RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 CLTCQ00610 1675 aaKnown RBP18.3■□□□□ 0.52
PTBP1-201ENST00000349038 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 LRMPQ12912 555 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 GGT6Q6P531 493 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 MRPL50Q8N5N7 158 aaKnown RBP18.3■□□□□ 0.52
PTBP1-201ENST00000349038 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
PTBP1-201ENST00000349038 IBTKQ9P2D0 1353 aaPredicted RBP18.29■□□□□ 0.52
PTBP1-201ENST00000349038 FCHSD2O94868 740 aa18.29■□□□□ 0.52
PTBP1-201ENST00000349038 SRPK2P78362 688 aaKnown RBP18.29■□□□□ 0.52
PTBP1-201ENST00000349038 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
PTBP1-201ENST00000349038 PTGS1P23219 599 aa18.29■□□□□ 0.52
PTBP1-201ENST00000349038 ST7Q9NRC1 585 aa18.29■□□□□ 0.52
PTBP1-201ENST00000349038 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
PTBP1-201ENST00000349038 POGZQ7Z3K3 1410 aa18.29■□□□□ 0.52
PTBP1-201ENST00000349038 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-201ENST00000349038 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
PTBP1-201ENST00000349038 PTPRMP28827 1452 aa18.28■□□□□ 0.52
PTBP1-201ENST00000349038 VAMP4O75379 141 aa18.28■□□□□ 0.52
PTBP1-201ENST00000349038 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-201ENST00000349038 DCTN1Q14203 1278 aa18.28■□□□□ 0.52
PTBP1-201ENST00000349038 ABCC4O15439 1325 aa18.27■□□□□ 0.51
PTBP1-201ENST00000349038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTBP1-201ENST00000349038 PHF14O94880 888 aa18.25■□□□□ 0.51
PTBP1-201ENST00000349038 CYP2E1P05181 493 aaPredicted RBP18.25■□□□□ 0.51
PTBP1-201ENST00000349038 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
PTBP1-201ENST00000349038 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
PTBP1-201ENST00000349038 ARHGEF40Q8TER5 1519 aa18.25■□□□□ 0.51
PTBP1-201ENST00000349038 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
PTBP1-201ENST00000349038 TMX1Q9H3N1 280 aa18.25■□□□□ 0.51
PTBP1-201ENST00000349038 PRKAR2BP31323 418 aa18.24■□□□□ 0.51
PTBP1-201ENST00000349038 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
PTBP1-201ENST00000349038 KIF20BQ96Q89 1820 aa18.24■□□□□ 0.51
PTBP1-201ENST00000349038 REC8O95072 547 aa18.24■□□□□ 0.51
PTBP1-201ENST00000349038 TPD52L1Q16890 204 aaPredicted RBP18.24■□□□□ 0.51
PTBP1-201ENST00000349038 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
PTBP1-201ENST00000349038 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
PTBP1-201ENST00000349038 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-201ENST00000349038 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
PTBP1-201ENST00000349038 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
PTBP1-201ENST00000349038 VPS37CA5D8V6 355 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-201ENST00000349038 TNNT1P13805 278 aa18.23■□□□□ 0.51
PTBP1-201ENST00000349038 IRX5P78411 483 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-201ENST00000349038 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
PTBP1-201ENST00000349038 CCDC186Q7Z3E2 898 aa18.23■□□□□ 0.51
PTBP1-201ENST00000349038 EXOC6BQ9Y2D4 811 aa18.23■□□□□ 0.51
PTBP1-201ENST00000349038 TNNT3P45378 269 aaPredicted RBP18.22■□□□□ 0.51
PTBP1-201ENST00000349038 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
PTBP1-201ENST00000349038 FAM83GA6ND36 823 aa18.22■□□□□ 0.51
PTBP1-201ENST00000349038 MINK1Q8N4C8 1332 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-201ENST00000349038 ZNF853P0CG23 659 aa18.21■□□□□ 0.51
PTBP1-201ENST00000349038 TRIM5Q9C035 493 aa18.21■□□□□ 0.51
PTBP1-201ENST00000349038 YEATS2Q9ULM3 1422 aa18.21■□□□□ 0.51
PTBP1-201ENST00000349038 CPA1P15085 419 aa18.21■□□□□ 0.51
PTBP1-201ENST00000349038 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-201ENST00000349038 ERC2O15083 957 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 AP5Z1O43299 807 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 FAM173BQ6P4H8 233 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 LUZP1Q86V48 1076 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 KCNF1Q9H3M0 494 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 KDM4AO75164 1064 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 CCDC112Q8NEF3 446 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 NCBP1Q09161 790 aaKnown RBP18.2■□□□□ 0.5
PTBP1-201ENST00000349038 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
PTBP1-201ENST00000349038 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
PTBP1-201ENST00000349038 GNAI1P63096 354 aa18.19■□□□□ 0.5
PTBP1-201ENST00000349038 IDI1Q13907 227 aa18.19■□□□□ 0.5
PTBP1-201ENST00000349038 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
PTBP1-201ENST00000349038 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
PTBP1-201ENST00000349038 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
PTBP1-201ENST00000349038 YTHDC2Q9H6S0 1430 aaKnown RBP18.19■□□□□ 0.5
PTBP1-201ENST00000349038 SOX12O15370 315 aa18.18■□□□□ 0.5
PTBP1-201ENST00000349038 GTF2F1P35269 517 aaKnown RBP eCLIP18.18■□□□□ 0.53e-7■■■■□ 21.2
PTBP1-201ENST00000349038 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-201ENST00000349038 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
PTBP1-201ENST00000349038 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
PTBP1-201ENST00000349038 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
PTBP1-201ENST00000349038 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
PTBP1-201ENST00000349038 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-201ENST00000349038 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
PTBP1-201ENST00000349038 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
PTBP1-201ENST00000349038 CCDC183Q5T5S1 534 aa18.17■□□□□ 0.5
PTBP1-201ENST00000349038 OGFRQ9NZT2 677 aa18.17■□□□□ 0.5
PTBP1-201ENST00000349038 BRD1O95696 1058 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTBP1-201ENST00000349038 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
PTBP1-201ENST00000349038 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 RAPGEF3O95398 923 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 IPO4Q8TEX9 1081 aaKnown RBP18.16■□□□□ 0.5
PTBP1-201ENST00000349038 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
PTBP1-201ENST00000349038 MCCP23508 829 aa18.15■□□□□ 0.5
PTBP1-201ENST00000349038 DNM1Q05193 864 aaKnown RBP18.15■□□□□ 0.5
PTBP1-201ENST00000349038 FILIP1Q7Z7B0 1213 aa18.15■□□□□ 0.5
PTBP1-201ENST00000349038 GOLGA6L4A6NEF3 574 aa18.15■□□□□ 0.5
PTBP1-201ENST00000349038 SLC52A1Q9NWF4 448 aa18.14■□□□□ 0.49
PTBP1-201ENST00000349038 TMEM131LA2VDJ0 1609 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms