RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CDCA7Q9BWT1 371 aaPredicted RBP20.06■□□□□ 0.8
CTSA-202ENST00000354880 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
CTSA-202ENST00000354880 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
CTSA-202ENST00000354880 KDM3BQ7LBC6 1761 aa20.05■□□□□ 0.8
CTSA-202ENST00000354880 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
CTSA-202ENST00000354880 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
CTSA-202ENST00000354880 FRAT1Q92837 279 aaPredicted RBP20.04■□□□□ 0.8
CTSA-202ENST00000354880 MRC1P22897 1456 aa20.04■□□□□ 0.8
CTSA-202ENST00000354880 VPS72Q15906 364 aa20.04■□□□□ 0.8
CTSA-202ENST00000354880 EXOC5O00471 708 aa20.03■□□□□ 0.8
CTSA-202ENST00000354880 USP21Q9UK80 565 aa20.03■□□□□ 0.8
CTSA-202ENST00000354880 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.03■□□□□ 0.8
CTSA-202ENST00000354880 C20orf194Q5TEA3 1177 aa20.02■□□□□ 0.8
CTSA-202ENST00000354880 BARGINQ6ZT62 677 aa20.02■□□□□ 0.8
CTSA-202ENST00000354880 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.8
CTSA-202ENST00000354880 BRPF1P55201 1214 aaPredicted RBP20.02■□□□□ 0.79
CTSA-202ENST00000354880 TNS2Q63HR2 1409 aa20.02■□□□□ 0.79
CTSA-202ENST00000354880 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
CTSA-202ENST00000354880 EIF4A1P60842 406 aaKnown RBP20.01■□□□□ 0.79
CTSA-202ENST00000354880 KIF16BQ96L93 1317 aa20.01■□□□□ 0.79
CTSA-202ENST00000354880 ERVV-2B6SEH9 535 aa20■□□□□ 0.79
CTSA-202ENST00000354880 KCNQ3O43525 872 aa20■□□□□ 0.79
CTSA-202ENST00000354880 CABP4P57796 275 aa20■□□□□ 0.79
CTSA-202ENST00000354880 PDE3AQ14432 1141 aa20■□□□□ 0.79
CTSA-202ENST00000354880 MRPL50Q8N5N7 158 aaKnown RBP19.99■□□□□ 0.79
CTSA-202ENST00000354880 DDB1Q16531 1140 aa19.99■□□□□ 0.79
CTSA-202ENST00000354880 ZKSCAN2Q63HK3 967 aa19.99■□□□□ 0.79
CTSA-202ENST00000354880 AFF2P51816 1311 aa19.99■□□□□ 0.79
CTSA-202ENST00000354880 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
CTSA-202ENST00000354880 EXOC6Q8TAG9 804 aa19.98■□□□□ 0.79
CTSA-202ENST00000354880 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
CTSA-202ENST00000354880 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
CTSA-202ENST00000354880 CRBNQ96SW2 442 aa19.97■□□□□ 0.79
CTSA-202ENST00000354880 IPO8O15397 1037 aaKnown RBP19.97■□□□□ 0.79
CTSA-202ENST00000354880 HOXB7P09629 217 aa19.97■□□□□ 0.79
CTSA-202ENST00000354880 SLC39A6Q13433 755 aa19.96■□□□□ 0.79
CTSA-202ENST00000354880 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
CTSA-202ENST00000354880 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
CTSA-202ENST00000354880 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
CTSA-202ENST00000354880 MS4A1P11836 297 aa19.95■□□□□ 0.78
CTSA-202ENST00000354880 TOGARAM1Q9Y4F4 1720 aa19.95■□□□□ 0.78
CTSA-202ENST00000354880 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
CTSA-202ENST00000354880 TRIM27P14373 513 aa19.95■□□□□ 0.78
CTSA-202ENST00000354880 CCDC30Q5VVM6 783 aa19.95■□□□□ 0.78
CTSA-202ENST00000354880 TTC5Q8N0Z6 440 aa19.94■□□□□ 0.78
CTSA-202ENST00000354880 PANK1Q8TE04 598 aa19.94■□□□□ 0.78
CTSA-202ENST00000354880 CHMP4AQ9BY43 222 aa19.94■□□□□ 0.78
CTSA-202ENST00000354880 FTSJ3Q8IY81 847 aaKnown RBP19.93■□□□□ 0.78
CTSA-202ENST00000354880 ARHGAP45Q92619 1136 aa19.93■□□□□ 0.78
CTSA-202ENST00000354880 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
CTSA-202ENST00000354880 STK31Q9BXU1 1019 aa19.93■□□□□ 0.78
CTSA-202ENST00000354880 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
CTSA-202ENST00000354880 GIGYF1O75420 1035 aaPredicted RBP19.92■□□□□ 0.78
CTSA-202ENST00000354880 SLC4A2P04920 1241 aa19.92■□□□□ 0.78
CTSA-202ENST00000354880 HDGFL1Q5TGJ6 251 aa19.92■□□□□ 0.78
CTSA-202ENST00000354880 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
CTSA-202ENST00000354880 RLBP1P12271 317 aa19.92■□□□□ 0.78
CTSA-202ENST00000354880 GJD4Q96KN9 370 aaPredicted RBP19.92■□□□□ 0.78
CTSA-202ENST00000354880 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
CTSA-202ENST00000354880 TRPC5Q9UL62 973 aaPredicted RBP19.92■□□□□ 0.78
CTSA-202ENST00000354880 CACNA1FO60840 1977 aa19.91■□□□□ 0.78
CTSA-202ENST00000354880 ATRNO75882 1429 aa19.91■□□□□ 0.78
CTSA-202ENST00000354880 NECTIN2Q92692 538 aa19.9■□□□□ 0.78
CTSA-202ENST00000354880 COG6Q9Y2V7 657 aa19.9■□□□□ 0.78
CTSA-202ENST00000354880 KAT6BQ8WYB5 2073 aa19.9■□□□□ 0.78
CTSA-202ENST00000354880 EIF2S2P20042 333 aaKnown RBP19.9■□□□□ 0.78
CTSA-202ENST00000354880 MARCH10Q8NA82 808 aaPredicted RBP19.9■□□□□ 0.78
CTSA-202ENST00000354880 ZNF496Q96IT1 587 aaPredicted RBP19.9■□□□□ 0.78
CTSA-202ENST00000354880 FMNL2Q96PY5 1086 aa19.9■□□□□ 0.78
CTSA-202ENST00000354880 GLI3P10071 1580 aa19.9■□□□□ 0.78
CTSA-202ENST00000354880 ITGB4P16144 1822 aa19.89■□□□□ 0.78
CTSA-202ENST00000354880 PTPRCP08575 1304 aa19.89■□□□□ 0.77
CTSA-202ENST00000354880 A0A0G2JS52 829 aa19.88■□□□□ 0.77
CTSA-202ENST00000354880 MYT1Q01538 1121 aa19.88■□□□□ 0.77
CTSA-202ENST00000354880 API5Q9BZZ5 524 aaKnown RBP19.88■□□□□ 0.77
CTSA-202ENST00000354880 PAPPAQ13219 1627 aa19.88■□□□□ 0.77
CTSA-202ENST00000354880 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
CTSA-202ENST00000354880 PRAMEF22A3QJZ6 481 aa19.87■□□□□ 0.77
CTSA-202ENST00000354880 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
CTSA-202ENST00000354880 PIGBQ92521 554 aa19.87■□□□□ 0.77
CTSA-202ENST00000354880 UBR2Q8IWV8 1755 aa19.87■□□□□ 0.77
CTSA-202ENST00000354880 BCL9O00512 1426 aa19.87■□□□□ 0.77
CTSA-202ENST00000354880 SNRPA1P09661 255 aaKnown RBP19.86■□□□□ 0.77
CTSA-202ENST00000354880 MVPQ14764 893 aaKnown RBP19.86■□□□□ 0.77
CTSA-202ENST00000354880 QTRT2Q9H974 415 aaKnown RBP19.86■□□□□ 0.77
CTSA-202ENST00000354880 DOT1LQ8TEK3 1739 aa19.86■□□□□ 0.77
CTSA-202ENST00000354880 C5P01031 1676 aa19.85■□□□□ 0.77
CTSA-202ENST00000354880 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
CTSA-202ENST00000354880 G2E3Q7L622 706 aa19.85■□□□□ 0.77
CTSA-202ENST00000354880 SYTL4Q96C24 671 aaPredicted RBP19.85■□□□□ 0.77
CTSA-202ENST00000354880 ABCC4O15439 1325 aa19.85■□□□□ 0.77
CTSA-202ENST00000354880 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
CTSA-202ENST00000354880 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
CTSA-202ENST00000354880 FLIIQ13045 1269 aa19.84■□□□□ 0.77
CTSA-202ENST00000354880 TMEM57Q8N5G2 664 aa19.84■□□□□ 0.77
CTSA-202ENST00000354880 CCDC136Q96JN2 1154 aa19.84■□□□□ 0.77
CTSA-202ENST00000354880 CHPF2Q9P2E5 772 aa19.84■□□□□ 0.77
CTSA-202ENST00000354880 DBF4Q9UBU7 674 aaPredicted RBP19.84■□□□□ 0.77
CTSA-202ENST00000354880 ONECUT3O60422 494 aaPredicted RBP19.83■□□□□ 0.77
CTSA-202ENST00000354880 ITPRIPQ8IWB1 547 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms