RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ELL2O00472 640 aaPredicted RBP21.06■□□□□ 0.96
CEACAM1-202ENST00000344391 IRX6P78412 446 aaPredicted RBP21.06■□□□□ 0.96
CEACAM1-202ENST00000344391 AFF2P51816 1311 aa21.06■□□□□ 0.96
CEACAM1-202ENST00000344391 TNS2Q63HR2 1409 aa21.05■□□□□ 0.96
CEACAM1-202ENST00000344391 BTBD11A6QL63 1104 aa21.05■□□□□ 0.96
CEACAM1-202ENST00000344391 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
CEACAM1-202ENST00000344391 PLIN1O60240 522 aa21.04■□□□□ 0.96
CEACAM1-202ENST00000344391 ALDH1L2Q3SY69 923 aa21.04■□□□□ 0.96
CEACAM1-202ENST00000344391 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
CEACAM1-202ENST00000344391 SSH1Q8WYL5 1049 aa21.04■□□□□ 0.96
CEACAM1-202ENST00000344391 NFATC2IPQ8NCF5 419 aa21.04■□□□□ 0.96
CEACAM1-202ENST00000344391 ERVV-2B6SEH9 535 aa21.03■□□□□ 0.96
CEACAM1-202ENST00000344391 BCL2L13Q9BXK5 485 aa21.03■□□□□ 0.96
CEACAM1-202ENST00000344391 TOGARAM1Q9Y4F4 1720 aa21.02■□□□□ 0.96
CEACAM1-202ENST00000344391 DDB1Q16531 1140 aa21.02■□□□□ 0.96
CEACAM1-202ENST00000344391 FBXO41Q8TF61 875 aa21.02■□□□□ 0.96
CEACAM1-202ENST00000344391 KCNQ3O43525 872 aa21.01■□□□□ 0.95
CEACAM1-202ENST00000344391 CABP4P57796 275 aa21.01■□□□□ 0.95
CEACAM1-202ENST00000344391 EIF4A1P60842 406 aaKnown RBP21.01■□□□□ 0.95
CEACAM1-202ENST00000344391 SMC4Q9NTJ3 1288 aa21.01■□□□□ 0.95
CEACAM1-202ENST00000344391 ATRNO75882 1429 aa21■□□□□ 0.95
CEACAM1-202ENST00000344391 SOS1Q07889 1333 aaPredicted RBP21■□□□□ 0.95
CEACAM1-202ENST00000344391 FAM98CQ17RN3 349 aaKnown RBP21■□□□□ 0.95
CEACAM1-202ENST00000344391 GLI3P10071 1580 aa21■□□□□ 0.95
CEACAM1-202ENST00000344391 BRPF1P55201 1214 aaPredicted RBP21■□□□□ 0.95
CEACAM1-202ENST00000344391 ERICH6BQ5W0A0 696 aa20.98■□□□□ 0.95
CEACAM1-202ENST00000344391 GJD4Q96KN9 370 aaPredicted RBP20.98■□□□□ 0.95
CEACAM1-202ENST00000344391 TRPC5Q9UL62 973 aaPredicted RBP20.98■□□□□ 0.95
CEACAM1-202ENST00000344391 HEG1Q9ULI3 1381 aa20.98■□□□□ 0.95
CEACAM1-202ENST00000344391 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
CEACAM1-202ENST00000344391 MRPL50Q8N5N7 158 aaKnown RBP20.97■□□□□ 0.95
CEACAM1-202ENST00000344391 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
CEACAM1-202ENST00000344391 ITGB4P16144 1822 aa20.97■□□□□ 0.95
CEACAM1-202ENST00000344391 THSD7AQ9UPZ6 1657 aa20.97■□□□□ 0.95
CEACAM1-202ENST00000344391 C20orf194Q5TEA3 1177 aa20.96■□□□□ 0.95
CEACAM1-202ENST00000344391 HOXB7P09629 217 aa20.96■□□□□ 0.95
CEACAM1-202ENST00000344391 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
CEACAM1-202ENST00000344391 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
CEACAM1-202ENST00000344391 MARCH10Q8NA82 808 aaPredicted RBP20.95■□□□□ 0.94
CEACAM1-202ENST00000344391 KIF16BQ96L93 1317 aa20.94■□□□□ 0.94
CEACAM1-202ENST00000344391 PAPPAQ13219 1627 aa20.94■□□□□ 0.94
CEACAM1-202ENST00000344391 TCERG1O14776 1098 aaKnown RBP20.94■□□□□ 0.94
CEACAM1-202ENST00000344391 CACNA1FO60840 1977 aa20.94■□□□□ 0.94
CEACAM1-202ENST00000344391 KAT6BQ8WYB5 2073 aa20.94■□□□□ 0.94
CEACAM1-202ENST00000344391 PDE3AQ14432 1141 aa20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 ZKSCAN2Q63HK3 967 aa20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 NOB1Q9ULX3 412 aaKnown RBP20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 DOT1LQ8TEK3 1739 aa20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 UBR2Q8IWV8 1755 aa20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 ONECUT3O60422 494 aaPredicted RBP20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 TTC5Q8N0Z6 440 aa20.93■□□□□ 0.94
CEACAM1-202ENST00000344391 GIGYF1O75420 1035 aaPredicted RBP20.92■□□□□ 0.94
CEACAM1-202ENST00000344391 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
CEACAM1-202ENST00000344391 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
CEACAM1-202ENST00000344391 CCDC30Q5VVM6 783 aa20.91■□□□□ 0.94
CEACAM1-202ENST00000344391 ATF7IPQ6VMQ6 1270 aa20.9■□□□□ 0.94
CEACAM1-202ENST00000344391 PIGBQ92521 554 aa20.9■□□□□ 0.94
CEACAM1-202ENST00000344391 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
CEACAM1-202ENST00000344391 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
CEACAM1-202ENST00000344391 TNNQ9UQP3 1299 aa20.9■□□□□ 0.94
CEACAM1-202ENST00000344391 HDGFL1Q5TGJ6 251 aa20.89■□□□□ 0.94
CEACAM1-202ENST00000344391 EXOC6Q8TAG9 804 aa20.89■□□□□ 0.94
CEACAM1-202ENST00000344391 ARHGAP45Q92619 1136 aa20.89■□□□□ 0.94
CEACAM1-202ENST00000344391 CRBNQ96SW2 442 aa20.89■□□□□ 0.94
CEACAM1-202ENST00000344391 BCL9O00512 1426 aa20.89■□□□□ 0.94
CEACAM1-202ENST00000344391 C5P01031 1676 aa20.89■□□□□ 0.93
CEACAM1-202ENST00000344391 A0A0G2JS52 829 aa20.89■□□□□ 0.93
CEACAM1-202ENST00000344391 SLC4A2P04920 1241 aa20.89■□□□□ 0.93
CEACAM1-202ENST00000344391 TRIM27P14373 513 aa20.89■□□□□ 0.93
CEACAM1-202ENST00000344391 MYT1Q01538 1121 aa20.89■□□□□ 0.93
CEACAM1-202ENST00000344391 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
CEACAM1-202ENST00000344391 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
CEACAM1-202ENST00000344391 MS4A1P11836 297 aa20.88■□□□□ 0.93
CEACAM1-202ENST00000344391 PANK1Q8TE04 598 aa20.88■□□□□ 0.93
CEACAM1-202ENST00000344391 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
CEACAM1-202ENST00000344391 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
CEACAM1-202ENST00000344391 EIF2S2P20042 333 aaKnown RBP20.87■□□□□ 0.93
CEACAM1-202ENST00000344391 ZNF772Q68DY9 489 aaPredicted RBP20.87■□□□□ 0.93
CEACAM1-202ENST00000344391 NECTIN2Q92692 538 aa20.87■□□□□ 0.93
CEACAM1-202ENST00000344391 RLBP1P12271 317 aa20.86■□□□□ 0.93
CEACAM1-202ENST00000344391 PRIM1P49642 420 aaKnown RBP20.86■□□□□ 0.93
CEACAM1-202ENST00000344391 DZIP1LQ8IYY4 767 aaKnown RBP20.86■□□□□ 0.93
CEACAM1-202ENST00000344391 CLUAP1Q96AJ1 413 aa20.86■□□□□ 0.93
CEACAM1-202ENST00000344391 SNRPA1P09661 255 aaKnown RBP20.86■□□□□ 0.93
CEACAM1-202ENST00000344391 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
CEACAM1-202ENST00000344391 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
CEACAM1-202ENST00000344391 LAMB4A4D0S4 1761 aa20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 FTSJ3Q8IY81 847 aaKnown RBP20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 SEPT12Q8IYM1 358 aa20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 SYTL4Q96C24 671 aaPredicted RBP20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 API5Q9BZZ5 524 aaKnown RBP20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 ASAP1Q9ULH1 1129 aa20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 PTPRCP08575 1304 aa20.84■□□□□ 0.93
CEACAM1-202ENST00000344391 G2E3Q7L622 706 aa20.83■□□□□ 0.93
CEACAM1-202ENST00000344391 ACSBG1Q96GR2 724 aa20.83■□□□□ 0.93
CEACAM1-202ENST00000344391 COG6Q9Y2V7 657 aa20.83■□□□□ 0.93
CEACAM1-202ENST00000344391 CHPF2Q9P2E5 772 aa20.82■□□□□ 0.92
CEACAM1-202ENST00000344391 DBF4Q9UBU7 674 aaPredicted RBP20.82■□□□□ 0.92
CEACAM1-202ENST00000344391 RGS12O14924 1447 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms