RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 AIDAQ96BJ3 306 aa12.37□□□□□ -0.43
HIPK1-202ENST00000361587 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
HIPK1-202ENST00000361587 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
HIPK1-202ENST00000361587 MAP2K1Q02750 393 aaPredicted RBP12.36□□□□□ -0.43
HIPK1-202ENST00000361587 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
HIPK1-202ENST00000361587 RAI14Q9P0K7 980 aa12.36□□□□□ -0.43
HIPK1-202ENST00000361587 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
HIPK1-202ENST00000361587 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
HIPK1-202ENST00000361587 GOLGA6L10A0A0M3HER8 536 aa12.36□□□□□ -0.43
HIPK1-202ENST00000361587 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
HIPK1-202ENST00000361587 MYZAPP0CAP1 466 aa12.36□□□□□ -0.43
HIPK1-202ENST00000361587 THEMISQ8N1K5 641 aaPredicted RBP12.36□□□□□ -0.43
HIPK1-202ENST00000361587 GIMAP7Q8NHV1 300 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 SYCE3A1L190 88 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 RAB34Q9BZG1 259 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
HIPK1-202ENST00000361587 DYDC1Q8WWB3 177 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 CABP1Q9NZU7 370 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 USO1O60763 962 aaKnown RBP12.35□□□□□ -0.43
HIPK1-202ENST00000361587 MX1P20591 662 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 STAMBPO95630 424 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 GSDMDP57764 484 aa12.35□□□□□ -0.43
HIPK1-202ENST00000361587 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
HIPK1-202ENST00000361587 MATR3P43243 847 aaKnown RBP eCLIP12.34□□□□□ -0.43
HIPK1-202ENST00000361587 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
HIPK1-202ENST00000361587 GOLGA6L9A6NEM1 432 aa12.34□□□□□ -0.43
HIPK1-202ENST00000361587 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
HIPK1-202ENST00000361587 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
HIPK1-202ENST00000361587 MYL6BP14649 208 aa12.34□□□□□ -0.43
HIPK1-202ENST00000361587 MCM5P33992 734 aa12.34□□□□□ -0.43
HIPK1-202ENST00000361587 DHX29Q7Z478 1369 aaKnown RBP12.34□□□□□ -0.43
HIPK1-202ENST00000361587 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
HIPK1-202ENST00000361587 PYM1Q9BRP8 204 aaKnown RBP12.33□□□□□ -0.43
HIPK1-202ENST00000361587 DDX19AQ9NUU7 478 aaKnown RBP12.33□□□□□ -0.43
HIPK1-202ENST00000361587 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 PAFAH1B1P43034 410 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 CALCOCO1Q9P1Z2 691 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 RBM5P52756 815 aaKnown RBP eCLIP12.33□□□□□ -0.44
HIPK1-202ENST00000361587 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 CACNA2D4Q7Z3S7 1137 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
HIPK1-202ENST00000361587 NAA15Q9BXJ9 866 aaKnown RBP12.33□□□□□ -0.44
HIPK1-202ENST00000361587 YEATS4O95619 227 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 KIF4BQ2VIQ3 1234 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 HECW1Q76N89 1606 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 SSR1P43307 286 aaKnown RBP12.32□□□□□ -0.44
HIPK1-202ENST00000361587 PPP4R3AQ6IN85 833 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 TMEM266Q2M3C6 531 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 TMEM57Q8N5G2 664 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 TAOK3Q9H2K8 898 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 CAVIN2O95810 425 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 IDH1O75874 414 aaKnown RBP12.32□□□□□ -0.44
HIPK1-202ENST00000361587 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
HIPK1-202ENST00000361587 ERICH4A6NGS2 130 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 STARD3NLO95772 234 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
HIPK1-202ENST00000361587 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 IFFO1Q0D2I5 559 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
HIPK1-202ENST00000361587 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
HIPK1-202ENST00000361587 ALS2CR12Q96Q35 445 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
HIPK1-202ENST00000361587 MPNDQ8N594 471 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 ANAPC15P60006 121 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 EHMT1Q9H9B1 1298 aa12.31□□□□□ -0.44
HIPK1-202ENST00000361587 URI1O94763 535 aaPredicted RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 CAMK4Q16566 473 aa12.3□□□□□ -0.44
HIPK1-202ENST00000361587 METTL24Q5JXM2 366 aa12.3□□□□□ -0.44
HIPK1-202ENST00000361587 PRPF40BQ6NWY9 871 aaKnown RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 NSD3Q9BZ95 1437 aa12.3□□□□□ -0.44
HIPK1-202ENST00000361587 NKTRP30414 1462 aaKnown RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 CAVIN4Q5BKX8 364 aa12.3□□□□□ -0.44
HIPK1-202ENST00000361587 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
HIPK1-202ENST00000361587 CCDC150Q8NCX0 1101 aa12.3□□□□□ -0.44
HIPK1-202ENST00000361587 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
HIPK1-202ENST00000361587 USP5P45974 858 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 LIMCH1Q9UPQ0 1083 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 STX1AQ16623 288 aa12.29□□□□□ -0.44
HIPK1-202ENST00000361587 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms