RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 SPATA31A5Q5VU36 1347 aa18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 SPATA31A7Q8IWB4 1347 aa18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 TCERG1O14776 1098 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 FNBP4Q8N3X1 1017 aaPredicted RBP18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-201ENST00000338399 KCNQ3O43525 872 aa18.93■□□□□ 0.62
CDK5RAP3-201ENST00000338399 NFATC2IPQ8NCF5 419 aa18.93■□□□□ 0.62
CDK5RAP3-201ENST00000338399 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
CDK5RAP3-201ENST00000338399 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-201ENST00000338399 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-201ENST00000338399 EXOC5O00471 708 aa18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 EIF4A1P60842 406 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 CDCA7Q9BWT1 371 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 NOB1Q9ULX3 412 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 MRC1P22897 1456 aa18.91■□□□□ 0.62
CDK5RAP3-201ENST00000338399 BRPF1P55201 1214 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 CABP4P57796 275 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 PDE3AQ14432 1141 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 USP21Q9UK80 565 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 KIF16BQ96L93 1317 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 VPS72Q15906 364 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 PANK1Q8TE04 598 aa18.9■□□□□ 0.62
CDK5RAP3-201ENST00000338399 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.89■□□□□ 0.61
CDK5RAP3-201ENST00000338399 SLC39A6Q13433 755 aa18.88■□□□□ 0.61
CDK5RAP3-201ENST00000338399 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
CDK5RAP3-201ENST00000338399 ERVV-2B6SEH9 535 aa18.88■□□□□ 0.61
CDK5RAP3-201ENST00000338399 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
CDK5RAP3-201ENST00000338399 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
CDK5RAP3-201ENST00000338399 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
CDK5RAP3-201ENST00000338399 IPO8O15397 1037 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-201ENST00000338399 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
CDK5RAP3-201ENST00000338399 TOGARAM1Q9Y4F4 1720 aa18.87■□□□□ 0.61
CDK5RAP3-201ENST00000338399 RLBP1P12271 317 aa18.86■□□□□ 0.61
CDK5RAP3-201ENST00000338399 TRIM27P14373 513 aa18.86■□□□□ 0.61
CDK5RAP3-201ENST00000338399 DDB1Q16531 1140 aa18.86■□□□□ 0.61
CDK5RAP3-201ENST00000338399 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
CDK5RAP3-201ENST00000338399 AFF2P51816 1311 aa18.86■□□□□ 0.61
CDK5RAP3-201ENST00000338399 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
CDK5RAP3-201ENST00000338399 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-201ENST00000338399 DZIP1LQ8IYY4 767 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-201ENST00000338399 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
CDK5RAP3-201ENST00000338399 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 MS4A1P11836 297 aa18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 CCDC30Q5VVM6 783 aa18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 HOXB7P09629 217 aa18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
CDK5RAP3-201ENST00000338399 HEG1Q9ULI3 1381 aa18.83■□□□□ 0.61
CDK5RAP3-201ENST00000338399 EIF2S2P20042 333 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 TTC5Q8N0Z6 440 aa18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 ARHGAP45Q92619 1136 aa18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 STK31Q9BXU1 1019 aa18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 CACNA1FO60840 1977 aa18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 ITGB4P16144 1822 aa18.83■□□□□ 0.6
CDK5RAP3-201ENST00000338399 GIGYF1O75420 1035 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-201ENST00000338399 PRAMEF22A3QJZ6 481 aa18.81■□□□□ 0.6
CDK5RAP3-201ENST00000338399 ZNF496Q96IT1 587 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-201ENST00000338399 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
CDK5RAP3-201ENST00000338399 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
CDK5RAP3-201ENST00000338399 G2E3Q7L622 706 aa18.8■□□□□ 0.6
CDK5RAP3-201ENST00000338399 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-201ENST00000338399 C5P01031 1676 aa18.79■□□□□ 0.6
CDK5RAP3-201ENST00000338399 MVPQ14764 893 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-201ENST00000338399 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
CDK5RAP3-201ENST00000338399 FMNL2Q96PY5 1086 aa18.79■□□□□ 0.6
CDK5RAP3-201ENST00000338399 API5Q9BZZ5 524 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-201ENST00000338399 PAPPAQ13219 1627 aa18.79■□□□□ 0.6
CDK5RAP3-201ENST00000338399 DOT1LQ8TEK3 1739 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 GLI3P10071 1580 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 A0A0G2JS52 829 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 MYT1Q01538 1121 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 CHMP4AQ9BY43 222 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 PTPRCP08575 1304 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
CDK5RAP3-201ENST00000338399 PIGBQ92521 554 aa18.77■□□□□ 0.6
CDK5RAP3-201ENST00000338399 TRPC5Q9UL62 973 aaPredicted RBP18.77■□□□□ 0.6
CDK5RAP3-201ENST00000338399 ATRNO75882 1429 aa18.77■□□□□ 0.6
CDK5RAP3-201ENST00000338399 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
CDK5RAP3-201ENST00000338399 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-201ENST00000338399 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
CDK5RAP3-201ENST00000338399 ABCC4O15439 1325 aa18.76■□□□□ 0.59
CDK5RAP3-201ENST00000338399 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-201ENST00000338399 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
CDK5RAP3-201ENST00000338399 RGS12O14924 1447 aa18.75■□□□□ 0.59
CDK5RAP3-201ENST00000338399 PRIM1P49642 420 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-201ENST00000338399 FLIIQ13045 1269 aa18.75■□□□□ 0.59
CDK5RAP3-201ENST00000338399 BCL9O00512 1426 aa18.75■□□□□ 0.59
CDK5RAP3-201ENST00000338399 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
CDK5RAP3-201ENST00000338399 ANXA1P04083 346 aa18.74■□□□□ 0.59
CDK5RAP3-201ENST00000338399 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms