000366767 SDSP20132 328 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 ERCC4Q92889 916 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 FSD1Q9BTV5 496 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 PHF8Q9UPP1 1060 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 PLEKHM2Q8IWE5 1019 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 EXOC6BQ9Y2D4 811 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 CDR1P51861 262 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 PDE1AP54750 535 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 DNAAF4Q8WXU2 420 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 INTS4Q96HW7 963 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 SBNO1A3KN83 1393 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 LARP1Q6PKG0 1096 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 GIMAP7Q8NHV1 300 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 HYPKQ9NX55 129 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 HOXB7P09629 217 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 KRT85P78386 507 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 CREBRFQ8IUR6 639 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 AOX1Q06278 1338 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 ARHGEF10O15013 1369 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 EVI5LQ96CN4 794 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 PHACTR3Q96KR7 559 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 PDRG1Q9NUG6 133 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 CLSTN1O94985 981 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 CLCN1P35523 988 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 ZHX1Q9UKY1 873 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 VPS37CA5D8V6 355 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 FAM83GA6ND36 823 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 TSPYL6Q8N831 410 aa6.36□□□□□ -1.39
CDC42BPA-204ENST00000366767 RTL1A6NKG5 1358 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 TPM1P09493 284 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 IRX3P78415 501 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 ESYT1Q9BSJ8 1104 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 SSFA2P28290 1259 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 TRDNQ13061 729 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 BLOC1S2Q6QNY1 142 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 MEIS3Q99687 375 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 ALDH1L1O75891 902 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 TSR1Q2NL82 804 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 GPATCH11Q8N954 259 aa6.35□□□□□ -1.39
CDC42BPA-204ENST00000366767 CBX1P83916 185 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms