RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ELL2O00472 640 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-202ENST00000355301 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
NPHP1-202ENST00000355301 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
NPHP1-202ENST00000355301 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
NPHP1-202ENST00000355301 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
NPHP1-202ENST00000355301 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-202ENST00000355301 VPS72Q15906 364 aa12.35□□□□□ -0.43
NPHP1-202ENST00000355301 BARGINQ6ZT62 677 aa12.35□□□□□ -0.43
NPHP1-202ENST00000355301 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
NPHP1-202ENST00000355301 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
NPHP1-202ENST00000355301 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
NPHP1-202ENST00000355301 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
NPHP1-202ENST00000355301 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
NPHP1-202ENST00000355301 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
NPHP1-202ENST00000355301 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
NPHP1-202ENST00000355301 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
NPHP1-202ENST00000355301 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
NPHP1-202ENST00000355301 EXOC5O00471 708 aa12.33□□□□□ -0.44
NPHP1-202ENST00000355301 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
NPHP1-202ENST00000355301 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
NPHP1-202ENST00000355301 USP21Q9UK80 565 aa12.33□□□□□ -0.44
NPHP1-202ENST00000355301 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
NPHP1-202ENST00000355301 HOXB7P09629 217 aa12.32□□□□□ -0.44
NPHP1-202ENST00000355301 MEX3CQ5U5Q3 659 aaKnown RBP12.32□□□□□ -0.44
NPHP1-202ENST00000355301 ZKSCAN2Q63HK3 967 aa12.32□□□□□ -0.44
NPHP1-202ENST00000355301 CCDC9Q9Y3X0 531 aaKnown RBP12.32□□□□□ -0.44
NPHP1-202ENST00000355301 KCNQ3O43525 872 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 CABP4P57796 275 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 IPO8O15397 1037 aaKnown RBP12.31□□□□□ -0.44
NPHP1-202ENST00000355301 DDB1Q16531 1140 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
NPHP1-202ENST00000355301 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
NPHP1-202ENST00000355301 MS4A1P11836 297 aa12.3□□□□□ -0.44
NPHP1-202ENST00000355301 TRIM27P14373 513 aa12.3□□□□□ -0.44
NPHP1-202ENST00000355301 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
NPHP1-202ENST00000355301 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
NPHP1-202ENST00000355301 AFF2P51816 1311 aa12.29□□□□□ -0.44
NPHP1-202ENST00000355301 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
NPHP1-202ENST00000355301 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
NPHP1-202ENST00000355301 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
NPHP1-202ENST00000355301 PANK1Q8TE04 598 aa12.29□□□□□ -0.44
NPHP1-202ENST00000355301 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
NPHP1-202ENST00000355301 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
NPHP1-202ENST00000355301 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
NPHP1-202ENST00000355301 RLBP1P12271 317 aa12.28□□□□□ -0.44
NPHP1-202ENST00000355301 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
NPHP1-202ENST00000355301 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
NPHP1-202ENST00000355301 DZIP1LQ8IYY4 767 aaKnown RBP12.28□□□□□ -0.44
NPHP1-202ENST00000355301 ATRNO75882 1429 aa12.27□□□□□ -0.44
NPHP1-202ENST00000355301 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.44
NPHP1-202ENST00000355301 STK31Q9BXU1 1019 aa12.27□□□□□ -0.44
NPHP1-202ENST00000355301 TNNQ9UQP3 1299 aa12.27□□□□□ -0.44
NPHP1-202ENST00000355301 THSD7AQ9UPZ6 1657 aa12.27□□□□□ -0.44
NPHP1-202ENST00000355301 UBR2Q8IWV8 1755 aa12.27□□□□□ -0.45
NPHP1-202ENST00000355301 GLI3P10071 1580 aa12.27□□□□□ -0.45
NPHP1-202ENST00000355301 ITGB4P16144 1822 aa12.27□□□□□ -0.45
NPHP1-202ENST00000355301 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
NPHP1-202ENST00000355301 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
NPHP1-202ENST00000355301 FTSJ3Q8IY81 847 aaKnown RBP12.27□□□□□ -0.45
NPHP1-202ENST00000355301 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
NPHP1-202ENST00000355301 PTPRCP08575 1304 aa12.26□□□□□ -0.45
NPHP1-202ENST00000355301 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
NPHP1-202ENST00000355301 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
NPHP1-202ENST00000355301 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
NPHP1-202ENST00000355301 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
NPHP1-202ENST00000355301 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
NPHP1-202ENST00000355301 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
NPHP1-202ENST00000355301 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
NPHP1-202ENST00000355301 COG6Q9Y2V7 657 aa12.25□□□□□ -0.45
NPHP1-202ENST00000355301 BCL9O00512 1426 aa12.25□□□□□ -0.45
NPHP1-202ENST00000355301 MVPQ14764 893 aaKnown RBP12.25□□□□□ -0.45
NPHP1-202ENST00000355301 C5P01031 1676 aa12.25□□□□□ -0.45
NPHP1-202ENST00000355301 DOT1LQ8TEK3 1739 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 KCPQ6ZWJ8 1503 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 ABCC4O15439 1325 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
NPHP1-202ENST00000355301 SNRPA1P09661 255 aaKnown RBP12.24□□□□□ -0.45
NPHP1-202ENST00000355301 EIF2S2P20042 333 aaKnown RBP12.24□□□□□ -0.45
NPHP1-202ENST00000355301 AAMPQ13685 434 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 PIGBQ92521 554 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 RGS12O14924 1447 aa12.24□□□□□ -0.45
NPHP1-202ENST00000355301 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
NPHP1-202ENST00000355301 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
NPHP1-202ENST00000355301 G2E3Q7L622 706 aa12.23□□□□□ -0.45
NPHP1-202ENST00000355301 TMEM57Q8N5G2 664 aa12.23□□□□□ -0.45
NPHP1-202ENST00000355301 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
NPHP1-202ENST00000355301 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
NPHP1-202ENST00000355301 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
NPHP1-202ENST00000355301 LAMB4A4D0S4 1761 aa12.22□□□□□ -0.45
NPHP1-202ENST00000355301 FLIIQ13045 1269 aa12.22□□□□□ -0.45
NPHP1-202ENST00000355301 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
NPHP1-202ENST00000355301 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
NPHP1-202ENST00000355301 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
NPHP1-202ENST00000355301 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
NPHP1-202ENST00000355301 ITPRIPQ8IWB1 547 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms