RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 GPAMQ9HCL2 828 aa3.36□□□□□ -1.87
RNU6-228P-201ENST00000362700 FDX1P10109 184 aa3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 JUNBP17275 347 aaPredicted RBP3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 ALAS2P22557 587 aa3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 SLC27A3Q5K4L6 730 aa3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 INTS5Q6P9B9 1019 aaKnown RBP3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 KCTD15Q96SI1 283 aaPredicted RBP3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 MAP10Q9P2G4 905 aa3.35□□□□□ -1.87
RNU6-228P-201ENST00000362700 TGFB1P01137 390 aa3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 CSB-PGBD3P0DP91 1061 aa3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 UBAP2LQ14157 1087 aaKnown RBP3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 PGBD3Q8N328 593 aa3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 KDF1Q8NAX2 398 aaPredicted RBP3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 ARMC2Q8NEN0 867 aa3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 CARD14Q9BXL6 1004 aa3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 RAPGEFL1Q9UHV5 662 aa3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 CDV3Q9UKY7 258 aaKnown RBP3.34□□□□□ -1.87
RNU6-228P-201ENST00000362700 MEN1O00255 615 aa3.33□□□□□ -1.88
RNU6-228P-201ENST00000362700 ABI1Q8IZP0 508 aa3.33□□□□□ -1.88
RNU6-228P-201ENST00000362700 M0R082 166 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 BNIP3LO60238 219 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 COL9A3Q14050 684 aaPredicted RBP3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 INTS6LQ5JSJ4 861 aaKnown RBP3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 EFHC2Q5JST6 749 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 TRAPPC3LQ5T215 181 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 SHISA2Q6UWI4 295 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 LYPD8Q6UX82 237 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 DTX1Q86Y01 620 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 ZNF784Q8NCA9 323 aaPredicted RBP3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 ZNF417Q8TAU3 575 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 ZNF587Q96SQ5 575 aaPredicted RBP3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 PHOX2BQ99453 314 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 PRDM6Q9NQX0 595 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 WDR70Q9NW82 654 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 KLF15Q9UIH9 416 aa3.32□□□□□ -1.88
RNU6-228P-201ENST00000362700 GSC2O15499 205 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 SUV39H1O43463 412 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 FARP2O94887 1054 aaPredicted RBP3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 F12P00748 615 aaPredicted RBP3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 ERFEQ4G0M1 354 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 TTLL10Q6ZVT0 673 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 SH3BP5LQ7L8J4 393 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 TAS1R3Q7RTX0 852 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 KSR1Q8IVT5 923 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 SLC10A4Q96EP9 437 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 TMPRSS5Q9H3S3 457 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 NDFIP2Q9NV92 336 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 PCDHGC3Q9UN70 934 aa3.31□□□□□ -1.88
RNU6-228P-201ENST00000362700 ELOA3CA0A087WX78 387 aaPredicted RBP3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 SPDYE5A6NIY4 337 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 ELOA3DA6NLF2 546 aaPredicted RBP3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 SPATA31C2B4DYI2 1134 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 WASLO00401 505 aaPredicted RBP3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 ITGB5P18084 799 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 RAC1P63000 192 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 ELOA3BQ3SY89 546 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 NUTM1Q86Y26 1132 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 ELOA3Q8NG57 546 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 TMPRSS4Q9NRS4 437 aa3.3□□□□□ -1.88
RNU6-228P-201ENST00000362700 ADD1P35611 737 aaKnown RBP3.29□□□□□ -1.88
RNU6-228P-201ENST00000362700 PCBP4P57723 403 aaKnown RBP3.29□□□□□ -1.88
RNU6-228P-201ENST00000362700 SLC38A3Q99624 504 aa3.29□□□□□ -1.88
RNU6-228P-201ENST00000362700 A0A1B0GTH6 734 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 LILRA1O75019 489 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 NID1P14543 1247 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 ZSCAN18Q8TBC5 510 aaPredicted RBP3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 WFDC12Q8WWY7 111 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 TOX2Q96NM4 488 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 NLRP3Q96P20 1036 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 RUBCNLQ9H714 662 aa3.28□□□□□ -1.88
RNU6-228P-201ENST00000362700 A0A0A0MRY4 1105 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 GNPATO15228 680 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 IGLV1-40P01703 118 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 IREB2P48200 963 aaKnown RBP3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 MTMR2Q13614 643 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 CBLL1Q75N03 491 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 GRIP2Q9C0E4 1043 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 LMCD1Q9NZU5 365 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 PRR12Q9ULL5 1215 aa3.27□□□□□ -1.89
RNU6-228P-201ENST00000362700 CTSWP56202 376 aa3.26□□□□□ -1.89
RNU6-228P-201ENST00000362700 ZNF468Q5VIY5 522 aaPredicted RBP3.26□□□□□ -1.89
RNU6-228P-201ENST00000362700 FIGNL1Q6PIW4 674 aa3.26□□□□□ -1.89
RNU6-228P-201ENST00000362700 OVOL3O00110 214 aa3.25□□□□□ -1.89
RNU6-228P-201ENST00000362700 FAM182BQ5T319 152 aa3.25□□□□□ -1.89
RNU6-228P-201ENST00000362700 LCNL1Q6ZST4 164 aa3.25□□□□□ -1.89
RNU6-228P-201ENST00000362700 SIAH1Q8IUQ4 282 aa3.25□□□□□ -1.89
RNU6-228P-201ENST00000362700 MEGF10Q96KG7 1140 aa3.25□□□□□ -1.89
RNU6-228P-201ENST00000362700 A0A1W2PRU2 124 aa3.24□□□□□ -1.89
RNU6-228P-201ENST00000362700 ALBP02768 609 aa3.24□□□□□ -1.89
RNU6-228P-201ENST00000362700 NOS3P29474 1203 aa3.24□□□□□ -1.89
RNU6-228P-201ENST00000362700 RAB15P59190 212 aa3.24□□□□□ -1.89
RNU6-228P-201ENST00000362700 C8orf86Q6ZUL3 223 aa3.24□□□□□ -1.89
RNU6-228P-201ENST00000362700 ANGEL1Q9UNK9 670 aaKnown RBP3.24□□□□□ -1.89
RNU6-228P-201ENST00000362700 CD33P20138 364 aa3.23□□□□□ -1.89
RNU6-228P-201ENST00000362700 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
RNU6-228P-201ENST00000362700 PCDHGC4Q9Y5F7 938 aa3.23□□□□□ -1.89
RNU6-228P-201ENST00000362700 ZSCAN22P10073 491 aaPredicted RBP3.22□□□□□ -1.89
RNU6-228P-201ENST00000362700 CFPP27918 469 aa3.22□□□□□ -1.89
RNU6-228P-201ENST00000362700 PHKA2P46019 1235 aa3.22□□□□□ -1.89
RNU6-228P-201ENST00000362700 GPKOWQ92917 476 aaPredicted RBP eCLIP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms