RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
BEST3-203ENST00000331471 C5P01031 1676 aa12.17□□□□□ -0.46
BEST3-203ENST00000331471 NUBP1P53384 320 aa12.17□□□□□ -0.46
BEST3-203ENST00000331471 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
BEST3-203ENST00000331471 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
BEST3-203ENST00000331471 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
BEST3-203ENST00000331471 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
BEST3-203ENST00000331471 PALLDQ8WX93 1383 aa12.16□□□□□ -0.46
BEST3-203ENST00000331471 ANKRD26Q9UPS8 1709 aa12.16□□□□□ -0.46
BEST3-203ENST00000331471 CYP27B1O15528 508 aa12.16□□□□□ -0.46
BEST3-203ENST00000331471 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
BEST3-203ENST00000331471 COL23A1Q86Y22 540 aaPredicted RBP12.16□□□□□ -0.46
BEST3-203ENST00000331471 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
BEST3-203ENST00000331471 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
BEST3-203ENST00000331471 UTRNP46939 3433 aa12.15□□□□□ -0.46
BEST3-203ENST00000331471 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
BEST3-203ENST00000331471 ZNF784Q8NCA9 323 aaPredicted RBP12.15□□□□□ -0.46
BEST3-203ENST00000331471 SMARCC1Q92922 1105 aaPredicted RBP12.15□□□□□ -0.46
BEST3-203ENST00000331471 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
BEST3-203ENST00000331471 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
BEST3-203ENST00000331471 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
BEST3-203ENST00000331471 CHD4Q14839 1912 aa12.14□□□□□ -0.47
BEST3-203ENST00000331471 ITGB4P16144 1822 aa12.14□□□□□ -0.47
BEST3-203ENST00000331471 NCAPD2Q15021 1401 aa12.13□□□□□ -0.47
BEST3-203ENST00000331471 FLAD1Q8NFF5 587 aa12.13□□□□□ -0.47
BEST3-203ENST00000331471 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
BEST3-203ENST00000331471 AK7Q96M32 723 aa12.13□□□□□ -0.47
BEST3-203ENST00000331471 EYA1Q99502 592 aa12.13□□□□□ -0.47
BEST3-203ENST00000331471 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
BEST3-203ENST00000331471 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
BEST3-203ENST00000331471 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
BEST3-203ENST00000331471 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
BEST3-203ENST00000331471 CENPBP07199 599 aaPredicted RBP12.11□□□□□ -0.47
BEST3-203ENST00000331471 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
BEST3-203ENST00000331471 IFNL2Q8IZJ0 200 aa12.11□□□□□ -0.47
BEST3-203ENST00000331471 PIGBQ92521 554 aa12.11□□□□□ -0.47
BEST3-203ENST00000331471 TMOD3Q9NYL9 352 aa12.11□□□□□ -0.47
BEST3-203ENST00000331471 PHF14O94880 888 aa12.11□□□□□ -0.47
BEST3-203ENST00000331471 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
BEST3-203ENST00000331471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.47
BEST3-203ENST00000331471 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
BEST3-203ENST00000331471 PHKG2P15735 406 aa12.1□□□□□ -0.47
BEST3-203ENST00000331471 EIF4A2Q14240 407 aaKnown RBP12.1□□□□□ -0.47
BEST3-203ENST00000331471 LOC102724428A0A0B4J2F2 783 aa12.09□□□□□ -0.47
BEST3-203ENST00000331471 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
BEST3-203ENST00000331471 SIK1P57059 783 aa12.09□□□□□ -0.47
BEST3-203ENST00000331471 PANK3Q9H999 370 aa12.09□□□□□ -0.47
BEST3-203ENST00000331471 GSE1Q14687 1217 aa12.08□□□□□ -0.48
BEST3-203ENST00000331471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
BEST3-203ENST00000331471 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
BEST3-203ENST00000331471 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
BEST3-203ENST00000331471 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
BEST3-203ENST00000331471 ASAP1Q9ULH1 1129 aa12.07□□□□□ -0.48
BEST3-203ENST00000331471 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
BEST3-203ENST00000331471 UBR3Q6ZT12 1888 aa12.07□□□□□ -0.48
BEST3-203ENST00000331471 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
BEST3-203ENST00000331471 SSFA2P28290 1259 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 SMIM5Q71RC9 77 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 GNPATO15228 680 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
BEST3-203ENST00000331471 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
BEST3-203ENST00000331471 MORC1Q86VD1 984 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
BEST3-203ENST00000331471 ATG3Q9NT62 314 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 PLEKHG2Q9H7P9 1386 aa12.06□□□□□ -0.48
BEST3-203ENST00000331471 GOLGB1Q14789 3259 aaKnown RBP12.05□□□□□ -0.48
BEST3-203ENST00000331471 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
BEST3-203ENST00000331471 ITPK1Q13572 414 aa12.05□□□□□ -0.48
BEST3-203ENST00000331471 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
BEST3-203ENST00000331471 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
BEST3-203ENST00000331471 C1QTNF8P60827 252 aa12.04□□□□□ -0.48
BEST3-203ENST00000331471 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
BEST3-203ENST00000331471 ERVV-2B6SEH9 535 aa12.03□□□□□ -0.48
BEST3-203ENST00000331471 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
BEST3-203ENST00000331471 ZNF530Q6P9A1 599 aaPredicted RBP12.03□□□□□ -0.48
BEST3-203ENST00000331471 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
BEST3-203ENST00000331471 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
BEST3-203ENST00000331471 CABP4P57796 275 aa12.02□□□□□ -0.48
BEST3-203ENST00000331471 C1orf141Q5JVX7 400 aa12.02□□□□□ -0.48
BEST3-203ENST00000331471 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.48
BEST3-203ENST00000331471 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.48
BEST3-203ENST00000331471 WWC3Q9ULE0 1092 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
BEST3-203ENST00000331471 KDRP35968 1356 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
BEST3-203ENST00000331471 MTHFSP49914 203 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 TRAPPC3LQ5T215 181 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
BEST3-203ENST00000331471 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
BEST3-203ENST00000331471 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
BEST3-203ENST00000331471 MMP10P09238 476 aa11.99□□□□□ -0.49
BEST3-203ENST00000331471 SLC4A9Q96Q91 983 aa11.99□□□□□ -0.49
BEST3-203ENST00000331471 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
BEST3-203ENST00000331471 RC3H1Q5TC82 1133 aaKnown RBP11.98□□□□□ -0.49
BEST3-203ENST00000331471 CNTNAP4Q9C0A0 1308 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms