RNA–Protein interactions for RNA: ENST00000357898.3

SPSB1-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPSB1, Length 1,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-202ENST00000357898 MAP3K5Q99683 1374 aa22.58■■□□□ 1.2
SPSB1-202ENST00000357898 C4BP0C0L5 1744 aa22.57■■□□□ 1.2
SPSB1-202ENST00000357898 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
SPSB1-202ENST00000357898 GPR162Q16538 588 aa22.57■■□□□ 1.2
SPSB1-202ENST00000357898 LINC00116Q8NCU8 138 aa22.57■■□□□ 1.2
SPSB1-202ENST00000357898 HMOX1P09601 288 aa22.56■■□□□ 1.2
SPSB1-202ENST00000357898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.55■■□□□ 1.2
SPSB1-202ENST00000357898 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
SPSB1-202ENST00000357898 KDRP35968 1356 aa22.54■■□□□ 1.2
SPSB1-202ENST00000357898 GNPATO15228 680 aa22.54■■□□□ 1.2
SPSB1-202ENST00000357898 ITPK1Q13572 414 aa22.54■■□□□ 1.2
SPSB1-202ENST00000357898 SSFA2P28290 1259 aa22.53■■□□□ 1.2
SPSB1-202ENST00000357898 SMIM5Q71RC9 77 aa22.53■■□□□ 1.2
SPSB1-202ENST00000357898 AKAP4Q5JQC9 854 aa22.52■■□□□ 1.2
SPSB1-202ENST00000357898 NFATC2IPQ8NCF5 419 aa22.52■■□□□ 1.2
SPSB1-202ENST00000357898 KDM6AO15550 1401 aaPredicted RBP22.52■■□□□ 1.2
SPSB1-202ENST00000357898 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
SPSB1-202ENST00000357898 COL24A1Q17RW2 1714 aa22.51■■□□□ 1.19
SPSB1-202ENST00000357898 AMIGO3Q86WK7 504 aa22.5■■□□□ 1.19
SPSB1-202ENST00000357898 U2SURPO15042 1029 aaKnown RBP22.49■■□□□ 1.19
SPSB1-202ENST00000357898 PTCD1O75127 700 aaKnown RBP22.49■■□□□ 1.19
SPSB1-202ENST00000357898 NLGN2Q8NFZ4 835 aa22.49■■□□□ 1.19
SPSB1-202ENST00000357898 UTRNP46939 3433 aa22.49■■□□□ 1.19
SPSB1-202ENST00000357898 RTCBQ9Y3I0 505 aaKnown RBP22.48■■□□□ 1.19
SPSB1-202ENST00000357898 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
SPSB1-202ENST00000357898 UBR3Q6ZT12 1888 aa22.47■■□□□ 1.19
SPSB1-202ENST00000357898 CFAP53Q96M91 514 aa22.46■■□□□ 1.19
SPSB1-202ENST00000357898 SLC4A9Q96Q91 983 aa22.46■■□□□ 1.19
SPSB1-202ENST00000357898 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.18
SPSB1-202ENST00000357898 RC3H1Q5TC82 1133 aaKnown RBP22.45■■□□□ 1.18
SPSB1-202ENST00000357898 CD2APQ9Y5K6 639 aa22.45■■□□□ 1.18
SPSB1-202ENST00000357898 LGR6Q9HBX8 967 aa22.44■■□□□ 1.18
SPSB1-202ENST00000357898 SLC52A2Q9HAB3 445 aa22.43■■□□□ 1.18
SPSB1-202ENST00000357898 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
SPSB1-202ENST00000357898 RFC4P35249 363 aa22.42■■□□□ 1.18
SPSB1-202ENST00000357898 CNTNAP4Q9C0A0 1308 aa22.42■■□□□ 1.18
SPSB1-202ENST00000357898 ADRA2BP18089 450 aa22.41■■□□□ 1.18
SPSB1-202ENST00000357898 GRIN3BO60391 1043 aa22.4■■□□□ 1.18
SPSB1-202ENST00000357898 RPS6KA4O75676 772 aa22.4■■□□□ 1.18
SPSB1-202ENST00000357898 ARHGEF1Q92888 912 aaKnown RBP22.4■■□□□ 1.18
SPSB1-202ENST00000357898 SCN11AQ9UI33 1791 aa22.4■■□□□ 1.18
SPSB1-202ENST00000357898 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
SPSB1-202ENST00000357898 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.18
SPSB1-202ENST00000357898 CRKLP46109 303 aaKnown RBP22.39■■□□□ 1.17
SPSB1-202ENST00000357898 NLGN1Q8N2Q7 840 aa22.39■■□□□ 1.17
SPSB1-202ENST00000357898 MMP10P09238 476 aa22.38■■□□□ 1.17
SPSB1-202ENST00000357898 GAS2L2Q8NHY3 880 aa22.38■■□□□ 1.17
SPSB1-202ENST00000357898 CHD4Q14839 1912 aa22.37■■□□□ 1.17
SPSB1-202ENST00000357898 SLC39A6Q13433 755 aa22.37■■□□□ 1.17
SPSB1-202ENST00000357898 COL3A1P02461 1466 aaPredicted RBP22.37■■□□□ 1.17
SPSB1-202ENST00000357898 YBX3P16989 372 aaKnown RBP eCLIP22.36■■□□□ 1.17
SPSB1-202ENST00000357898 ZNF784Q8NCA9 323 aaPredicted RBP22.36■■□□□ 1.17
SPSB1-202ENST00000357898 GOLGB1Q14789 3259 aaKnown RBP22.36■■□□□ 1.17
SPSB1-202ENST00000357898 GNAT3A8MTJ3 354 aa22.35■■□□□ 1.17
SPSB1-202ENST00000357898 PPP2R1AP30153 589 aa22.35■■□□□ 1.17
SPSB1-202ENST00000357898 COL5A3P25940 1745 aaPredicted RBP22.35■■□□□ 1.17
SPSB1-202ENST00000357898 TEFQ10587 303 aa22.34■■□□□ 1.17
SPSB1-202ENST00000357898 TTC5Q8N0Z6 440 aa22.34■■□□□ 1.17
SPSB1-202ENST00000357898 U2AF1L5P0DN76 240 aaPredicted RBP22.33■■□□□ 1.17
SPSB1-202ENST00000357898 U2AF1Q01081 240 aaKnown RBP eCLIP22.33■■□□□ 1.17
SPSB1-202ENST00000357898 DNAJC10Q8IXB1 793 aa22.33■■□□□ 1.17
SPSB1-202ENST00000357898 GYS1P13807 737 aa22.32■■□□□ 1.16
SPSB1-202ENST00000357898 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
SPSB1-202ENST00000357898 WWC3Q9ULE0 1092 aa22.32■■□□□ 1.16
SPSB1-202ENST00000357898 PARP3Q9Y6F1 533 aa22.32■■□□□ 1.16
SPSB1-202ENST00000357898 CCDC87Q9NVE4 849 aa22.31■■□□□ 1.16
SPSB1-202ENST00000357898 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
SPSB1-202ENST00000357898 MRC1P22897 1456 aa22.31■■□□□ 1.16
SPSB1-202ENST00000357898 VIRMAQ69YN4 1812 aaKnown RBP22.3■■□□□ 1.16
SPSB1-202ENST00000357898 MYH14Q7Z406 1995 aaKnown RBP22.3■■□□□ 1.16
SPSB1-202ENST00000357898 ZPR1O75312 459 aa22.29■■□□□ 1.16
SPSB1-202ENST00000357898 VSIG10Q8N0Z9 540 aa22.29■■□□□ 1.16
SPSB1-202ENST00000357898 IL17REQ8NFR9 667 aa22.29■■□□□ 1.16
SPSB1-202ENST00000357898 PHACTR3Q96KR7 559 aa22.29■■□□□ 1.16
SPSB1-202ENST00000357898 RSPH6AQ9H0K4 717 aa22.29■■□□□ 1.16
SPSB1-202ENST00000357898 SRP68Q9UHB9 627 aaKnown RBP22.29■■□□□ 1.16
SPSB1-202ENST00000357898 TJP1Q07157 1748 aa22.28■■□□□ 1.16
SPSB1-202ENST00000357898 CYP19A1P11511 503 aaPredicted RBP22.28■■□□□ 1.16
SPSB1-202ENST00000357898 USP42Q9H9J4 1324 aaKnown RBP22.26■■□□□ 1.15
SPSB1-202ENST00000357898 CICQ96RK0 1608 aaPredicted RBP22.26■■□□□ 1.15
SPSB1-202ENST00000357898 FCHSD2O94868 740 aa22.26■■□□□ 1.15
SPSB1-202ENST00000357898 STARD3NLO95772 234 aa22.26■■□□□ 1.15
SPSB1-202ENST00000357898 TGFB2P61812 414 aa22.26■■□□□ 1.15
SPSB1-202ENST00000357898 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
SPSB1-202ENST00000357898 FKBP8Q14318 412 aa22.25■■□□□ 1.15
SPSB1-202ENST00000357898 ADAMTS7Q9UKP4 1686 aa22.25■■□□□ 1.15
SPSB1-202ENST00000357898 NEFMP07197 916 aa22.24■■□□□ 1.15
SPSB1-202ENST00000357898 ZNF790Q6PG37 636 aa22.24■■□□□ 1.15
SPSB1-202ENST00000357898 KCPQ6ZWJ8 1503 aa22.24■■□□□ 1.15
SPSB1-202ENST00000357898 SOS1Q07889 1333 aaPredicted RBP22.24■■□□□ 1.15
SPSB1-202ENST00000357898 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
SPSB1-202ENST00000357898 USPL1Q5W0Q7 1092 aa22.23■■□□□ 1.15
SPSB1-202ENST00000357898 C4AP0C0L4 1744 aa22.23■■□□□ 1.15
SPSB1-202ENST00000357898 A0A0G2JLW4 131 aa22.23■■□□□ 1.15
SPSB1-202ENST00000357898 BTBD11A6QL63 1104 aa22.23■■□□□ 1.15
SPSB1-202ENST00000357898 TEX13AQ9BXU3 409 aaPredicted RBP22.23■■□□□ 1.15
SPSB1-202ENST00000357898 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
SPSB1-202ENST00000357898 ZNF496Q96IT1 587 aaPredicted RBP22.22■■□□□ 1.15
SPSB1-202ENST00000357898 FMNL2Q96PY5 1086 aa22.22■■□□□ 1.15
SPSB1-202ENST00000357898 COL15A1P39059 1388 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms