RNA–Protein interactions for RNA: ENST00000345868.8

SPO11-201, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPO11, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-201ENST00000345868 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
SPO11-201ENST00000345868 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
SPO11-201ENST00000345868 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
SPO11-201ENST00000345868 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
SPO11-201ENST00000345868 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
SPO11-201ENST00000345868 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.24
SPO11-201ENST00000345868 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.24
SPO11-201ENST00000345868 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SPO11-201ENST00000345868 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
SPO11-201ENST00000345868 KCNQ3O43525 872 aa16.56■□□□□ 0.24
SPO11-201ENST00000345868 SLC52A2Q9HAB3 445 aa16.56■□□□□ 0.24
SPO11-201ENST00000345868 JCADQ9P266 1359 aa16.56■□□□□ 0.24
SPO11-201ENST00000345868 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
SPO11-201ENST00000345868 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
SPO11-201ENST00000345868 MRC1P22897 1456 aa16.54■□□□□ 0.24
SPO11-201ENST00000345868 AAMPQ13685 434 aa16.54■□□□□ 0.24
SPO11-201ENST00000345868 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
SPO11-201ENST00000345868 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 HOXB7P09629 217 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
SPO11-201ENST00000345868 ABCC4O15439 1325 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 NFATC2IPQ8NCF5 419 aa16.53■□□□□ 0.24
SPO11-201ENST00000345868 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.23
SPO11-201ENST00000345868 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.23
SPO11-201ENST00000345868 STK31Q9BXU1 1019 aa16.52■□□□□ 0.23
SPO11-201ENST00000345868 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.23
SPO11-201ENST00000345868 PTPRCP08575 1304 aa16.52■□□□□ 0.23
SPO11-201ENST00000345868 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 RGS12O14924 1447 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 SLIT2O94813 1529 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 PLCH1Q4KWH8 1693 aa16.51■□□□□ 0.23
SPO11-201ENST00000345868 CABP4P57796 275 aa16.5■□□□□ 0.23
SPO11-201ENST00000345868 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
SPO11-201ENST00000345868 SIPA1L3O60292 1781 aaPredicted RBP16.5■□□□□ 0.23
SPO11-201ENST00000345868 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
SPO11-201ENST00000345868 SCN11AQ9UI33 1791 aa16.49■□□□□ 0.23
SPO11-201ENST00000345868 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
SPO11-201ENST00000345868 GIGYF1O75420 1035 aaPredicted RBP16.49■□□□□ 0.23
SPO11-201ENST00000345868 G2E3Q7L622 706 aa16.49■□□□□ 0.23
SPO11-201ENST00000345868 NRAPQ86VF7 1730 aa16.48■□□□□ 0.23
SPO11-201ENST00000345868 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
SPO11-201ENST00000345868 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
SPO11-201ENST00000345868 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
SPO11-201ENST00000345868 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
SPO11-201ENST00000345868 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
SPO11-201ENST00000345868 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
SPO11-201ENST00000345868 ZBTB40Q9NUA8 1239 aa16.47■□□□□ 0.23
SPO11-201ENST00000345868 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
SPO11-201ENST00000345868 HSPA1LP34931 641 aa16.46■□□□□ 0.23
SPO11-201ENST00000345868 FLIIQ13045 1269 aa16.46■□□□□ 0.23
SPO11-201ENST00000345868 SHANK3Q9BYB0 1731 aa16.46■□□□□ 0.23
SPO11-201ENST00000345868 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
SPO11-201ENST00000345868 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
SPO11-201ENST00000345868 INTS3Q68E01 1043 aaKnown RBP16.46■□□□□ 0.23
SPO11-201ENST00000345868 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
SPO11-201ENST00000345868 RBM19Q9Y4C8 960 aaKnown RBP16.46■□□□□ 0.23
SPO11-201ENST00000345868 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
SPO11-201ENST00000345868 IGHDP01880 384 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
SPO11-201ENST00000345868 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
SPO11-201ENST00000345868 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 LRP6O75581 1613 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
SPO11-201ENST00000345868 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
SPO11-201ENST00000345868 EXOC5O00471 708 aa16.44■□□□□ 0.22
SPO11-201ENST00000345868 NGLY1Q96IV0 654 aa16.44■□□□□ 0.22
SPO11-201ENST00000345868 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
SPO11-201ENST00000345868 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
SPO11-201ENST00000345868 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
SPO11-201ENST00000345868 F6X3S4 739 aa16.43■□□□□ 0.22
SPO11-201ENST00000345868 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
SPO11-201ENST00000345868 FNBP4Q8N3X1 1017 aaPredicted RBP16.43■□□□□ 0.22
SPO11-201ENST00000345868 FMNL2Q96PY5 1086 aa16.43■□□□□ 0.22
SPO11-201ENST00000345868 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
SPO11-201ENST00000345868 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
SPO11-201ENST00000345868 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
SPO11-201ENST00000345868 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
SPO11-201ENST00000345868 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
SPO11-201ENST00000345868 VPS72Q15906 364 aa16.41■□□□□ 0.22
SPO11-201ENST00000345868 ANXA1P04083 346 aa16.4■□□□□ 0.22
SPO11-201ENST00000345868 DDB1Q16531 1140 aa16.4■□□□□ 0.22
SPO11-201ENST00000345868 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
SPO11-201ENST00000345868 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
SPO11-201ENST00000345868 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
SPO11-201ENST00000345868 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
SPO11-201ENST00000345868 RWDD1Q9H446 243 aaPredicted RBP16.4■□□□□ 0.22
SPO11-201ENST00000345868 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
SPO11-201ENST00000345868 PDIA6Q15084 440 aa16.39■□□□□ 0.21
SPO11-201ENST00000345868 GLI3P10071 1580 aa16.38■□□□□ 0.21
SPO11-201ENST00000345868 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
SPO11-201ENST00000345868 HDAC1Q13547 482 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms