RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
CDK16-202ENST00000357227 GUCY2CP25092 1073 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDK16-202ENST00000357227 TTC22Q5TAA0 569 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 MORC1Q86VD1 984 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 FUCA2Q9BTY2 467 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 SRCIN1Q9C0H9 1055 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 POLR3AO14802 1390 aaPredicted RBP18.85■□□□□ 0.61
CDK16-202ENST00000357227 PNMA6AP0CW24 399 aaPredicted RBP18.85■□□□□ 0.61
CDK16-202ENST00000357227 DTNBO60941 627 aa18.85■□□□□ 0.61
CDK16-202ENST00000357227 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
CDK16-202ENST00000357227 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
CDK16-202ENST00000357227 CLCN6P51797 869 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
CDK16-202ENST00000357227 E2F4Q16254 413 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 TRIM5Q9C035 493 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 JRKLQ9Y4A0 524 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 PTPRCP08575 1304 aa18.84■□□□□ 0.61
CDK16-202ENST00000357227 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.61
CDK16-202ENST00000357227 LRRN4CLQ8ND94 238 aa18.83■□□□□ 0.61
CDK16-202ENST00000357227 SDSP20132 328 aa18.83■□□□□ 0.6
CDK16-202ENST00000357227 PTPN14Q15678 1187 aa18.83■□□□□ 0.6
CDK16-202ENST00000357227 LAMC1P11047 1609 aa18.83■□□□□ 0.6
CDK16-202ENST00000357227 RRP15Q9Y3B9 282 aaKnown RBP18.83■□□□□ 0.6
CDK16-202ENST00000357227 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
CDK16-202ENST00000357227 SLU7O95391 586 aaKnown RBP18.82■□□□□ 0.6
CDK16-202ENST00000357227 ARID5BQ14865 1188 aa18.82■□□□□ 0.6
CDK16-202ENST00000357227 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
CDK16-202ENST00000357227 CASC1Q6TDU7 716 aa18.82■□□□□ 0.6
CDK16-202ENST00000357227 KANK1Q14678 1352 aa18.81■□□□□ 0.6
CDK16-202ENST00000357227 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDK16-202ENST00000357227 UBE2HP62256 183 aa18.81■□□□□ 0.6
CDK16-202ENST00000357227 WDR33Q9C0J8 1336 aaKnown RBP18.81■□□□□ 0.6
CDK16-202ENST00000357227 ZBTB7BO15156 539 aaPredicted RBP18.8■□□□□ 0.6
CDK16-202ENST00000357227 CCDC144BQ3MJ40 725 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 SLFNL1Q499Z3 407 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 SRLQ86TD4 932 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 UPF3BQ9BZI7 483 aaKnown RBP18.8■□□□□ 0.6
CDK16-202ENST00000357227 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 TRAK1Q9UPV9 953 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 MTHFSP49914 203 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 CAMK4Q16566 473 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 PACS2Q86VP3 889 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 GOLGA6L1Q8N7Z2 621 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
CDK16-202ENST00000357227 CCDC192P0DO97 292 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
CDK16-202ENST00000357227 CEP83Q9Y592 693 aa18.8■□□□□ 0.6
CDK16-202ENST00000357227 ARHGEF5Q12774 1597 aa18.79■□□□□ 0.6
CDK16-202ENST00000357227 TPM4P67936 248 aa18.79■□□□□ 0.6
CDK16-202ENST00000357227 TSGA10IPQ3SY00 556 aa18.79■□□□□ 0.6
CDK16-202ENST00000357227 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
CDK16-202ENST00000357227 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
CDK16-202ENST00000357227 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
CDK16-202ENST00000357227 H2AFXP16104 143 aaPredicted RBP18.78■□□□□ 0.6
CDK16-202ENST00000357227 SEC31AO94979 1220 aaKnown RBP18.78■□□□□ 0.6
CDK16-202ENST00000357227 CUL4AQ13619 759 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 BRMS1Q9HCU9 246 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 CLIP2Q9UDT6 1046 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 PALD1Q9ULE6 856 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 NOS1P29475 1434 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 CCDC172P0C7W6 258 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 GORABQ5T7V8 394 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
CDK16-202ENST00000357227 CWC15Q9P013 229 aaKnown RBP18.78■□□□□ 0.6
CDK16-202ENST00000357227 MYOM1P52179 1685 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 ARHGAP29Q52LW3 1261 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 TRAPPC8Q9Y2L5 1435 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 SHPRHQ149N8 1683 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 CDC42BPBQ9Y5S2 1711 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 A0A1B0GUL7 405 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 CKAP2LQ8IYA6 745 aa18.77■□□□□ 0.6
CDK16-202ENST00000357227 OAS2P29728 719 aaKnown RBP18.76■□□□□ 0.59
CDK16-202ENST00000357227 LMAN1P49257 510 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 ZNF75DP51815 510 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 GPS2Q13227 327 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 ADGRF5Q8IZF2 1346 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 ERC2O15083 957 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 SAFB2Q14151 953 aaKnown RBP eCLIP18.76■□□□□ 0.59
CDK16-202ENST00000357227 DNAJC21Q5F1R6 531 aaKnown RBP18.76■□□□□ 0.59
CDK16-202ENST00000357227 CCDC34Q96HJ3 373 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 MYO5CQ9NQX4 1742 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 EIF2AK4Q9P2K8 1649 aaKnown RBP18.76■□□□□ 0.59
CDK16-202ENST00000357227 ANKRD65E5RJM6 399 aa18.76■□□□□ 0.59
CDK16-202ENST00000357227 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
CDK16-202ENST00000357227 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
CDK16-202ENST00000357227 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 TMCO3Q6UWJ1 677 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 DEF6Q9H4E7 631 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 TMEM87AQ8NBN3 555 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 FAM212AQ96EL1 285 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 CARD10Q9BWT7 1032 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 CBX8Q9HC52 389 aa18.74■□□□□ 0.59
CDK16-202ENST00000357227 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms