RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 NR1H3Q13133 447 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 WDR44Q5JSH3 913 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 NSFL1CQ9UNZ2 370 aaKnown RBP6.69□□□□□ -1.34
XRCC4-202ENST00000338635 PCDHB11Q9Y5F2 797 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 F11P03951 625 aa6.68□□□□□ -1.34
XRCC4-202ENST00000338635 TAS1R3Q7RTX0 852 aa6.68□□□□□ -1.34
XRCC4-202ENST00000338635 NUCKS1Q9H1E3 243 aaKnown RBP6.68□□□□□ -1.34
XRCC4-202ENST00000338635 OSBPL3Q9H4L5 887 aa6.68□□□□□ -1.34
XRCC4-202ENST00000338635 MKL2Q9ULH7 1088 aa6.68□□□□□ -1.34
XRCC4-202ENST00000338635 WASLO00401 505 aaPredicted RBP6.67□□□□□ -1.34
XRCC4-202ENST00000338635 TRAK2O60296 914 aa6.67□□□□□ -1.34
XRCC4-202ENST00000338635 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
XRCC4-202ENST00000338635 ARHGEF10LQ9HCE6 1279 aa6.67□□□□□ -1.34
XRCC4-202ENST00000338635 ZNF592Q92610 1267 aa6.66□□□□□ -1.34
XRCC4-202ENST00000338635 ZNF330Q9Y3S2 320 aaPredicted RBP6.66□□□□□ -1.34
XRCC4-202ENST00000338635 C1QTNF9BB2RNN3 333 aa6.65□□□□□ -1.34
XRCC4-202ENST00000338635 OIP5O43482 229 aa6.65□□□□□ -1.34
XRCC4-202ENST00000338635 CENPCQ03188 943 aa6.65□□□□□ -1.34
XRCC4-202ENST00000338635 RAB6BQ9NRW1 208 aa6.65□□□□□ -1.34
XRCC4-202ENST00000338635 GNRH1P01148 92 aa6.65□□□□□ -1.35
XRCC4-202ENST00000338635 PHKA2P46019 1235 aa6.65□□□□□ -1.35
XRCC4-202ENST00000338635 CNKSR1Q969H4 720 aa6.65□□□□□ -1.35
XRCC4-202ENST00000338635 ESYT1Q9BSJ8 1104 aa6.65□□□□□ -1.35
XRCC4-202ENST00000338635 CFHR5Q9BXR6 569 aa6.65□□□□□ -1.35
XRCC4-202ENST00000338635 MAP2K3P46734 347 aa6.64□□□□□ -1.35
XRCC4-202ENST00000338635 OXCT2Q9BYC2 517 aaPredicted RBP6.64□□□□□ -1.35
XRCC4-202ENST00000338635 GPAMQ9HCL2 828 aa6.64□□□□□ -1.35
XRCC4-202ENST00000338635 IL2RAP01589 272 aa6.63□□□□□ -1.35
XRCC4-202ENST00000338635 GRIN2CQ14957 1233 aa6.63□□□□□ -1.35
XRCC4-202ENST00000338635 ZFP64Q9NPA5 681 aa6.63□□□□□ -1.35
XRCC4-202ENST00000338635 THBS1P07996 1170 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 DOC2BQ14184 412 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 CD163Q86VB7 1156 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 BANK1Q8NDB2 785 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 KLRG1Q96E93 195 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 BCANQ96GW7 911 aa6.62□□□□□ -1.35
XRCC4-202ENST00000338635 ZSCAN10Q96SZ4 725 aaPredicted RBP6.62□□□□□ -1.35
XRCC4-202ENST00000338635 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-202ENST00000338635 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 NBPF11Q86T75 865 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 XAGE2Q96GT9 111 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 CDCA7Q9BWT1 371 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-202ENST00000338635 CEP126Q9P2H0 1117 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 HRH3Q9Y5N1 445 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 NDUFB9Q9Y6M9 179 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 A0A1B0GTH6 734 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 GPR37L1O60883 481 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 GTF2E1P29083 439 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-202ENST00000338635 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-202ENST00000338635 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-202ENST00000338635 CCDC85AQ96PX6 553 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-202ENST00000338635 RRAGCQ9HB90 399 aa6.61□□□□□ -1.35
XRCC4-202ENST00000338635 SHISA8B8ZZ34 492 aa6.6□□□□□ -1.35
XRCC4-202ENST00000338635 GNASQ5JWF2 1037 aa6.6□□□□□ -1.35
XRCC4-202ENST00000338635 TMEM214Q6NUQ4 689 aaKnown RBP6.6□□□□□ -1.35
XRCC4-202ENST00000338635 C1orf229Q6ZS94 237 aaPredicted RBP6.6□□□□□ -1.35
XRCC4-202ENST00000338635 MTMR14Q8NCE2 650 aa6.6□□□□□ -1.35
XRCC4-202ENST00000338635 CSB-PGBD3P0DP91 1061 aa6.59□□□□□ -1.35
XRCC4-202ENST00000338635 C4orf17Q53FE4 359 aa6.59□□□□□ -1.35
XRCC4-202ENST00000338635 PGBD3Q8N328 593 aa6.59□□□□□ -1.35
XRCC4-202ENST00000338635 EDARADDQ8WWZ3 215 aa6.59□□□□□ -1.35
XRCC4-202ENST00000338635 SUV39H2Q9H5I1 410 aa6.59□□□□□ -1.35
XRCC4-202ENST00000338635 SNRKQ9NRH2 765 aa6.59□□□□□ -1.35
XRCC4-202ENST00000338635 SOCS7O14512 581 aa6.58□□□□□ -1.36
XRCC4-202ENST00000338635 MSX1P28360 303 aa6.58□□□□□ -1.36
XRCC4-202ENST00000338635 CHRNA4P43681 627 aa6.58□□□□□ -1.36
XRCC4-202ENST00000338635 UBAP2LQ14157 1087 aaKnown RBP6.58□□□□□ -1.36
XRCC4-202ENST00000338635 LBRQ14739 615 aaKnown RBP6.58□□□□□ -1.36
XRCC4-202ENST00000338635 ESCO1Q5FWF5 840 aa6.58□□□□□ -1.36
XRCC4-202ENST00000338635 FHDC1Q9C0D6 1143 aaPredicted RBP6.58□□□□□ -1.36
XRCC4-202ENST00000338635 RUBCNLQ9H714 662 aa6.58□□□□□ -1.36
XRCC4-202ENST00000338635 GDF2Q9UK05 429 aaPredicted RBP6.58□□□□□ -1.36
XRCC4-202ENST00000338635 TSGA10IPQ3SY00 556 aa6.57□□□□□ -1.36
XRCC4-202ENST00000338635 APBB1O00213 710 aa6.57□□□□□ -1.36
XRCC4-202ENST00000338635 C2CD2LO14523 706 aa6.57□□□□□ -1.36
XRCC4-202ENST00000338635 GOLGA6L1Q8N7Z2 621 aa6.57□□□□□ -1.36
XRCC4-202ENST00000338635 BMP4P12644 408 aa6.56□□□□□ -1.36
XRCC4-202ENST00000338635 CTBSQ01459 385 aa6.56□□□□□ -1.36
XRCC4-202ENST00000338635 USP4Q13107 963 aa6.56□□□□□ -1.36
XRCC4-202ENST00000338635 EFHC2Q5JST6 749 aa6.56□□□□□ -1.36
XRCC4-202ENST00000338635 ABHD17AQ96GS6 310 aa6.56□□□□□ -1.36
XRCC4-202ENST00000338635 ATXN7L1Q9ULK2 861 aaPredicted RBP6.56□□□□□ -1.36
XRCC4-202ENST00000338635 BNIP3LO60238 219 aa6.55□□□□□ -1.36
XRCC4-202ENST00000338635 COBLO75128 1261 aa6.55□□□□□ -1.36
XRCC4-202ENST00000338635 STAU1O95793 577 aaKnown RBP6.55□□□□□ -1.36
XRCC4-202ENST00000338635 AMPD1P23109 780 aa6.55□□□□□ -1.36
XRCC4-202ENST00000338635 LINC00114Q6XXX2 140 aa6.55□□□□□ -1.36
XRCC4-202ENST00000338635 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
XRCC4-202ENST00000338635 FGFR3P22607 806 aa6.54□□□□□ -1.36
XRCC4-202ENST00000338635 PHTF2Q8N3S3 785 aa6.54□□□□□ -1.36
XRCC4-202ENST00000338635 RHBDD1Q8TEB9 315 aa6.54□□□□□ -1.36
XRCC4-202ENST00000338635 ETNK1Q9HBU6 452 aa6.54□□□□□ -1.36
XRCC4-202ENST00000338635 NDFIP2Q9NV92 336 aa6.54□□□□□ -1.36
XRCC4-202ENST00000338635 GGA1Q9UJY5 639 aa6.54□□□□□ -1.36
XRCC4-202ENST00000338635 PIK3R2O00459 728 aa6.53□□□□□ -1.36
XRCC4-202ENST00000338635 DOLKQ9UPQ8 538 aa6.53□□□□□ -1.36
XRCC4-202ENST00000338635 HOXB4P17483 251 aaPredicted RBP6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms