RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 RGPD2P0DJD1 1756 aa13.99□□□□□ -0.17
LINC01560-201ENST00000357412 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
LINC01560-201ENST00000357412 LY75O60449 1722 aa13.98□□□□□ -0.17
LINC01560-201ENST00000357412 KDRP35968 1356 aa13.97□□□□□ -0.17
LINC01560-201ENST00000357412 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
LINC01560-201ENST00000357412 MTHFSP49914 203 aa13.96□□□□□ -0.17
LINC01560-201ENST00000357412 CABP4P57796 275 aa13.96□□□□□ -0.17
LINC01560-201ENST00000357412 C1QTNF8P60827 252 aa13.96□□□□□ -0.17
LINC01560-201ENST00000357412 KDM6AO15550 1401 aaPredicted RBP13.96□□□□□ -0.18
LINC01560-201ENST00000357412 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
LINC01560-201ENST00000357412 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
LINC01560-201ENST00000357412 RC3H1Q5TC82 1133 aaKnown RBP13.95□□□□□ -0.18
LINC01560-201ENST00000357412 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
LINC01560-201ENST00000357412 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
LINC01560-201ENST00000357412 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
LINC01560-201ENST00000357412 MMP10P09238 476 aa13.94□□□□□ -0.18
LINC01560-201ENST00000357412 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
LINC01560-201ENST00000357412 PKD1L3Q7Z443 1732 aa13.94□□□□□ -0.18
LINC01560-201ENST00000357412 ARHGEF1Q92888 912 aaKnown RBP13.94□□□□□ -0.18
LINC01560-201ENST00000357412 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
LINC01560-201ENST00000357412 KAT6BQ8WYB5 2073 aa13.94□□□□□ -0.18
LINC01560-201ENST00000357412 CNTNAP4Q9C0A0 1308 aa13.93□□□□□ -0.18
LINC01560-201ENST00000357412 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
LINC01560-201ENST00000357412 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
LINC01560-201ENST00000357412 NFATC2IPQ8NCF5 419 aa13.93□□□□□ -0.18
LINC01560-201ENST00000357412 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
LINC01560-201ENST00000357412 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
LINC01560-201ENST00000357412 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
LINC01560-201ENST00000357412 NLGN1Q8N2Q7 840 aa13.92□□□□□ -0.18
LINC01560-201ENST00000357412 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
LINC01560-201ENST00000357412 C4BP0C0L5 1744 aa13.92□□□□□ -0.18
LINC01560-201ENST00000357412 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
LINC01560-201ENST00000357412 GYS1P13807 737 aa13.91□□□□□ -0.18
LINC01560-201ENST00000357412 AKAP4Q5JQC9 854 aa13.9□□□□□ -0.18
LINC01560-201ENST00000357412 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
LINC01560-201ENST00000357412 HMOX1P09601 288 aa13.89□□□□□ -0.19
LINC01560-201ENST00000357412 RFC4P35249 363 aa13.89□□□□□ -0.19
LINC01560-201ENST00000357412 CRKLP46109 303 aaKnown RBP13.89□□□□□ -0.19
LINC01560-201ENST00000357412 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
LINC01560-201ENST00000357412 C5P01031 1676 aa13.88□□□□□ -0.19
LINC01560-201ENST00000357412 TUBGCP6Q96RT7 1819 aa13.88□□□□□ -0.19
LINC01560-201ENST00000357412 TGFB2P61812 414 aa13.88□□□□□ -0.19
LINC01560-201ENST00000357412 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
LINC01560-201ENST00000357412 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
LINC01560-201ENST00000357412 ATP10DQ9P241 1426 aa13.88□□□□□ -0.19
LINC01560-201ENST00000357412 ADCY9O60503 1353 aa13.87□□□□□ -0.19
LINC01560-201ENST00000357412 RNMTO43148 476 aaKnown RBP13.87□□□□□ -0.19
LINC01560-201ENST00000357412 MTHFSDQ2M296 383 aaKnown RBP13.87□□□□□ -0.19
LINC01560-201ENST00000357412 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
LINC01560-201ENST00000357412 MAP2P11137 1827 aaKnown RBP13.86□□□□□ -0.19
LINC01560-201ENST00000357412 A0A0G2JLW4 131 aa13.86□□□□□ -0.19
LINC01560-201ENST00000357412 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
LINC01560-201ENST00000357412 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
LINC01560-201ENST00000357412 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
LINC01560-201ENST00000357412 PXDNLA1KZ92 1463 aa13.86□□□□□ -0.19
LINC01560-201ENST00000357412 DPEP1P16444 411 aa13.85□□□□□ -0.19
LINC01560-201ENST00000357412 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
LINC01560-201ENST00000357412 FKBP8Q14318 412 aa13.85□□□□□ -0.19
LINC01560-201ENST00000357412 CCDC87Q9NVE4 849 aa13.85□□□□□ -0.19
LINC01560-201ENST00000357412 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
LINC01560-201ENST00000357412 C10orf71Q711Q0 1435 aa13.84□□□□□ -0.19
LINC01560-201ENST00000357412 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
LINC01560-201ENST00000357412 PARP3Q9Y6F1 533 aa13.84□□□□□ -0.19
LINC01560-201ENST00000357412 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.19
LINC01560-201ENST00000357412 CYP19A1P11511 503 aaPredicted RBP13.83□□□□□ -0.2
LINC01560-201ENST00000357412 KCNA3P22001 575 aa13.83□□□□□ -0.2
LINC01560-201ENST00000357412 DDR1Q08345 913 aa13.83□□□□□ -0.2
LINC01560-201ENST00000357412 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
LINC01560-201ENST00000357412 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
LINC01560-201ENST00000357412 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
LINC01560-201ENST00000357412 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
LINC01560-201ENST00000357412 TM4SF1P30408 202 aa13.81□□□□□ -0.2
LINC01560-201ENST00000357412 CNGB1Q14028 1251 aaPredicted RBP13.81□□□□□ -0.2
LINC01560-201ENST00000357412 ITGB4P16144 1822 aa13.8□□□□□ -0.2
LINC01560-201ENST00000357412 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
LINC01560-201ENST00000357412 FCHSD2O94868 740 aa13.8□□□□□ -0.2
LINC01560-201ENST00000357412 USPL1Q5W0Q7 1092 aa13.8□□□□□ -0.2
LINC01560-201ENST00000357412 VSIG10Q8N0Z9 540 aa13.8□□□□□ -0.2
LINC01560-201ENST00000357412 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
LINC01560-201ENST00000357412 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
LINC01560-201ENST00000357412 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
LINC01560-201ENST00000357412 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
LINC01560-201ENST00000357412 ZPR1O75312 459 aa13.79□□□□□ -0.2
LINC01560-201ENST00000357412 IL17REQ8NFR9 667 aa13.79□□□□□ -0.2
LINC01560-201ENST00000357412 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
LINC01560-201ENST00000357412 KIF3CO14782 793 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 ARHGAP27Q6ZUM4 889 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 MRC1P22897 1456 aa13.78□□□□□ -0.2
LINC01560-201ENST00000357412 COL3A1P02461 1466 aaPredicted RBP13.77□□□□□ -0.21
LINC01560-201ENST00000357412 CHRNA5P30532 468 aa13.77□□□□□ -0.21
LINC01560-201ENST00000357412 NFIXQ14938 502 aa13.77□□□□□ -0.21
LINC01560-201ENST00000357412 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
LINC01560-201ENST00000357412 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
LINC01560-201ENST00000357412 ZNF496Q96IT1 587 aaPredicted RBP13.76□□□□□ -0.21
LINC01560-201ENST00000357412 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
LINC01560-201ENST00000357412 COL15A1P39059 1388 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms