RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 FAM210AQ96ND0 272 aa14.09□□□□□ -0.15
TPX2-202ENST00000340513 KDM4CQ9H3R0 1056 aa14.09□□□□□ -0.15
TPX2-202ENST00000340513 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
TPX2-202ENST00000340513 VEZTQ9HBM0 779 aa14.09□□□□□ -0.15
TPX2-202ENST00000340513 CCDC27Q2M243 656 aa14.08□□□□□ -0.15
TPX2-202ENST00000340513 RINLQ6ZS11 566 aa14.08□□□□□ -0.15
TPX2-202ENST00000340513 RPUSD2Q8IZ73 545 aaKnown RBP14.08□□□□□ -0.15
TPX2-202ENST00000340513 ARL10Q8N8L6 244 aa14.08□□□□□ -0.15
TPX2-202ENST00000340513 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.15
TPX2-202ENST00000340513 TRIM6Q9C030 488 aaPredicted RBP14.08□□□□□ -0.15
TPX2-202ENST00000340513 GDPD2Q9HCC8 539 aa14.08□□□□□ -0.15
TPX2-202ENST00000340513 TRMT1Q9NXH9 659 aaKnown RBP14.08□□□□□ -0.15
TPX2-202ENST00000340513 CCDC18Q5T9S5 1454 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 CCP110O43303 1012 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 KDM4AO75164 1064 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 FHOD3Q2V2M9 1422 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 IRX1P78414 480 aaPredicted RBP14.08□□□□□ -0.16
TPX2-202ENST00000340513 SNX21Q969T3 373 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 RMI1Q9H9A7 625 aa14.08□□□□□ -0.16
TPX2-202ENST00000340513 SPATS2LQ9NUQ6 558 aaKnown RBP14.08□□□□□ -0.16
TPX2-202ENST00000340513 ACTN2P35609 894 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 CCDC186Q7Z3E2 898 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 TRIM74Q86UV6 250 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 TRIM73Q86UV7 250 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 LIG3P49916 1009 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 ATP2B2Q01814 1243 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 ARHGAP29Q52LW3 1261 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 SUGP1Q8IWZ8 645 aaKnown RBP14.07□□□□□ -0.16
TPX2-202ENST00000340513 CTCFLQ8NI51 663 aaPredicted RBP14.07□□□□□ -0.16
TPX2-202ENST00000340513 MIEF2Q96C03 454 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 PTPRGP23470 1445 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 GNL2Q13823 731 aaKnown RBP14.07□□□□□ -0.16
TPX2-202ENST00000340513 ANKRD45Q5TZF3 282 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 TBC1D22AQ8WUA7 517 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 MRFAP1Q9Y605 127 aa14.07□□□□□ -0.16
TPX2-202ENST00000340513 PLEKHG2Q9H7P9 1386 aa14.06□□□□□ -0.16
TPX2-202ENST00000340513 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
TPX2-202ENST00000340513 PES1O00541 588 aaKnown RBP14.06□□□□□ -0.16
TPX2-202ENST00000340513 CLCN6P51797 869 aa14.06□□□□□ -0.16
TPX2-202ENST00000340513 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
TPX2-202ENST00000340513 WWC2Q6AWC2 1192 aa14.06□□□□□ -0.16
TPX2-202ENST00000340513 FOXR1Q6PIV2 292 aa14.06□□□□□ -0.16
TPX2-202ENST00000340513 SNX1Q13596 522 aa14.05□□□□□ -0.16
TPX2-202ENST00000340513 SKAP2O75563 359 aaPredicted RBP14.05□□□□□ -0.16
TPX2-202ENST00000340513 SLU7O95391 586 aaKnown RBP14.05□□□□□ -0.16
TPX2-202ENST00000340513 MTA1Q13330 715 aa14.05□□□□□ -0.16
TPX2-202ENST00000340513 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
TPX2-202ENST00000340513 ERO1AQ96HE7 468 aa14.05□□□□□ -0.16
TPX2-202ENST00000340513 KDM2AQ9Y2K7 1162 aa14.05□□□□□ -0.16
TPX2-202ENST00000340513 SEC31AO94979 1220 aaKnown RBP14.05□□□□□ -0.16
TPX2-202ENST00000340513 TNNQ9UQP3 1299 aa14.05□□□□□ -0.16
TPX2-202ENST00000340513 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
TPX2-202ENST00000340513 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 KIF2AO00139 706 aaPredicted RBP14.04□□□□□ -0.16
TPX2-202ENST00000340513 ERLIN2O94905 339 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 ABCD1P33897 745 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 SMC1AQ14683 1233 aaKnown RBP14.04□□□□□ -0.16
TPX2-202ENST00000340513 RBBP5Q15291 538 aaKnown RBP14.04□□□□□ -0.16
TPX2-202ENST00000340513 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 FHOD1Q9Y613 1164 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 PLB1Q6P1J6 1458 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 CARMIL2Q6F5E8 1435 aa14.04□□□□□ -0.16
TPX2-202ENST00000340513 ELF1P32519 619 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 CASTP20810 708 aaKnown RBP14.03□□□□□ -0.16
TPX2-202ENST00000340513 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
TPX2-202ENST00000340513 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 GNL3LQ9NVN8 582 aaKnown RBP14.03□□□□□ -0.16
TPX2-202ENST00000340513 MYBL2P10244 700 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 UBXN4Q92575 508 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
TPX2-202ENST00000340513 CENPHQ9H3R5 247 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 ADAM21Q9UKJ8 722 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 UACAQ9BZF9 1416 aa14.03□□□□□ -0.16
TPX2-202ENST00000340513 PAX3P23760 479 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 NAA25Q14CX7 972 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 UVSSAQ2YD98 709 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 FBXW10Q5XX13 1052 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 ANKRD18AQ8IVF6 992 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 SH3GL3Q99963 347 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 VPS18Q9P253 973 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.16
TPX2-202ENST00000340513 C1QTNF12Q5T7M4 302 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 ATL2Q8NHH9 583 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 TMEM165Q9HC07 324 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 TADA2BQ86TJ2 420 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 MPHOSPH9Q99550 1183 aa14.02□□□□□ -0.17
TPX2-202ENST00000340513 USP47Q96K76 1375 aa14.01□□□□□ -0.17
TPX2-202ENST00000340513 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
TPX2-202ENST00000340513 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
TPX2-202ENST00000340513 NEDD9Q14511 834 aa14.01□□□□□ -0.17
TPX2-202ENST00000340513 ZBTB10Q96DT7 871 aa14.01□□□□□ -0.17
TPX2-202ENST00000340513 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.01□□□□□ -0.17
TPX2-202ENST00000340513 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms