RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 MRC2Q9UBG0 1479 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
SEC23B-202ENST00000336714 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
SEC23B-202ENST00000336714 NUP160Q12769 1436 aa13.17□□□□□ -0.3
SEC23B-202ENST00000336714 SEC31AO94979 1220 aaKnown RBP13.16□□□□□ -0.3
SEC23B-202ENST00000336714 TULP2O00295 520 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 DIAPH1O60610 1272 aaKnown RBP13.16□□□□□ -0.3
SEC23B-202ENST00000336714 SKILP12757 684 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 CUL4AQ13619 759 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 MAP3K11Q16584 847 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 ESYT1Q9BSJ8 1104 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 MBIPQ9NS73 344 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 DACT1Q9NYF0 836 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
SEC23B-202ENST00000336714 KANK1Q14678 1352 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 RAPGEF6Q8TEU7 1601 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 GTF2A1P52655 376 aaPredicted RBP13.16□□□□□ -0.3
SEC23B-202ENST00000336714 PDE1AP54750 535 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
SEC23B-202ENST00000336714 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 IL25Q9H293 177 aa13.16□□□□□ -0.3
SEC23B-202ENST00000336714 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 F13A1P00488 732 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■□□ 16.4
SEC23B-202ENST00000336714 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
SEC23B-202ENST00000336714 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 APPP05067 770 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 CYP2C19P33261 490 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 MCM2P49736 904 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 RASSF4Q9H2L5 321 aa13.15□□□□□ -0.3
SEC23B-202ENST00000336714 ZNF518AQ6AHZ1 1483 aa13.15□□□□□ -0.31
SEC23B-202ENST00000336714 F6X3S4 739 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 FOSBP53539 338 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
SEC23B-202ENST00000336714 LARGE1O95461 756 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 ZNF165P49910 485 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 ZNF75DP51815 510 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 CEP85Q6P2H3 762 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
SEC23B-202ENST00000336714 FUCA2Q9BTY2 467 aa13.14□□□□□ -0.31
SEC23B-202ENST00000336714 CLCN6P51797 869 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 BICD2Q8TD16 824 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 SLU7O95391 586 aaKnown RBP13.13□□□□□ -0.31
SEC23B-202ENST00000336714 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 GJB2P29033 226 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 AK2P54819 239 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
SEC23B-202ENST00000336714 SMARCE1Q969G3 411 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
SEC23B-202ENST00000336714 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
SEC23B-202ENST00000336714 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
SEC23B-202ENST00000336714 PTPRTO14522 1441 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 GOLGA6L19H0YKK7 550 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
SEC23B-202ENST00000336714 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
SEC23B-202ENST00000336714 RPAP1Q9BWH6 1393 aaPredicted RBP13.12□□□□□ -0.31
SEC23B-202ENST00000336714 MYO5CQ9NQX4 1742 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
SEC23B-202ENST00000336714 LMAN1P49257 510 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
SEC23B-202ENST00000336714 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
SEC23B-202ENST00000336714 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
SEC23B-202ENST00000336714 CROCC2H7BZ55 1655 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 MYO1CO00159 1063 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
SEC23B-202ENST00000336714 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
SEC23B-202ENST00000336714 TTC6Q86TZ1 520 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 JPH4Q96JJ6 628 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 E2F4Q16254 413 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 NUTM1Q86Y26 1132 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 RAD50Q92878 1312 aa13.11□□□□□ -0.31
SEC23B-202ENST00000336714 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 MYOM1P52179 1685 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
SEC23B-202ENST00000336714 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
SEC23B-202ENST00000336714 CHMLP26374 656 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms