RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
NUDCD3-202ENST00000355451 GOLGA6L9A6NEM1 432 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 FIBPO43427 364 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 GNAI1P63096 354 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 RAD54L2Q9Y4B4 1467 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 TNMDQ9H2S6 317 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 SHTN1A0MZ66 631 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 MINDY4BA8MYZ0 360 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 GAS8O95995 478 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 IQCGQ9H095 443 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 ATF7IPQ6VMQ6 1270 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 CCDC144CPQ8IYA2 1237 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
NUDCD3-202ENST00000355451 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.27
NUDCD3-202ENST00000355451 KCNA4P22459 653 aa13.33□□□□□ -0.27
NUDCD3-202ENST00000355451 CCDC63Q8NA47 563 aa13.33□□□□□ -0.28
NUDCD3-202ENST00000355451 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
NUDCD3-202ENST00000355451 ZBTB16Q05516 673 aa13.33□□□□□ -0.28
NUDCD3-202ENST00000355451 CCT6BQ92526 530 aa13.33□□□□□ -0.28
NUDCD3-202ENST00000355451 NOL3O60936 208 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-202ENST00000355451 ZNF622Q969S3 477 aaKnown RBP eCLIP13.33□□□□□ -0.284e-11■□□□□ 11.1
NUDCD3-202ENST00000355451 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
NUDCD3-202ENST00000355451 PHACTR2O75167 634 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 EPSTI1Q96J88 318 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 STARD3NLO95772 234 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 CRCPO75575 148 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 MTHFSP49914 203 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 RPUSD2Q8IZ73 545 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 STX6O43752 255 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 NOD1Q9Y239 953 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 TCERG1LQ5VWI1 586 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 PANK3Q9H999 370 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 GEN1Q17RS7 908 aa13.32□□□□□ -0.28
NUDCD3-202ENST00000355451 TIMELESSQ9UNS1 1208 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 CCDC85AQ96PX6 553 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 CCER2I3L3R5 266 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 ATP2C2O75185 946 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 FAM69CQ0P6D2 419 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 MAP9Q49MG5 647 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 MTERF4Q7Z6M4 381 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 C6orf229H3BNL8 230 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 GSDMBQ8TAX9 411 aa13.31□□□□□ -0.28
NUDCD3-202ENST00000355451 TDRD12Q587J7 1177 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 GABPAQ06546 454 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 CABP5Q9NP86 173 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 CCDC6Q16204 474 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 GNAI3P08754 354 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 PAIP2Q9BPZ3 127 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 DYNC1I1O14576 645 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 MPHOSPH9Q99550 1183 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 TXNDC16Q9P2K2 825 aa13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
NUDCD3-202ENST00000355451 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 EEA1Q15075 1411 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 KLHL10Q6JEL2 608 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 CAVIN1Q6NZI2 390 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 NACA2Q9H009 215 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 ANKFY1Q9P2R3 1169 aa13.29□□□□□ -0.28
NUDCD3-202ENST00000355451 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 MAP4K4O95819 1239 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 NCAPGQ9BPX3 1015 aa13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 CDC45O75419 566 aa13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 DDX46Q7L014 1031 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-202ENST00000355451 ADAMTS2O95450 1211 aa13.27□□□□□ -0.28
NUDCD3-202ENST00000355451 NEK4P51957 841 aa13.27□□□□□ -0.28
NUDCD3-202ENST00000355451 DDX12PQ92771 950 aa13.27□□□□□ -0.28
NUDCD3-202ENST00000355451 GTF3C6Q969F1 213 aa13.27□□□□□ -0.28
NUDCD3-202ENST00000355451 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.28
NUDCD3-202ENST00000355451 B4DLN1 442 aa13.27□□□□□ -0.29
NUDCD3-202ENST00000355451 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-202ENST00000355451 PDE4AP27815 886 aa13.27□□□□□ -0.29
NUDCD3-202ENST00000355451 SMTNL1A8MU46 457 aa13.27□□□□□ -0.29
NUDCD3-202ENST00000355451 SPECC1LQ69YQ0 1117 aa13.27□□□□□ -0.29
NUDCD3-202ENST00000355451 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-202ENST00000355451 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms